RNA–Protein interactions for RNA: ENSMUST00000110301.1

Clcn3-204, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,099 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-204ENSMUST00000110301 Zfp655Q9CZP3 541 aaKnown RBP13.58□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Ephx1Q9D379 455 aa13.58□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Dpysl5Q9EQF6 564 aa13.58□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Vmn2r25W4VSP2 855 aa13.58□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Pik3r2O08908 722 aa13.57□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Wnt6P22727 364 aa13.57□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Grb7Q03160 535 aa13.57□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Zfp956Q3UZY6 572 aa13.57□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Znf185Q62394 352 aa13.57□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Wee2Q66JT0 555 aa13.57□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Zswim5Q80TC6 1188 aa13.57□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Abcf3Q8K268 709 aa13.57□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Haus3Q8QZX2 570 aa13.57□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Brd8Q8R3B7 951 aa13.57□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Coro7Q9D2V7 922 aa13.57□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Ccdc86Q9JJ89 426 aa13.57□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Spag6Q9JLI7 507 aa13.57□□□□□ -0.24
Clcn3-204ENSMUST00000110301 H2afb2S4R1M3 115 aa13.57□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Gm42688A0A0R3P9D1 673 aa13.57□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Gbp4A4UUI3 631 aa13.57□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Kpna7C0LLJ0 499 aa13.57□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Vmn2r5K7N788 911 aa13.57□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Cxcr3O88410 367 aa13.57□□□□□ -0.24
Clcn3-204ENSMUST00000110301 P01650 108 aa13.57□□□□□ -0.24
Clcn3-204ENSMUST00000110301 P01653 108 aa13.57□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Serpind1P49182 478 aa13.57□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Rps24P62849 133 aaKnown RBP13.57□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Gabrb2P63137 512 aa13.57□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Adamts1P97857 968 aa13.57□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Ccdc138Q0VF22 680 aa13.57□□□□□ -0.24
Clcn3-204ENSMUST00000110301 ADGRF3Q58Y75 991 aa13.57□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Mtmr12Q80TA6 747 aa13.57□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Xylt1Q811B1 953 aa13.57□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Znf879Q8BI99 563 aa13.57□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Ccdc142Q8CAI1 738 aa13.57□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Tdrd7Q8K1H1 1086 aaKnown RBP13.57□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Mkl1Q8K4J6 964 aa13.57□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Commd8Q9CZG3 183 aa13.57□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Spata9Q9D9R3 252 aa13.57□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Akr1a1Q9JII6 325 aa13.57□□□□□ -0.24
Clcn3-204ENSMUST00000110301 CitP49025 2055 aa13.57□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Ttll9A2APC3 461 aa13.57□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Gm43302L7N1X8 611 aa13.57□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Enpp1P06802 906 aa13.57□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Akr1b7P21300 316 aa13.57□□□□□ -0.24
Clcn3-204ENSMUST00000110301 ItgavP43406 1044 aa13.57□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Ephb3P54754 993 aaKnown RBP13.57□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Ldb1P70662 411 aa13.57□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Gbp10Q000W5 611 aa13.57□□□□□ -0.24
Clcn3-204ENSMUST00000110301 1700061G19RikQ08EE8 705 aa13.57□□□□□ -0.24
Clcn3-204ENSMUST00000110301 KrtdapQ3V2T4 102 aa13.57□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Noc4lQ8BHY2 516 aa13.57□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Slc41a1Q8BJA2 512 aa13.57□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Gsto2Q8K2Q2 248 aa13.57□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Slf1Q8R3P9 1054 aa13.57□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Tspan33Q8R3S2 283 aa13.57□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Zfp617Q91WM0 559 aa13.57□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Dnajc3Q91YW3 504 aa13.57□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Olfr706Q9EPF8 316 aa13.57□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Mpp5Q9JLB2 675 aa13.57□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Lactbl1S4R213 581 aa13.57□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Catsperg2C6KI89 1145 aa13.56□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Itm2bO89051 266 aa13.56□□□□□ -0.24
Clcn3-204ENSMUST00000110301 SpnP15702 395 aa13.56□□□□□ -0.24
Clcn3-204ENSMUST00000110301 AxlQ00993 888 aa13.56□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Ceacam5Q3UKK2 947 aa13.56□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Akap14Q3V0I7 536 aa13.56□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Slc5a10Q5SWY8 596 aa13.56□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Olfr1198Q7TR12 308 aa13.56□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Tex9Q9D845 387 aa13.56□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Rpl9-ps6A0A140T8T4 192 aa13.56□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Kifc5bE9PUA5 672 aa13.56□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Gm6408J3QNG1 320 aa13.56□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Rpl9P51410 192 aaKnown RBP13.56□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Ctps1P70698 591 aa13.56□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Pecam1Q08481 727 aaKnown RBP13.56□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Stard3Q61542 446 aa13.56□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Gxylt2Q810K9 444 aa13.56□□□□□ -0.24
Clcn3-204ENSMUST00000110301 ChfrQ810L3 664 aa13.56□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Morc4Q8BMD7 928 aa13.56□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Samd3Q8C4H2 520 aa13.56□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Themis3Q9CU24 569 aa13.56□□□□□ -0.24
Clcn3-204ENSMUST00000110301 NckipsdQ9ESJ4 714 aa13.56□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Morf4l2Q9R0Q4 288 aa13.56□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Ly75Q60767 1723 aa13.56□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Armt1A6H630 439 aa13.56□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Krt90E9Q1Z0 538 aa13.56□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Zfr2E9Q5M4 874 aa13.56□□□□□ -0.24
Clcn3-204ENSMUST00000110301 BC024978J3QPC3 361 aa13.56□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Vmn2r70K7N702 854 aa13.56□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Hs3st1O35310 311 aa13.56□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Ppp3ccP48455 513 aa13.56□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Pih1d3Q3KNI6 218 aa13.56□□□□□ -0.24
Clcn3-204ENSMUST00000110301 GmncQ3URY2 333 aa13.56□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Khdrbs1Q60749 443 aaKnown RBP13.56□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Olfr538Q7TRT5 310 aa13.56□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Dnajb13Q80Y75 316 aa13.56□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Stkld1Q80YS9 662 aa13.56□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Nkiras1Q8CEC5 192 aa13.56□□□□□ -0.24
Clcn3-204ENSMUST00000110301 Evi2bQ8VD58 444 aa13.56□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 35.5 ms