RNA–Protein interactions for RNA: ENST00000040584.5

HOXC8-201, Transcript of homeobox C8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC8, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8-201ENST00000040584 FAM78AQ5JUQ0 283 aa22.45■■□□□ 1.19
HOXC8-201ENST00000040584 ATAT1Q5SQI0 421 aa22.45■■□□□ 1.19
HOXC8-201ENST00000040584 SWT1Q5T5J6 900 aaKnown RBP22.45■■□□□ 1.19
HOXC8-201ENST00000040584 RNASEH2BQ5TBB1 312 aaKnown RBP22.45■■□□□ 1.19
HOXC8-201ENST00000040584 TTC39BQ5VTQ0 682 aaPredicted RBP22.45■■□□□ 1.19
HOXC8-201ENST00000040584 CHST9Q7L1S5 443 aa22.45■■□□□ 1.19
HOXC8-201ENST00000040584 GBP7Q8N8V2 638 aaPredicted RBP22.45■■□□□ 1.19
HOXC8-201ENST00000040584 HJURPQ8NCD3 748 aaPredicted RBP22.45■■□□□ 1.19
HOXC8-201ENST00000040584 LRRC3BQ96PB8 259 aa22.45■■□□□ 1.19
HOXC8-201ENST00000040584 TSGA13Q96PP4 275 aa22.45■■□□□ 1.19
HOXC8-201ENST00000040584 FERMT1Q9BQL6 677 aa22.45■■□□□ 1.19
HOXC8-201ENST00000040584 PHACTR1Q9C0D0 580 aa22.45■■□□□ 1.19
HOXC8-201ENST00000040584 KLC4Q9NSK0 619 aa22.45■■□□□ 1.19
HOXC8-201ENST00000040584 NKIRAS1Q9NYS0 192 aa22.45■■□□□ 1.19
HOXC8-201ENST00000040584 FARP1Q9Y4F1 1045 aaPredicted RBP22.45■■□□□ 1.19
HOXC8-201ENST00000040584 NYNRINQ9P2P1 1898 aaKnown RBP22.45■■□□□ 1.18
HOXC8-201ENST00000040584 A0A0D9SEW6 157 aa22.45■■□□□ 1.18
HOXC8-201ENST00000040584 ARHGAP42A6NI28 874 aa22.45■■□□□ 1.18
HOXC8-201ENST00000040584 POU3F3P20264 500 aaPredicted RBP22.45■■□□□ 1.18
HOXC8-201ENST00000040584 ACVRL1P37023 503 aa22.45■■□□□ 1.18
HOXC8-201ENST00000040584 VIPR2P41587 438 aa22.45■■□□□ 1.18
HOXC8-201ENST00000040584 CES5AQ6NT32 575 aa22.45■■□□□ 1.18
HOXC8-201ENST00000040584 TDRPQ86YL5 185 aa22.45■■□□□ 1.18
HOXC8-201ENST00000040584 CELF5Q8N6W0 485 aaKnown RBP22.45■■□□□ 1.18
HOXC8-201ENST00000040584 DDI1Q8WTU0 396 aa22.45■■□□□ 1.18
HOXC8-201ENST00000040584 CKAP2Q8WWK9 683 aa22.45■■□□□ 1.18
HOXC8-201ENST00000040584 GRAMD1AQ96CP6 724 aa22.45■■□□□ 1.18
HOXC8-201ENST00000040584 RSPRY1Q96DX4 576 aa22.45■■□□□ 1.18
HOXC8-201ENST00000040584 RBM15Q96T37 977 aaKnown RBP eCLIP22.45■■□□□ 1.18
HOXC8-201ENST00000040584 ELAC2Q9BQ52 826 aaKnown RBP22.45■■□□□ 1.18
HOXC8-201ENST00000040584 LINC00597Q9H2U6 94 aa22.45■■□□□ 1.18
HOXC8-201ENST00000040584 IPO11Q9UI26 975 aaKnown RBP22.45■■□□□ 1.18
HOXC8-201ENST00000040584 SHROOM3Q8TF72 1996 aa22.45■■□□□ 1.18
HOXC8-201ENST00000040584 A0A0A0MRY4 1105 aa22.44■■□□□ 1.18
HOXC8-201ENST00000040584 TYW5A2RUC4 315 aaKnown RBP22.44■■□□□ 1.18
HOXC8-201ENST00000040584 BRAFP15056 766 aa22.44■■□□□ 1.18
HOXC8-201ENST00000040584 CCNCP24863 283 aa22.44■■□□□ 1.18
HOXC8-201ENST00000040584 PTPN3P26045 913 aa22.44■■□□□ 1.18
HOXC8-201ENST00000040584 LTBRP36941 435 aa22.44■■□□□ 1.18
HOXC8-201ENST00000040584 SLC18A1P54219 525 aa22.44■■□□□ 1.18
HOXC8-201ENST00000040584 PPARDQ03181 441 aa22.44■■□□□ 1.18
HOXC8-201ENST00000040584 PARP15Q460N3 678 aa22.44■■□□□ 1.18
HOXC8-201ENST00000040584 ANKRD20A2Q5SQ80 823 aa22.44■■□□□ 1.18
HOXC8-201ENST00000040584 ANKRD20A1Q5TYW2 823 aa22.44■■□□□ 1.18
HOXC8-201ENST00000040584 ANKRD20A3Q5VUR7 823 aa22.44■■□□□ 1.18
HOXC8-201ENST00000040584 C4orf22Q6V702 233 aa22.44■■□□□ 1.18
HOXC8-201ENST00000040584 ZNF354CQ86Y25 554 aa22.44■■□□□ 1.18
HOXC8-201ENST00000040584 LRRC49Q8IUZ0 686 aa22.44■■□□□ 1.18
HOXC8-201ENST00000040584 CARNMT1Q8N4J0 409 aa22.44■■□□□ 1.18
HOXC8-201ENST00000040584 ST13P5Q8NFI4 369 aaPredicted RBP22.44■■□□□ 1.18
HOXC8-201ENST00000040584 CPT1BQ92523 772 aa22.44■■□□□ 1.18
HOXC8-201ENST00000040584 SGSM3Q96HU1 749 aa22.44■■□□□ 1.18
HOXC8-201ENST00000040584 SPATA13Q96N96 652 aa22.44■■□□□ 1.18
HOXC8-201ENST00000040584 KCNK9Q9NPC2 374 aa22.44■■□□□ 1.18
HOXC8-201ENST00000040584 PLK2Q9NYY3 685 aa22.44■■□□□ 1.18
HOXC8-201ENST00000040584 SENP1Q9P0U3 644 aa22.44■■□□□ 1.18
HOXC8-201ENST00000040584 MTSS1O43312 755 aa22.43■■□□□ 1.18
HOXC8-201ENST00000040584 SNX3O60493 162 aa22.43■■□□□ 1.18
HOXC8-201ENST00000040584 STK10O94804 968 aaKnown RBP22.43■■□□□ 1.18
HOXC8-201ENST00000040584 SUN1O94901 812 aa22.43■■□□□ 1.18
HOXC8-201ENST00000040584 TCF3P15923 654 aa22.43■■□□□ 1.18
HOXC8-201ENST00000040584 WEE1P30291 646 aa22.43■■□□□ 1.18
HOXC8-201ENST00000040584 YBEYP58557 167 aaPredicted RBP22.43■■□□□ 1.18
HOXC8-201ENST00000040584 GNA12Q03113 381 aa22.43■■□□□ 1.18
HOXC8-201ENST00000040584 ZBTB17Q13105 803 aa22.43■■□□□ 1.18
HOXC8-201ENST00000040584 RASA2Q15283 850 aa22.43■■□□□ 1.18
HOXC8-201ENST00000040584 CCDC38Q502W7 563 aa22.43■■□□□ 1.18
HOXC8-201ENST00000040584 ZNF567Q8N184 647 aa22.43■■□□□ 1.18
HOXC8-201ENST00000040584 ASB16Q96NS5 453 aa22.43■■□□□ 1.18
HOXC8-201ENST00000040584 SLC40A1Q9NP59 571 aa22.43■■□□□ 1.18
HOXC8-201ENST00000040584 SHOC2Q9UQ13 582 aa22.43■■□□□ 1.18
HOXC8-201ENST00000040584 TBC1D30Q9Y2I9 924 aa22.43■■□□□ 1.18
HOXC8-201ENST00000040584 USP15Q9Y4E8 981 aaPredicted RBP22.43■■□□□ 1.18
HOXC8-201ENST00000040584 WNT6Q9Y6F9 365 aa22.43■■□□□ 1.18
HOXC8-201ENST00000040584 H0Y626 953 aa22.43■■□□□ 1.18
HOXC8-201ENST00000040584 J3KR12 359 aa22.43■■□□□ 1.18
HOXC8-201ENST00000040584 SMAPO00193 183 aa22.43■■□□□ 1.18
HOXC8-201ENST00000040584 OPHN1O60890 802 aa22.43■■□□□ 1.18
HOXC8-201ENST00000040584 RHOCP08134 193 aa22.43■■□□□ 1.18
HOXC8-201ENST00000040584 MPPE1Q53F39 396 aa22.43■■□□□ 1.18
HOXC8-201ENST00000040584 FSCBQ5H9T9 825 aa22.43■■□□□ 1.18
HOXC8-201ENST00000040584 FAXCQ5TGI0 409 aa22.43■■□□□ 1.18
HOXC8-201ENST00000040584 CXorf57Q6NSI4 855 aaKnown RBP22.43■■□□□ 1.18
HOXC8-201ENST00000040584 TRPM8Q7Z2W7 1104 aa22.43■■□□□ 1.18
HOXC8-201ENST00000040584 PPIL6Q8IXY8 311 aa22.43■■□□□ 1.18
HOXC8-201ENST00000040584 OR7D4Q8NG98 312 aa22.43■■□□□ 1.18
HOXC8-201ENST00000040584 SMARCD2Q92925 531 aa22.43■■□□□ 1.18
HOXC8-201ENST00000040584 RAB6BQ9NRW1 208 aa22.43■■□□□ 1.18
HOXC8-201ENST00000040584 GDE1Q9NZC3 331 aa22.43■■□□□ 1.18
HOXC8-201ENST00000040584 SPTBN5Q9NRC6 3674 aaKnown RBP22.42■■□□□ 1.18
HOXC8-201ENST00000040584 LUC7L3O95232 432 aaKnown RBP22.42■■□□□ 1.18
HOXC8-201ENST00000040584 METTL18O95568 372 aa22.42■■□□□ 1.18
HOXC8-201ENST00000040584 JCHAINP01591 159 aa22.42■■□□□ 1.18
HOXC8-201ENST00000040584 IFNAR2P48551 515 aa22.42■■□□□ 1.18
HOXC8-201ENST00000040584 BASP1P80723 227 aaKnown RBP22.42■■□□□ 1.18
HOXC8-201ENST00000040584 SERINC3Q13530 473 aa22.42■■□□□ 1.18
HOXC8-201ENST00000040584 SETD3Q86TU7 594 aaPredicted RBP22.42■■□□□ 1.18
HOXC8-201ENST00000040584 NAT8LQ8N9F0 302 aa22.42■■□□□ 1.18
HOXC8-201ENST00000040584 USP33Q8TEY7 942 aa22.42■■□□□ 1.18
HOXC8-201ENST00000040584 PRCCQ92733 491 aaPredicted RBP22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms