RNA–Protein interactions for RNA: ENST00000221222.15

HOMER3-201, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,384 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-201ENST00000221222 HEMGNQ9BXL5 484 aa24.08■■□□□ 1.45
HOMER3-201ENST00000221222 CEP44Q9C0F1 390 aa24.08■■□□□ 1.45
HOMER3-201ENST00000221222 SP110Q9HB58 689 aa24.08■■□□□ 1.45
HOMER3-201ENST00000221222 GVINP1Q7Z2Y8 2422 aa24.07■■□□□ 1.44
HOMER3-201ENST00000221222 EDDM13A0A1B0GTR0 161 aa24.07■■□□□ 1.44
HOMER3-201ENST00000221222 TARSL2A2RTX5 802 aaKnown RBP24.07■■□□□ 1.44
HOMER3-201ENST00000221222 K7ERQ8 282 aa24.07■■□□□ 1.44
HOMER3-201ENST00000221222 LAMTOR5O43504 91 aa24.07■■□□□ 1.44
HOMER3-201ENST00000221222 SMAD6O43541 496 aaKnown RBP24.07■■□□□ 1.44
HOMER3-201ENST00000221222 NR2C2P49116 596 aa24.07■■□□□ 1.44
HOMER3-201ENST00000221222 KIAA1211LQ6NV74 962 aa24.07■■□□□ 1.44
HOMER3-201ENST00000221222 ZNF366Q8N895 744 aa24.07■■□□□ 1.44
HOMER3-201ENST00000221222 PTPRN2Q92932 1015 aa24.07■■□□□ 1.44
HOMER3-201ENST00000221222 OLFM3Q96PB7 478 aa24.07■■□□□ 1.44
HOMER3-201ENST00000221222 TSGA13Q96PP4 275 aa24.07■■□□□ 1.44
HOMER3-201ENST00000221222 UBA2Q9UBT2 640 aaPredicted RBP24.07■■□□□ 1.44
HOMER3-201ENST00000221222 HEY1Q9Y5J3 304 aa24.07■■□□□ 1.44
HOMER3-201ENST00000221222 ACTL7AQ9Y615 435 aa24.07■■□□□ 1.44
HOMER3-201ENST00000221222 EP300Q09472 2414 aaPredicted RBP24.06■■□□□ 1.44
HOMER3-201ENST00000221222 K7ESF4 209 aa24.06■■□□□ 1.44
HOMER3-201ENST00000221222 SYNCRIPO60506 623 aaKnown RBP24.06■■□□□ 1.44
HOMER3-201ENST00000221222 C22orf39Q6P5X5 142 aa24.06■■□□□ 1.44
HOMER3-201ENST00000221222 NPNTQ6UXI9 565 aa24.06■■□□□ 1.44
HOMER3-201ENST00000221222 MAML2Q8IZL2 1156 aaPredicted RBP24.06■■□□□ 1.44
HOMER3-201ENST00000221222 CAMKK1Q8N5S9 505 aa24.06■■□□□ 1.44
HOMER3-201ENST00000221222 FATE1Q969F0 183 aa24.06■■□□□ 1.44
HOMER3-201ENST00000221222 ISG20Q96AZ6 181 aaKnown RBP24.06■■□□□ 1.44
HOMER3-201ENST00000221222 HDAC11Q96DB2 347 aa24.06■■□□□ 1.44
HOMER3-201ENST00000221222 TRIM44Q96DX7 344 aaPredicted RBP24.06■■□□□ 1.44
HOMER3-201ENST00000221222 ZNF599Q96NL3 588 aa24.06■■□□□ 1.44
HOMER3-201ENST00000221222 POLMQ9NP87 494 aaPredicted RBP24.06■■□□□ 1.44
HOMER3-201ENST00000221222 PRSS16Q9NQE7 514 aa24.06■■□□□ 1.44
HOMER3-201ENST00000221222 WDR87Q6ZQQ6 2873 aa24.06■■□□□ 1.44
HOMER3-201ENST00000221222 APOC4-APOC2K7ER74 178 aa24.05■■□□□ 1.44
HOMER3-201ENST00000221222 KCNK3O14649 394 aa24.05■■□□□ 1.44
HOMER3-201ENST00000221222 ZNF821O75541 412 aaPredicted RBP24.05■■□□□ 1.44
HOMER3-201ENST00000221222 TJP3O95049 919 aa24.05■■□□□ 1.44
HOMER3-201ENST00000221222 MAP3K6O95382 1288 aa24.05■■□□□ 1.44
HOMER3-201ENST00000221222 APOC2P02655 101 aa24.05■■□□□ 1.44
HOMER3-201ENST00000221222 SP9P0CG40 484 aa24.05■■□□□ 1.44
HOMER3-201ENST00000221222 C7P10643 843 aa24.05■■□□□ 1.44
HOMER3-201ENST00000221222 HOXA6P31267 233 aa24.05■■□□□ 1.44
HOMER3-201ENST00000221222 RFTN1Q14699 578 aaPredicted RBP24.05■■□□□ 1.44
HOMER3-201ENST00000221222 ACCSLQ4AC99 568 aa24.05■■□□□ 1.44
HOMER3-201ENST00000221222 C9orf64Q5T6V5 341 aa24.05■■□□□ 1.44
HOMER3-201ENST00000221222 LEKR1Q6ZMV7 388 aa24.05■■□□□ 1.44
HOMER3-201ENST00000221222 BZW1Q7L1Q6 419 aaKnown RBP24.05■■□□□ 1.44
HOMER3-201ENST00000221222 C17orf53Q8N3J3 647 aaPredicted RBP24.05■■□□□ 1.44
HOMER3-201ENST00000221222 MTG2Q9H4K7 406 aa24.05■■□□□ 1.44
HOMER3-201ENST00000221222 FBRSQ9HAH7 460 aa24.05■■□□□ 1.44
HOMER3-201ENST00000221222 FBXO4Q9UKT5 387 aa24.05■■□□□ 1.44
HOMER3-201ENST00000221222 ENC1O14682 589 aa24.04■■□□□ 1.44
HOMER3-201ENST00000221222 SIN3BO75182 1162 aa24.04■■□□□ 1.44
HOMER3-201ENST00000221222 TMCC1O94876 653 aa24.04■■□□□ 1.44
HOMER3-201ENST00000221222 PEX11BO96011 259 aa24.04■■□□□ 1.44
HOMER3-201ENST00000221222 TDGF1P13385 188 aa24.04■■□□□ 1.44
HOMER3-201ENST00000221222 PECAM1P16284 738 aaPredicted RBP24.04■■□□□ 1.44
HOMER3-201ENST00000221222 CCNCP24863 283 aa24.04■■□□□ 1.44
HOMER3-201ENST00000221222 ZNF33AQ06730 810 aa24.04■■□□□ 1.44
HOMER3-201ENST00000221222 PDK1Q15118 436 aa24.04■■□□□ 1.44
HOMER3-201ENST00000221222 SEL1L2Q5TEA6 688 aa24.04■■□□□ 1.44
HOMER3-201ENST00000221222 PCDH20Q8N6Y1 951 aaKnown RBP24.04■■□□□ 1.44
HOMER3-201ENST00000221222 TSTD1Q8NFU3 115 aa24.04■■□□□ 1.44
HOMER3-201ENST00000221222 P3H4Q92791 437 aa24.04■■□□□ 1.44
HOMER3-201ENST00000221222 BRD8Q9H0E9 1235 aa24.04■■□□□ 1.44
HOMER3-201ENST00000221222 ZKSCAN5Q9Y2L8 839 aa24.04■■□□□ 1.44
HOMER3-201ENST00000221222 FCF1Q9Y324 198 aaKnown RBP24.04■■□□□ 1.44
HOMER3-201ENST00000221222 TCRBV21S2A2A0A5A6 115 aa24.03■■□□□ 1.44
HOMER3-201ENST00000221222 APBB3O95704 486 aa24.03■■□□□ 1.44
HOMER3-201ENST00000221222 VAV1P15498 845 aa24.03■■□□□ 1.44
HOMER3-201ENST00000221222 GNG11P61952 73 aa24.03■■□□□ 1.44
HOMER3-201ENST00000221222 PPIDQ08752 370 aaKnown RBP24.03■■□□□ 1.44
HOMER3-201ENST00000221222 KLF1Q13351 362 aaPredicted RBP24.03■■□□□ 1.44
HOMER3-201ENST00000221222 TMCO4Q5TGY1 634 aa24.03■■□□□ 1.44
HOMER3-201ENST00000221222 TIGD7Q6NT04 549 aaPredicted RBP24.03■■□□□ 1.44
HOMER3-201ENST00000221222 Q6ZVU0 165 aa24.03■■□□□ 1.44
HOMER3-201ENST00000221222 PLPP6Q8IY26 295 aa24.03■■□□□ 1.44
HOMER3-201ENST00000221222 HHIPQ96QV1 700 aa24.03■■□□□ 1.44
HOMER3-201ENST00000221222 EIF2AK3Q9NZJ5 1116 aaKnown RBP24.03■■□□□ 1.44
HOMER3-201ENST00000221222 SAE1Q9UBE0 346 aaPredicted RBP24.03■■□□□ 1.44
HOMER3-201ENST00000221222 PPP1R12AO14974 1030 aaPredicted RBP24.03■■□□□ 1.44
HOMER3-201ENST00000221222 ALDH1A2O94788 518 aa24.03■■□□□ 1.44
HOMER3-201ENST00000221222 ATP1A1P05023 1023 aaKnown RBP24.03■■□□□ 1.44
HOMER3-201ENST00000221222 COPAP53621 1224 aa24.03■■□□□ 1.44
HOMER3-201ENST00000221222 ELAVL3Q14576 367 aaKnown RBP24.03■■□□□ 1.44
HOMER3-201ENST00000221222 CYTH1Q15438 398 aa24.03■■□□□ 1.44
HOMER3-201ENST00000221222 RASSF3Q86WH2 238 aa24.03■■□□□ 1.44
HOMER3-201ENST00000221222 OR2A12Q8NGT7 310 aa24.03■■□□□ 1.44
HOMER3-201ENST00000221222 OR2T3Q8NH03 318 aa24.03■■□□□ 1.44
HOMER3-201ENST00000221222 CCDC114Q96M63 670 aa24.03■■□□□ 1.44
HOMER3-201ENST00000221222 FANCMQ8IYD8 2048 aa24.02■■□□□ 1.44
HOMER3-201ENST00000221222 MATN3O15232 486 aa24.02■■□□□ 1.44
HOMER3-201ENST00000221222 GABRG2P18507 467 aa24.02■■□□□ 1.44
HOMER3-201ENST00000221222 HNRNPDQ14103 355 aaKnown RBP24.02■■□□□ 1.44
HOMER3-201ENST00000221222 LBRQ14739 615 aaKnown RBP24.02■■□□□ 1.44
HOMER3-201ENST00000221222 NOMO1Q15155 1222 aa24.02■■□□□ 1.44
HOMER3-201ENST00000221222 CCDC181Q5TID7 509 aa24.02■■□□□ 1.44
HOMER3-201ENST00000221222 CCDC13Q8IYE1 715 aa24.02■■□□□ 1.44
HOMER3-201ENST00000221222 CCNYQ8ND76 341 aa24.02■■□□□ 1.44
HOMER3-201ENST00000221222 MAML1Q92585 1016 aa24.02■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms