RNA–Protein interactions for RNA: ENST00000227503.13

SF1-201, Transcript of splicing factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SF1, Length 2,850 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-201ENST00000227503 R3HDMLQ9H3Y0 253 aa14.33□□□□□ -0.12
SF1-201ENST00000227503 CLK4Q9HAZ1 481 aaKnown RBP14.33□□□□□ -0.12
SF1-201ENST00000227503 PRPF19Q9UMS4 504 aaKnown RBP14.33□□□□□ -0.12
SF1-201ENST00000227503 TNFSF13BQ9Y275 285 aa14.33□□□□□ -0.12
SF1-201ENST00000227503 C2CD4BA6NLJ0 364 aa14.32□□□□□ -0.12
SF1-201ENST00000227503 LACTBL1A8MY62 500 aa14.32□□□□□ -0.12
SF1-201ENST00000227503 KCNU1A8MYU2 1149 aa14.32□□□□□ -0.12
SF1-201ENST00000227503 TFE3P19532 575 aaPredicted RBP14.32□□□□□ -0.12
SF1-201ENST00000227503 SOX11P35716 441 aa14.32□□□□□ -0.12
SF1-201ENST00000227503 PPARGP37231 505 aaPredicted RBP14.32□□□□□ -0.12
SF1-201ENST00000227503 HSPA13P48723 471 aa14.32□□□□□ -0.12
SF1-201ENST00000227503 HARS2P49590 506 aaKnown RBP14.32□□□□□ -0.12
SF1-201ENST00000227503 PTK2BQ14289 1009 aa14.32□□□□□ -0.12
SF1-201ENST00000227503 DCLRE1AQ6PJP8 1040 aa14.32□□□□□ -0.12
SF1-201ENST00000227503 ZC3H7AQ8IWR0 971 aaKnown RBP14.32□□□□□ -0.12
SF1-201ENST00000227503 NAT16Q8N8M0 369 aa14.32□□□□□ -0.12
SF1-201ENST00000227503 CASP10Q92851 521 aa14.32□□□□□ -0.12
SF1-201ENST00000227503 SLCO4A1Q96BD0 722 aa14.32□□□□□ -0.12
SF1-201ENST00000227503 CNPY3Q9BT09 278 aa14.32□□□□□ -0.12
SF1-201ENST00000227503 DUS2Q9NX74 493 aaKnown RBP14.32□□□□□ -0.12
SF1-201ENST00000227503 PCDHA11Q9Y5I1 949 aa14.32□□□□□ -0.12
SF1-201ENST00000227503 FADS3Q9Y5Q0 445 aa14.32□□□□□ -0.12
SF1-201ENST00000227503 WDR90Q96KV7 1748 aa14.32□□□□□ -0.12
SF1-201ENST00000227503 C1orf232A0A0U1RR37 186 aa14.32□□□□□ -0.12
SF1-201ENST00000227503 ZNF839A8K0R7 811 aa14.32□□□□□ -0.12
SF1-201ENST00000227503 ITGB3P05106 788 aa14.32□□□□□ -0.12
SF1-201ENST00000227503 GRIA3P42263 894 aa14.32□□□□□ -0.12
SF1-201ENST00000227503 CLCN2P51788 898 aa14.32□□□□□ -0.12
SF1-201ENST00000227503 ESRRGP62508 458 aa14.32□□□□□ -0.12
SF1-201ENST00000227503 STILQ15468 1287 aa14.32□□□□□ -0.12
SF1-201ENST00000227503 JADE1Q6IE81 842 aa14.32□□□□□ -0.12
SF1-201ENST00000227503 TTC33Q6PID6 262 aaPredicted RBP14.32□□□□□ -0.12
SF1-201ENST00000227503 PLPPR4Q7Z2D5 763 aa14.32□□□□□ -0.12
SF1-201ENST00000227503 ACVR1CQ8NER5 493 aa14.32□□□□□ -0.12
SF1-201ENST00000227503 UBA3Q8TBC4 463 aa14.32□□□□□ -0.12
SF1-201ENST00000227503 SLC39A3Q9BRY0 314 aa14.32□□□□□ -0.12
SF1-201ENST00000227503 MUC3BQ9H195 1237 aa14.32□□□□□ -0.12
SF1-201ENST00000227503 TMEM98Q9Y2Y6 226 aa14.32□□□□□ -0.12
SF1-201ENST00000227503 SOCS7O14512 581 aa14.32□□□□□ -0.12
SF1-201ENST00000227503 MCF2P10911 925 aa14.32□□□□□ -0.12
SF1-201ENST00000227503 CYP3A5P20815 502 aa14.32□□□□□ -0.12
SF1-201ENST00000227503 GPD1P21695 349 aa14.32□□□□□ -0.12
SF1-201ENST00000227503 IL4RP24394 825 aa14.32□□□□□ -0.12
SF1-201ENST00000227503 MLLT10P55197 1068 aa14.32□□□□□ -0.12
SF1-201ENST00000227503 ZNF829Q3KNS6 432 aaPredicted RBP14.32□□□□□ -0.12
SF1-201ENST00000227503 PERM1Q5SV97 790 aa14.32□□□□□ -0.12
SF1-201ENST00000227503 MAP1SQ66K74 1059 aaPredicted RBP14.32□□□□□ -0.12
SF1-201ENST00000227503 GALNT18Q6P9A2 607 aa14.32□□□□□ -0.12
SF1-201ENST00000227503 ZBTB49Q6ZSB9 765 aa14.32□□□□□ -0.12
SF1-201ENST00000227503 EXOC8Q8IYI6 725 aa14.32□□□□□ -0.12
SF1-201ENST00000227503 RXFP2Q8WXD0 754 aa14.32□□□□□ -0.12
SF1-201ENST00000227503 FBXL20Q96IG2 436 aa14.32□□□□□ -0.12
SF1-201ENST00000227503 RNF157Q96PX1 679 aa14.32□□□□□ -0.12
SF1-201ENST00000227503 OSBPL11Q9BXB4 747 aa14.32□□□□□ -0.12
SF1-201ENST00000227503 MFHAS1Q9Y4C4 1052 aa14.32□□□□□ -0.12
SF1-201ENST00000227503 PCDHB12Q9Y5F1 795 aa14.32□□□□□ -0.12
SF1-201ENST00000227503 A0A0G2JMZ2 1700 aa14.31□□□□□ -0.12
SF1-201ENST00000227503 LRRC37A2A6NM11 1700 aa14.31□□□□□ -0.12
SF1-201ENST00000227503 E7ENX8 843 aa14.31□□□□□ -0.12
SF1-201ENST00000227503 FZD9O00144 591 aa14.31□□□□□ -0.12
SF1-201ENST00000227503 MYL4P12829 197 aa14.31□□□□□ -0.12
SF1-201ENST00000227503 GRK2P25098 689 aa14.31□□□□□ -0.12
SF1-201ENST00000227503 MGAT1P26572 445 aa14.31□□□□□ -0.12
SF1-201ENST00000227503 GLRBP48167 497 aa14.31□□□□□ -0.12
SF1-201ENST00000227503 BCAR1P56945 870 aa14.31□□□□□ -0.12
SF1-201ENST00000227503 TFDP2Q14188 446 aa14.31□□□□□ -0.12
SF1-201ENST00000227503 RAB39AQ14964 217 aa14.31□□□□□ -0.12
SF1-201ENST00000227503 TMEM132AQ24JP5 1023 aa14.31□□□□□ -0.12
SF1-201ENST00000227503 FAM47CQ5HY64 1035 aa14.31□□□□□ -0.12
SF1-201ENST00000227503 CELF3Q5SZQ8 465 aaKnown RBP14.31□□□□□ -0.12
SF1-201ENST00000227503 TRPM4Q8TD43 1214 aa14.31□□□□□ -0.12
SF1-201ENST00000227503 RTP4Q96DX8 246 aa14.31□□□□□ -0.12
SF1-201ENST00000227503 GATA5Q9BWX5 397 aaPredicted RBP14.31□□□□□ -0.12
SF1-201ENST00000227503 SPATC1LQ9H0A9 340 aa14.31□□□□□ -0.12
SF1-201ENST00000227503 HIPK3Q9H422 1215 aa14.31□□□□□ -0.12
SF1-201ENST00000227503 VRTNQ9H8Y1 702 aa14.31□□□□□ -0.12
SF1-201ENST00000227503 POLR1BQ9H9Y6 1135 aa14.31□□□□□ -0.12
SF1-201ENST00000227503 ZFYVE28Q9HCC9 887 aa14.31□□□□□ -0.12
SF1-201ENST00000227503 ST14Q9Y5Y6 855 aa14.31□□□□□ -0.12
SF1-201ENST00000227503 CCDC78A2IDD5 438 aa14.31□□□□□ -0.12
SF1-201ENST00000227503 A6NL46 340 aa14.31□□□□□ -0.12
SF1-201ENST00000227503 STAG3L1P0CL83 205 aa14.31□□□□□ -0.12
SF1-201ENST00000227503 VDRP11473 427 aa14.31□□□□□ -0.12
SF1-201ENST00000227503 SERPINB9P50453 376 aa14.31□□□□□ -0.12
SF1-201ENST00000227503 CLCN3P51790 818 aa14.31□□□□□ -0.12
SF1-201ENST00000227503 GBE1Q04446 702 aa14.31□□□□□ -0.12
SF1-201ENST00000227503 ZBED5Q49AG3 693 aa14.31□□□□□ -0.12
SF1-201ENST00000227503 WDR78Q5VTH9 848 aa14.31□□□□□ -0.12
SF1-201ENST00000227503 METTL21CQ5VZV1 264 aa14.31□□□□□ -0.12
SF1-201ENST00000227503 PGAM4Q8N0Y7 254 aa14.31□□□□□ -0.12
SF1-201ENST00000227503 C17orf50Q8WW18 174 aa14.31□□□□□ -0.12
SF1-201ENST00000227503 HEXIM2Q96MH2 286 aaKnown RBP14.31□□□□□ -0.12
SF1-201ENST00000227503 NPLQ9BXD5 320 aaPredicted RBP14.31□□□□□ -0.12
SF1-201ENST00000227503 CYP3A43Q9HB55 503 aa14.31□□□□□ -0.12
SF1-201ENST00000227503 SMOXQ9NWM0 555 aa14.31□□□□□ -0.12
SF1-201ENST00000227503 CDY2AQ9Y6F7 541 aa14.31□□□□□ -0.12
SF1-201ENST00000227503 CDY1Q9Y6F8 540 aa14.31□□□□□ -0.12
SF1-201ENST00000227503 C9IYK1 514 aa14.3□□□□□ -0.12
SF1-201ENST00000227503 GOLGA8TH3BQL2 631 aa14.3□□□□□ -0.12
SF1-201ENST00000227503 TK2O00142 265 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms