RNA–Protein interactions for RNA: ENST00000223129.8

RPA3-201, Transcript of replication protein A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPA3, Length 2,020 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-201ENST00000223129 ZNF185O15231 689 aa15.27■□□□□ 0.04
RPA3-201ENST00000223129 SIN3BO75182 1162 aa15.27■□□□□ 0.04
RPA3-201ENST00000223129 VASPP50552 380 aaPredicted RBP15.27■□□□□ 0.04
RPA3-201ENST00000223129 ETF1P62495 437 aaKnown RBP15.27■□□□□ 0.04
RPA3-201ENST00000223129 SLC10A7Q0GE19 358 aa15.27■□□□□ 0.04
RPA3-201ENST00000223129 AP1B1Q10567 949 aa15.27■□□□□ 0.04
RPA3-201ENST00000223129 PDK1Q15118 436 aa15.27■□□□□ 0.04
RPA3-201ENST00000223129 E2F5Q15329 346 aa15.27■□□□□ 0.04
RPA3-201ENST00000223129 HNRNPA1L2Q32P51 320 aaKnown RBP15.27■□□□□ 0.04
RPA3-201ENST00000223129 INO80DQ53TQ3 878 aaPredicted RBP15.27■□□□□ 0.04
RPA3-201ENST00000223129 NYAP1Q6ZVC0 841 aa15.27■□□□□ 0.04
RPA3-201ENST00000223129 HDAC11Q96DB2 347 aa15.27■□□□□ 0.04
RPA3-201ENST00000223129 C1QTNF1Q9BXJ1 281 aa15.27■□□□□ 0.04
RPA3-201ENST00000223129 TM6SF2Q9BZW4 377 aa15.27■□□□□ 0.04
RPA3-201ENST00000223129 PRSS16Q9NQE7 514 aa15.27■□□□□ 0.04
RPA3-201ENST00000223129 SUN2Q9UH99 717 aa15.27■□□□□ 0.04
RPA3-201ENST00000223129 R3HDM2Q9Y2K5 976 aaKnown RBP15.27■□□□□ 0.04
RPA3-201ENST00000223129 CTAGE9A4FU28 777 aa15.27■□□□□ 0.03
RPA3-201ENST00000223129 SYNCRIPO60506 623 aaKnown RBP15.27■□□□□ 0.03
RPA3-201ENST00000223129 FGGP02679 453 aa15.27■□□□□ 0.03
RPA3-201ENST00000223129 CCNCP24863 283 aa15.27■□□□□ 0.03
RPA3-201ENST00000223129 CXCL12P48061 93 aa15.27■□□□□ 0.03
RPA3-201ENST00000223129 GEMIN4P57678 1058 aaKnown RBP15.27■□□□□ 0.03
RPA3-201ENST00000223129 LBRQ14739 615 aaKnown RBP15.27■□□□□ 0.03
RPA3-201ENST00000223129 C9orf64Q5T6V5 341 aa15.27■□□□□ 0.03
RPA3-201ENST00000223129 C22orf39Q6P5X5 142 aa15.27■□□□□ 0.03
RPA3-201ENST00000223129 BZW1Q7L1Q6 419 aaKnown RBP15.27■□□□□ 0.03
RPA3-201ENST00000223129 LRRC49Q8IUZ0 686 aa15.27■□□□□ 0.03
RPA3-201ENST00000223129 DTWD2Q8NBA8 298 aa15.27■□□□□ 0.03
RPA3-201ENST00000223129 PBKQ96KB5 322 aa15.27■□□□□ 0.03
RPA3-201ENST00000223129 TSGA13Q96PP4 275 aa15.27■□□□□ 0.03
RPA3-201ENST00000223129 HHIPQ96QV1 700 aa15.27■□□□□ 0.03
RPA3-201ENST00000223129 SLC6A17Q9H1V8 727 aa15.27■□□□□ 0.03
RPA3-201ENST00000223129 CD248Q9HCU0 757 aa15.27■□□□□ 0.03
RPA3-201ENST00000223129 SMARCAL1Q9NZC9 954 aa15.27■□□□□ 0.03
RPA3-201ENST00000223129 SLC8A2Q9UPR5 921 aa15.27■□□□□ 0.03
RPA3-201ENST00000223129 CUL9Q8IWT3 2517 aa15.27■□□□□ 0.03
RPA3-201ENST00000223129 CACNA1IQ9P0X4 2223 aa15.27■□□□□ 0.03
RPA3-201ENST00000223129 CXorf51AA0A1B0GTR3 108 aa15.26■□□□□ 0.03
RPA3-201ENST00000223129 PPP1R12AO14974 1030 aaPredicted RBP15.26■□□□□ 0.03
RPA3-201ENST00000223129 RRP9O43818 475 aaKnown RBP15.26■□□□□ 0.03
RPA3-201ENST00000223129 CLCN6P51797 869 aa15.26■□□□□ 0.03
RPA3-201ENST00000223129 PPIDQ08752 370 aaKnown RBP15.26■□□□□ 0.03
RPA3-201ENST00000223129 NOMO1Q15155 1222 aa15.26■□□□□ 0.03
RPA3-201ENST00000223129 PAPD7Q5XG87 772 aaKnown RBP15.26■□□□□ 0.03
RPA3-201ENST00000223129 TSSK4Q6SA08 328 aa15.26■□□□□ 0.03
RPA3-201ENST00000223129 CCDC13Q8IYE1 715 aa15.26■□□□□ 0.03
RPA3-201ENST00000223129 TSEN2Q8NCE0 465 aaKnown RBP15.26■□□□□ 0.03
RPA3-201ENST00000223129 EXOC2Q96KP1 924 aa15.26■□□□□ 0.03
RPA3-201ENST00000223129 LRFN3Q9BTN0 628 aa15.26■□□□□ 0.03
RPA3-201ENST00000223129 CKAP5Q14008 2032 aa15.26■□□□□ 0.03
RPA3-201ENST00000223129 EDDM13A0A1B0GTR0 161 aa15.26■□□□□ 0.03
RPA3-201ENST00000223129 TCRBV21S2A2A0A5A6 115 aa15.26■□□□□ 0.03
RPA3-201ENST00000223129 KCNK1O00180 336 aa15.26■□□□□ 0.03
RPA3-201ENST00000223129 MATN3O15232 486 aa15.26■□□□□ 0.03
RPA3-201ENST00000223129 TERF1P54274 439 aa15.26■□□□□ 0.03
RPA3-201ENST00000223129 EIF3EP60228 445 aaKnown RBP15.26■□□□□ 0.03
RPA3-201ENST00000223129 CAMK2GQ13555 558 aaPredicted RBP15.26■□□□□ 0.03
RPA3-201ENST00000223129 STARD3Q14849 445 aa15.26■□□□□ 0.03
RPA3-201ENST00000223129 LONRF2Q1L5Z9 754 aa15.26■□□□□ 0.03
RPA3-201ENST00000223129 ATXN7L2Q5T6C5 722 aaPredicted RBP15.26■□□□□ 0.03
RPA3-201ENST00000223129 TMCO4Q5TGY1 634 aa15.26■□□□□ 0.03
RPA3-201ENST00000223129 C1orf210Q8IVY1 113 aa15.26■□□□□ 0.03
RPA3-201ENST00000223129 STK40Q8N2I9 435 aa15.26■□□□□ 0.03
RPA3-201ENST00000223129 RASGEF1CQ8N431 466 aa15.26■□□□□ 0.03
RPA3-201ENST00000223129 OR2A12Q8NGT7 310 aa15.26■□□□□ 0.03
RPA3-201ENST00000223129 TFB1MQ8WVM0 346 aaKnown RBP15.26■□□□□ 0.03
RPA3-201ENST00000223129 ATG4AQ8WYN0 398 aa15.26■□□□□ 0.03
RPA3-201ENST00000223129 ZNF419Q96HQ0 510 aaPredicted RBP15.26■□□□□ 0.03
RPA3-201ENST00000223129 IER2Q9BTL4 223 aa15.26■□□□□ 0.03
RPA3-201ENST00000223129 CEP41Q9BYV8 373 aa15.26■□□□□ 0.03
RPA3-201ENST00000223129 CEP44Q9C0F1 390 aa15.26■□□□□ 0.03
RPA3-201ENST00000223129 TTC24A2A3L6 582 aaPredicted RBP15.25■□□□□ 0.03
RPA3-201ENST00000223129 H7C0C1 242 aa15.25■□□□□ 0.03
RPA3-201ENST00000223129 MUSKO15146 869 aa15.25■□□□□ 0.03
RPA3-201ENST00000223129 ZNF500O60304 480 aaPredicted RBP15.25■□□□□ 0.03
RPA3-201ENST00000223129 CASQ1P31415 396 aa15.25■□□□□ 0.03
RPA3-201ENST00000223129 RGRP47804 291 aa15.25■□□□□ 0.03
RPA3-201ENST00000223129 ATP5OP48047 213 aa15.25■□□□□ 0.03
RPA3-201ENST00000223129 PXNP49023 591 aaPredicted RBP15.25■□□□□ 0.03
RPA3-201ENST00000223129 CCR3P51677 355 aa15.25■□□□□ 0.03
RPA3-201ENST00000223129 COPAP53621 1224 aa15.25■□□□□ 0.03
RPA3-201ENST00000223129 RHOAP61586 193 aa15.25■□□□□ 0.03
RPA3-201ENST00000223129 SIX1Q15475 284 aaPredicted RBP15.25■□□□□ 0.03
RPA3-201ENST00000223129 MARC1Q5VT66 337 aa15.25■□□□□ 0.03
RPA3-201ENST00000223129 TIGD7Q6NT04 549 aaPredicted RBP15.25■□□□□ 0.03
RPA3-201ENST00000223129 MAMSTRQ6ZN01 415 aa15.25■□□□□ 0.03
RPA3-201ENST00000223129 DPY19L3Q6ZPD9 716 aa15.25■□□□□ 0.03
RPA3-201ENST00000223129 CACUL1Q86Y37 369 aa15.25■□□□□ 0.03
RPA3-201ENST00000223129 PCDH20Q8N6Y1 951 aaKnown RBP15.25■□□□□ 0.03
RPA3-201ENST00000223129 CHST14Q8NCH0 376 aa15.25■□□□□ 0.03
RPA3-201ENST00000223129 OR6K2Q8NGY2 324 aa15.25■□□□□ 0.03
RPA3-201ENST00000223129 NSMCE1Q8WV22 266 aa15.25■□□□□ 0.03
RPA3-201ENST00000223129 C1orf54Q8WWF1 131 aa15.25■□□□□ 0.03
RPA3-201ENST00000223129 CASKIN2Q8WXE0 1202 aa15.25■□□□□ 0.03
RPA3-201ENST00000223129 ZNF599Q96NL3 588 aa15.25■□□□□ 0.03
RPA3-201ENST00000223129 CINPQ9BW66 212 aaPredicted RBP15.25■□□□□ 0.03
RPA3-201ENST00000223129 MKRN2Q9H000 416 aaKnown RBP15.25■□□□□ 0.03
RPA3-201ENST00000223129 POLMQ9NP87 494 aaPredicted RBP15.25■□□□□ 0.03
RPA3-201ENST00000223129 SEPT10Q9P0V9 454 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms