RNA–Protein interactions for RNA: ENST00000011700.10

VPS13D-201, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 10,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-201ENST00000011700 ANAPC2Q9UJX6 822 aa6.16□□□□□ -1.42
VPS13D-201ENST00000011700 GNB5O14775 395 aa6.15□□□□□ -1.42
VPS13D-201ENST00000011700 AIREO43918 545 aa6.15□□□□□ -1.42
VPS13D-201ENST00000011700 ASGR1P07306 291 aa6.15□□□□□ -1.42
VPS13D-201ENST00000011700 MYL3P08590 195 aa6.15□□□□□ -1.42
VPS13D-201ENST00000011700 THRBP10828 461 aa6.15□□□□□ -1.42
VPS13D-201ENST00000011700 EPHB2P29323 1055 aa6.15□□□□□ -1.42
VPS13D-201ENST00000011700 AQP5P55064 265 aa6.15□□□□□ -1.42
VPS13D-201ENST00000011700 PPARDQ03181 441 aa6.15□□□□□ -1.42
VPS13D-201ENST00000011700 GRIK3Q13003 919 aa6.15□□□□□ -1.42
VPS13D-201ENST00000011700 SPIDRQ14159 915 aa6.15□□□□□ -1.42
VPS13D-201ENST00000011700 STARD3Q14849 445 aa6.15□□□□□ -1.42
VPS13D-201ENST00000011700 SWT1Q5T5J6 900 aaKnown RBP6.15□□□□□ -1.42
VPS13D-201ENST00000011700 MARC1Q5VT66 337 aa6.15□□□□□ -1.42
VPS13D-201ENST00000011700 IZUMO2Q6UXV1 221 aa6.15□□□□□ -1.42
VPS13D-201ENST00000011700 DCAKDQ8WVC6 231 aa6.15□□□□□ -1.42
VPS13D-201ENST00000011700 AGAP1Q9UPQ3 857 aa6.15□□□□□ -1.42
VPS13D-201ENST00000011700 CACNA1IQ9P0X4 2223 aa6.15□□□□□ -1.42
VPS13D-201ENST00000011700 OR6A2O95222 327 aa6.15□□□□□ -1.42
VPS13D-201ENST00000011700 PECAM1P16284 738 aaPredicted RBP6.15□□□□□ -1.42
VPS13D-201ENST00000011700 COMTP21964 271 aa6.15□□□□□ -1.42
VPS13D-201ENST00000011700 DNAJB1P25685 340 aa6.15□□□□□ -1.42
VPS13D-201ENST00000011700 EPHB3P54753 998 aa6.15□□□□□ -1.42
VPS13D-201ENST00000011700 ITGB3BPQ13352 177 aaPredicted RBP6.15□□□□□ -1.42
VPS13D-201ENST00000011700 FASTKQ14296 549 aaKnown RBP6.15□□□□□ -1.42
VPS13D-201ENST00000011700 ZBTB6Q15916 424 aa6.15□□□□□ -1.42
VPS13D-201ENST00000011700 CRY1Q16526 586 aa6.15□□□□□ -1.42
VPS13D-201ENST00000011700 HKDC1Q2TB90 917 aa6.15□□□□□ -1.42
VPS13D-201ENST00000011700 ERFEQ4G0M1 354 aa6.15□□□□□ -1.42
VPS13D-201ENST00000011700 KCTD21Q4G0X4 260 aa6.15□□□□□ -1.42
VPS13D-201ENST00000011700 COBLL1Q53SF7 1204 aa6.15□□□□□ -1.42
VPS13D-201ENST00000011700 CSGALNACT1Q8TDX6 532 aa6.15□□□□□ -1.42
VPS13D-201ENST00000011700 PPP1R16BQ96T49 567 aa6.15□□□□□ -1.42
VPS13D-201ENST00000011700 PCDH18Q9HCL0 1135 aa6.15□□□□□ -1.42
VPS13D-201ENST00000011700 KBTBD4Q9NVX7 518 aa6.15□□□□□ -1.42
VPS13D-201ENST00000011700 F5P12259 2224 aa6.15□□□□□ -1.42
VPS13D-201ENST00000011700 PIK3C2BO00750 1634 aa6.15□□□□□ -1.42
VPS13D-201ENST00000011700 SPTA1P02549 2419 aa6.15□□□□□ -1.42
VPS13D-201ENST00000011700 KMOO15229 486 aa6.15□□□□□ -1.42
VPS13D-201ENST00000011700 RAD51CO43502 376 aa6.15□□□□□ -1.42
VPS13D-201ENST00000011700 SCGB2A1O75556 95 aa6.15□□□□□ -1.42
VPS13D-201ENST00000011700 OR6B1O95007 311 aa6.15□□□□□ -1.42
VPS13D-201ENST00000011700 AGR2O95994 175 aa6.15□□□□□ -1.42
VPS13D-201ENST00000011700 DEFB107AQ8IZN7 70 aa6.15□□□□□ -1.42
VPS13D-201ENST00000011700 INO80EQ8NBZ0 244 aaPredicted RBP6.15□□□□□ -1.42
VPS13D-201ENST00000011700 FLCNQ8NFG4 579 aa6.15□□□□□ -1.42
VPS13D-201ENST00000011700 REXO5Q96IC2 774 aaKnown RBP6.15□□□□□ -1.42
VPS13D-201ENST00000011700 WRNIP1Q96S55 665 aa6.15□□□□□ -1.42
VPS13D-201ENST00000011700 REEP2Q9BRK0 252 aa6.15□□□□□ -1.42
VPS13D-201ENST00000011700 TAS2R7Q9NYW3 318 aa6.15□□□□□ -1.42
VPS13D-201ENST00000011700 ZNF609O15014 1411 aa6.15□□□□□ -1.42
VPS13D-201ENST00000011700 ROBO3Q96MS0 1386 aa6.15□□□□□ -1.42
VPS13D-201ENST00000011700 C1orf232A0A0U1RR37 186 aa6.15□□□□□ -1.42
VPS13D-201ENST00000011700 SLC25A12O75746 678 aa6.15□□□□□ -1.42
VPS13D-201ENST00000011700 IPO13O94829 963 aaKnown RBP6.15□□□□□ -1.42
VPS13D-201ENST00000011700 APOL3O95236 402 aa6.15□□□□□ -1.42
VPS13D-201ENST00000011700 ASMTLO95671 621 aa6.15□□□□□ -1.42
VPS13D-201ENST00000011700 ZNF682O95780 498 aa6.15□□□□□ -1.42
VPS13D-201ENST00000011700 CYB5AP00167 134 aa6.15□□□□□ -1.42
VPS13D-201ENST00000011700 HOXA13P31271 388 aaPredicted RBP6.15□□□□□ -1.42
VPS13D-201ENST00000011700 OSTNP61366 133 aa6.15□□□□□ -1.42
VPS13D-201ENST00000011700 FAM98CQ17RN3 349 aaKnown RBP6.15□□□□□ -1.42
VPS13D-201ENST00000011700 DGKKQ5KSL6 1271 aa6.15□□□□□ -1.42
VPS13D-201ENST00000011700 METTL16Q86W50 562 aaKnown RBP6.15□□□□□ -1.42
VPS13D-201ENST00000011700 GLB1L3Q8NCI6 653 aaPredicted RBP6.15□□□□□ -1.42
VPS13D-201ENST00000011700 RAET1EQ8TD07 263 aa6.15□□□□□ -1.42
VPS13D-201ENST00000011700 MKL1Q969V6 931 aa6.15□□□□□ -1.42
VPS13D-201ENST00000011700 PHB2Q99623 299 aa6.15□□□□□ -1.42
VPS13D-201ENST00000011700 AIFM2Q9BRQ8 373 aa6.15□□□□□ -1.42
VPS13D-201ENST00000011700 HTATIP2Q9BUP3 242 aa6.15□□□□□ -1.42
VPS13D-201ENST00000011700 DPY30Q9C005 99 aa6.15□□□□□ -1.42
VPS13D-201ENST00000011700 ZNF624Q9P2J8 865 aaPredicted RBP6.15□□□□□ -1.42
VPS13D-201ENST00000011700 DAPK2Q9UIK4 370 aa6.15□□□□□ -1.42
VPS13D-201ENST00000011700 BCS1LQ9Y276 419 aa6.15□□□□□ -1.42
VPS13D-201ENST00000011700 RPS6KA4O75676 772 aa6.15□□□□□ -1.42
VPS13D-201ENST00000011700 ICAM1P05362 532 aa6.15□□□□□ -1.42
VPS13D-201ENST00000011700 ETS1P14921 441 aa6.15□□□□□ -1.42
VPS13D-201ENST00000011700 CTPS1P17812 591 aa6.15□□□□□ -1.42
VPS13D-201ENST00000011700 SYTL1Q8IYJ3 562 aa6.15□□□□□ -1.42
VPS13D-201ENST00000011700 FNDC5Q8NAU1 212 aa6.15□□□□□ -1.42
VPS13D-201ENST00000011700 USP7Q93009 1102 aa6.15□□□□□ -1.42
VPS13D-201ENST00000011700 RHBDF1Q96CC6 855 aa6.15□□□□□ -1.42
VPS13D-201ENST00000011700 UROC1Q96N76 676 aa6.15□□□□□ -1.42
VPS13D-201ENST00000011700 PAFAH2Q99487 392 aa6.15□□□□□ -1.42
VPS13D-201ENST00000011700 FTHL17Q9BXU8 183 aa6.15□□□□□ -1.42
VPS13D-201ENST00000011700 OPTCQ9UBM4 332 aa6.15□□□□□ -1.42
VPS13D-201ENST00000011700 AASSQ9UDR5 926 aa6.15□□□□□ -1.42
VPS13D-201ENST00000011700 CYP26A1O43174 497 aa6.15□□□□□ -1.43
VPS13D-201ENST00000011700 ASS1P00966 412 aaKnown RBP6.15□□□□□ -1.43
VPS13D-201ENST00000011700 FTH1P02794 183 aa6.15□□□□□ -1.43
VPS13D-201ENST00000011700 CHRNGP07510 517 aa6.15□□□□□ -1.43
VPS13D-201ENST00000011700 PRDX6P30041 224 aa6.15□□□□□ -1.43
VPS13D-201ENST00000011700 RHAGQ02094 409 aa6.15□□□□□ -1.43
VPS13D-201ENST00000011700 STK4Q13043 487 aa6.15□□□□□ -1.43
VPS13D-201ENST00000011700 RRP1BQ14684 758 aaKnown RBP6.15□□□□□ -1.43
VPS13D-201ENST00000011700 SKIV2LQ15477 1246 aaKnown RBP6.15□□□□□ -1.43
VPS13D-201ENST00000011700 Q3C1V9 767 aa6.15□□□□□ -1.43
VPS13D-201ENST00000011700 DDI2Q5TDH0 399 aa6.15□□□□□ -1.43
VPS13D-201ENST00000011700 FKBP1CQ5VVH2 108 aa6.15□□□□□ -1.43
VPS13D-201ENST00000011700 MARK2Q7KZI7 788 aaKnown RBP6.15□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms