RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 B3GAT3O94766 335 aa22.32■■□□□ 1.16
SMARCD2-201ENST00000225742 NCF2P19878 526 aaPredicted RBP22.32■■□□□ 1.16
SMARCD2-201ENST00000225742 CCR1P32246 355 aa22.32■■□□□ 1.16
SMARCD2-201ENST00000225742 NKX3-2P78367 333 aa22.32■■□□□ 1.16
SMARCD2-201ENST00000225742 TSPY1Q01534 308 aa22.32■■□□□ 1.16
SMARCD2-201ENST00000225742 TUSC3Q13454 348 aa22.32■■□□□ 1.16
SMARCD2-201ENST00000225742 DSC3Q14574 896 aa22.32■■□□□ 1.16
SMARCD2-201ENST00000225742 USP10Q14694 798 aaKnown RBP22.32■■□□□ 1.16
SMARCD2-201ENST00000225742 DLG2Q15700 870 aa22.32■■□□□ 1.16
SMARCD2-201ENST00000225742 BTBD8Q5XKL5 378 aa22.32■■□□□ 1.16
SMARCD2-201ENST00000225742 CD300LGQ6UXG3 332 aa22.32■■□□□ 1.16
SMARCD2-201ENST00000225742 RAPH1Q70E73 1250 aa22.32■■□□□ 1.16
SMARCD2-201ENST00000225742 ZNF184Q99676 751 aaPredicted RBP22.32■■□□□ 1.16
SMARCD2-201ENST00000225742 PAAF1Q9BRP4 392 aa22.32■■□□□ 1.16
SMARCD2-201ENST00000225742 RTKNQ9BST9 563 aa22.32■■□□□ 1.16
SMARCD2-201ENST00000225742 UBE2OQ9C0C9 1292 aaKnown RBP22.32■■□□□ 1.16
SMARCD2-201ENST00000225742 TASP1Q9H6P5 420 aa22.32■■□□□ 1.16
SMARCD2-201ENST00000225742 UBP1Q9NZI7 540 aa22.32■■□□□ 1.16
SMARCD2-201ENST00000225742 ARHGAP26Q9UNA1 814 aa22.32■■□□□ 1.16
SMARCD2-201ENST00000225742 E2F8A0AVK6 867 aa22.31■■□□□ 1.16
SMARCD2-201ENST00000225742 MEI4A8MW99 385 aa22.31■■□□□ 1.16
SMARCD2-201ENST00000225742 PALM2-AKAP2B1ALY0 433 aaPredicted RBP22.31■■□□□ 1.16
SMARCD2-201ENST00000225742 DDHD2O94830 711 aa22.31■■□□□ 1.16
SMARCD2-201ENST00000225742 CTSHP09668 335 aa22.31■■□□□ 1.16
SMARCD2-201ENST00000225742 COX4I1P13073 169 aa22.31■■□□□ 1.16
SMARCD2-201ENST00000225742 GLDCP23378 1020 aa22.31■■□□□ 1.16
SMARCD2-201ENST00000225742 CRABP2P29373 138 aa22.31■■□□□ 1.16
SMARCD2-201ENST00000225742 ADSLP30566 484 aaPredicted RBP22.31■■□□□ 1.16
SMARCD2-201ENST00000225742 PSEN1P49768 467 aa22.31■■□□□ 1.16
SMARCD2-201ENST00000225742 SLC25A3Q00325 362 aa22.31■■□□□ 1.16
SMARCD2-201ENST00000225742 PRKAA1Q13131 559 aa22.31■■□□□ 1.16
SMARCD2-201ENST00000225742 AFMIDQ63HM1 303 aa22.31■■□□□ 1.16
SMARCD2-201ENST00000225742 OVOS1Q6IE37 1185 aa22.31■■□□□ 1.16
SMARCD2-201ENST00000225742 STYXQ8WUJ0 223 aa22.31■■□□□ 1.16
SMARCD2-201ENST00000225742 RSPH1Q8WYR4 309 aa22.31■■□□□ 1.16
SMARCD2-201ENST00000225742 SPC25Q9HBM1 224 aa22.31■■□□□ 1.16
SMARCD2-201ENST00000225742 TMLHEQ9NVH6 421 aa22.31■■□□□ 1.16
SMARCD2-201ENST00000225742 WASF2Q9Y6W5 498 aa22.31■■□□□ 1.16
SMARCD2-201ENST00000225742 MAFKO60675 156 aa22.31■■□□□ 1.16
SMARCD2-201ENST00000225742 PAGE1O75459 146 aa22.31■■□□□ 1.16
SMARCD2-201ENST00000225742 PAMP19021 973 aa22.31■■□□□ 1.16
SMARCD2-201ENST00000225742 ADRA1AP35348 466 aa22.31■■□□□ 1.16
SMARCD2-201ENST00000225742 GMPRP36959 345 aa22.31■■□□□ 1.16
SMARCD2-201ENST00000225742 KLF10Q13118 480 aa22.31■■□□□ 1.16
SMARCD2-201ENST00000225742 VWA5B1Q5TIE3 1220 aa22.31■■□□□ 1.16
SMARCD2-201ENST00000225742 USP33Q8TEY7 942 aa22.31■■□□□ 1.16
SMARCD2-201ENST00000225742 CNDP1Q96KN2 507 aa22.31■■□□□ 1.16
SMARCD2-201ENST00000225742 SUSD3Q96L08 255 aa22.31■■□□□ 1.16
SMARCD2-201ENST00000225742 PRKD2Q9BZL6 878 aa22.31■■□□□ 1.16
SMARCD2-201ENST00000225742 AGO3Q9H9G7 860 aaKnown RBP22.31■■□□□ 1.16
SMARCD2-201ENST00000225742 S100A14Q9HCY8 104 aa22.31■■□□□ 1.16
SMARCD2-201ENST00000225742 ACOT9Q9Y305 439 aa22.31■■□□□ 1.16
SMARCD2-201ENST00000225742 TCAF1Q9Y4C2 921 aa22.31■■□□□ 1.16
SMARCD2-201ENST00000225742 A0A0U1RQF3 1178 aa22.3■■□□□ 1.16
SMARCD2-201ENST00000225742 MATN2O00339 956 aa22.3■■□□□ 1.16
SMARCD2-201ENST00000225742 TNPO2O14787 897 aaKnown RBP22.3■■□□□ 1.16
SMARCD2-201ENST00000225742 HDAC3O15379 428 aa22.3■■□□□ 1.16
SMARCD2-201ENST00000225742 BRCC3P46736 316 aa22.3■■□□□ 1.16
SMARCD2-201ENST00000225742 RPL14P50914 215 aaKnown RBP22.3■■□□□ 1.16
SMARCD2-201ENST00000225742 USP4Q13107 963 aa22.3■■□□□ 1.16
SMARCD2-201ENST00000225742 GSTA3Q16772 222 aa22.3■■□□□ 1.16
SMARCD2-201ENST00000225742 DENND5AQ6IQ26 1287 aa22.3■■□□□ 1.16
SMARCD2-201ENST00000225742 TMEM151AQ8N4L1 468 aa22.3■■□□□ 1.16
SMARCD2-201ENST00000225742 POU5F2Q8N7G0 328 aa22.3■■□□□ 1.16
SMARCD2-201ENST00000225742 TRPV1Q8NER1 839 aa22.3■■□□□ 1.16
SMARCD2-201ENST00000225742 PDCD6IPQ8WUM4 868 aaKnown RBP22.3■■□□□ 1.16
SMARCD2-201ENST00000225742 CCDC28BQ9BUN5 200 aa22.3■■□□□ 1.16
SMARCD2-201ENST00000225742 SIK2Q9H0K1 926 aa22.3■■□□□ 1.16
SMARCD2-201ENST00000225742 VCXQ9H320 206 aa22.3■■□□□ 1.16
SMARCD2-201ENST00000225742 TCF7L2Q9NQB0 619 aa22.3■■□□□ 1.16
SMARCD2-201ENST00000225742 NLRC5Q86WI3 1866 aa22.3■■□□□ 1.16
SMARCD2-201ENST00000225742 TDRD15B5MCY1 1934 aaKnown RBP22.3■■□□□ 1.16
SMARCD2-201ENST00000225742 WASH4PA8MWX3 477 aa22.29■■□□□ 1.16
SMARCD2-201ENST00000225742 KPNA2P52292 529 aaKnown RBP22.29■■□□□ 1.16
SMARCD2-201ENST00000225742 CXCL17Q6UXB2 119 aa22.29■■□□□ 1.16
SMARCD2-201ENST00000225742 SETD3Q86TU7 594 aaPredicted RBP22.29■■□□□ 1.16
SMARCD2-201ENST00000225742 LRRTM3Q86VH5 581 aa22.29■■□□□ 1.16
SMARCD2-201ENST00000225742 OR10T2Q8NGX3 314 aa22.29■■□□□ 1.16
SMARCD2-201ENST00000225742 FATE1Q969F0 183 aa22.29■■□□□ 1.16
SMARCD2-201ENST00000225742 FICDQ9BVA6 458 aa22.29■■□□□ 1.16
SMARCD2-201ENST00000225742 SLC39A8Q9C0K1 460 aa22.29■■□□□ 1.16
SMARCD2-201ENST00000225742 TBC1D13Q9NVG8 400 aa22.29■■□□□ 1.16
SMARCD2-201ENST00000225742 PADI3Q9ULW8 664 aa22.29■■□□□ 1.16
SMARCD2-201ENST00000225742 SUFUQ9UMX1 484 aa22.29■■□□□ 1.16
SMARCD2-201ENST00000225742 RUVBL2Q9Y230 463 aaKnown RBP22.29■■□□□ 1.16
SMARCD2-201ENST00000225742 A0A087X1B8 175 aa22.29■■□□□ 1.16
SMARCD2-201ENST00000225742 AHSGP02765 367 aa22.29■■□□□ 1.16
SMARCD2-201ENST00000225742 SLC35E2BP0CK96 405 aa22.29■■□□□ 1.16
SMARCD2-201ENST00000225742 THRAP10827 490 aa22.29■■□□□ 1.16
SMARCD2-201ENST00000225742 ITGAXP20702 1163 aa22.29■■□□□ 1.16
SMARCD2-201ENST00000225742 ABCG1P45844 678 aa22.29■■□□□ 1.16
SMARCD2-201ENST00000225742 ARCN1P48444 511 aaKnown RBP22.29■■□□□ 1.16
SMARCD2-201ENST00000225742 RAB10P61026 200 aa22.29■■□□□ 1.16
SMARCD2-201ENST00000225742 SLC9B1Q4ZJI4 515 aa22.29■■□□□ 1.16
SMARCD2-201ENST00000225742 SEL1L3Q68CR1 1132 aa22.29■■□□□ 1.16
SMARCD2-201ENST00000225742 KIAA0930Q6ICG6 404 aaPredicted RBP22.29■■□□□ 1.16
SMARCD2-201ENST00000225742 ARHGAP36Q6ZRI8 547 aa22.29■■□□□ 1.16
SMARCD2-201ENST00000225742 SPATA2LQ8IUW3 424 aaPredicted RBP22.29■■□□□ 1.16
SMARCD2-201ENST00000225742 CPSF7Q8N684 471 aaKnown RBP22.29■■□□□ 1.16
SMARCD2-201ENST00000225742 ACVR1CQ8NER5 493 aa22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms