RNA–Protein interactions for RNA: ENSMUST00000030586.14

Ccdc28b-201, Transcript of Coiled-coil domain-containing protein 28B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28b, Length 879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28b-201ENSMUST00000030586 Ism2D3Z6A3 493 aa11.59□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Dpysl2O08553 572 aaKnown RBP11.59□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Per2O54943 1257 aa11.59□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 FurinP23188 793 aa11.59□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 GhrhrP32082 423 aa11.59□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Pola2P33611 600 aa11.59□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 PorP37040 678 aa11.59□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 ItgavP43406 1044 aa11.59□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Cdo1P60334 200 aa11.59□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Arl4aP61213 200 aa11.59□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Bpifa1P97361 278 aa11.59□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Zfyve27Q3TXX3 415 aa11.59□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 B3gntl1Q3U129 357 aa11.59□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Ccdc42Q5SV66 316 aa11.59□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Pde1aQ61481 565 aa11.59□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 EsrrbQ61539 433 aa11.59□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Nudcd1Q6PIP5 582 aa11.59□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 SrlQ7TQ48 910 aa11.59□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Olfr765Q7TRI6 309 aa11.59□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Mettl20Q80ZM3 255 aa11.59□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Rhot1Q8BG51 631 aa11.59□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Pknox2Q8BG99 474 aa11.59□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Kbtbd3Q8BHI4 607 aa11.59□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Tmem74Q8BQU7 305 aa11.59□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Tmem72Q8C3K5 275 aa11.59□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Ly6g6eQ8K1T6 166 aa11.59□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Apbb3Q8R1C9 486 aa11.59□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Hid1Q8R1F6 788 aa11.59□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Fbxw7Q8VBV4 629 aa11.59□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Olfr767Q8VG33 309 aa11.59□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Olfr45Q8VGM1 311 aa11.59□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Usp11Q99K46 921 aa11.59□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 MtapQ9CQ65 283 aa11.59□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Dph5Q9CWQ0 281 aa11.59□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Plscr3Q9JIZ9 296 aa11.59□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Caln1Q9JJG7 219 aa11.59□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Znf536Q8K083 1302 aa11.59□□□□□ -0.55
Ccdc28b-201ENSMUST00000030586 Olfr316A0A0N4SVP2 306 aa11.58□□□□□ -0.56
Ccdc28b-201ENSMUST00000030586 Nlrp1bA1Z198 1177 aa11.58□□□□□ -0.56
Ccdc28b-201ENSMUST00000030586 Gm13101A2ASJ0 481 aa11.58□□□□□ -0.56
Ccdc28b-201ENSMUST00000030586 Kcng1A2BDX4 514 aa11.58□□□□□ -0.56
Ccdc28b-201ENSMUST00000030586 CatsperbA2RTF1 1109 aa11.58□□□□□ -0.56
Ccdc28b-201ENSMUST00000030586 LipiF6YQT7 476 aa11.58□□□□□ -0.56
Ccdc28b-201ENSMUST00000030586 Pex5O09012 639 aa11.58□□□□□ -0.56
Ccdc28b-201ENSMUST00000030586 Wsb2O54929 404 aa11.58□□□□□ -0.56
Ccdc28b-201ENSMUST00000030586 Adcy1O88444 1118 aa11.58□□□□□ -0.56
Ccdc28b-201ENSMUST00000030586 ShdO88834 343 aa11.58□□□□□ -0.56
Ccdc28b-201ENSMUST00000030586 Pdia4P08003 638 aaKnown RBP11.58□□□□□ -0.56
Ccdc28b-201ENSMUST00000030586 LcatP16301 438 aa11.58□□□□□ -0.56
Ccdc28b-201ENSMUST00000030586 Pth1rP41593 591 aa11.58□□□□□ -0.56
Ccdc28b-201ENSMUST00000030586 Il12bP43432 335 aa11.58□□□□□ -0.56
Ccdc28b-201ENSMUST00000030586 HccsP53702 272 aa11.58□□□□□ -0.56
Ccdc28b-201ENSMUST00000030586 Fgf14P70379 247 aa11.58□□□□□ -0.56
Ccdc28b-201ENSMUST00000030586 Atp8a1P70704 1164 aa11.58□□□□□ -0.56
Ccdc28b-201ENSMUST00000030586 Agbl1Q09M05 972 aa11.58□□□□□ -0.56
Ccdc28b-201ENSMUST00000030586 IqcmQ149I8 489 aa11.58□□□□□ -0.56
Ccdc28b-201ENSMUST00000030586 Fbxw18Q3TSA9 469 aa11.58□□□□□ -0.56
Ccdc28b-201ENSMUST00000030586 Olfr318Q5NCD7 306 aa11.58□□□□□ -0.56
Ccdc28b-201ENSMUST00000030586 Gm11492Q5ND19 536 aa11.58□□□□□ -0.56
Ccdc28b-201ENSMUST00000030586 Sim2Q61079 657 aa11.58□□□□□ -0.56
Ccdc28b-201ENSMUST00000030586 MafkQ61827 156 aa11.58□□□□□ -0.56
Ccdc28b-201ENSMUST00000030586 Atg16l2Q6KAU8 623 aa11.58□□□□□ -0.56
Ccdc28b-201ENSMUST00000030586 SpopQ6ZWS8 374 aa11.58□□□□□ -0.56
Ccdc28b-201ENSMUST00000030586 Snd1Q78PY7 910 aaKnown RBP11.58□□□□□ -0.56
Ccdc28b-201ENSMUST00000030586 Stx16Q8BVI5 326 aa11.58□□□□□ -0.56
Ccdc28b-201ENSMUST00000030586 Epn2Q8CHU3 595 aa11.58□□□□□ -0.56
Ccdc28b-201ENSMUST00000030586 Pnma3Q8JZW8 466 aa11.58□□□□□ -0.56
Ccdc28b-201ENSMUST00000030586 Mtss1Q8R1S4 759 aa11.58□□□□□ -0.56
Ccdc28b-201ENSMUST00000030586 Slc39a3Q99K24 317 aa11.58□□□□□ -0.56
Ccdc28b-201ENSMUST00000030586 Thg1lQ9CY52 298 aa11.58□□□□□ -0.56
Ccdc28b-201ENSMUST00000030586 Spata17Q9D552 379 aa11.58□□□□□ -0.56
Ccdc28b-201ENSMUST00000030586 Adam21Q9JI76 729 aa11.58□□□□□ -0.56
Ccdc28b-201ENSMUST00000030586 CalcrlQ9R1W5 463 aa11.58□□□□□ -0.56
Ccdc28b-201ENSMUST00000030586 CpqQ9WVJ3 470 aa11.58□□□□□ -0.56
Ccdc28b-201ENSMUST00000030586 IqccA2ADZ8 418 aa11.57□□□□□ -0.56
Ccdc28b-201ENSMUST00000030586 Vmn2r94E9PZK8 818 aa11.57□□□□□ -0.56
Ccdc28b-201ENSMUST00000030586 Gm20403G3UYB0 123 aa11.57□□□□□ -0.56
Ccdc28b-201ENSMUST00000030586 Il13ra1O09030 424 aa11.57□□□□□ -0.56
Ccdc28b-201ENSMUST00000030586 Gp1baO35930 734 aa11.57□□□□□ -0.56
Ccdc28b-201ENSMUST00000030586 Cyp2b19O55071 492 aa11.57□□□□□ -0.56
Ccdc28b-201ENSMUST00000030586 Per3O70361 1113 aa11.57□□□□□ -0.56
Ccdc28b-201ENSMUST00000030586 Serpina3cP29621 417 aa11.57□□□□□ -0.56
Ccdc28b-201ENSMUST00000030586 Smpdl3bP58242 456 aa11.57□□□□□ -0.56
Ccdc28b-201ENSMUST00000030586 Emilin3P59900 758 aa11.57□□□□□ -0.56
Ccdc28b-201ENSMUST00000030586 ErgP81270 486 aa11.57□□□□□ -0.56
Ccdc28b-201ENSMUST00000030586 AcrbpQ3V140 540 aa11.57□□□□□ -0.56
Ccdc28b-201ENSMUST00000030586 Defb28Q3V2L0 89 aa11.57□□□□□ -0.56
Ccdc28b-201ENSMUST00000030586 Elavl3Q60900 367 aaKnown RBP11.57□□□□□ -0.56
Ccdc28b-201ENSMUST00000030586 Paxip1Q6NZQ4 1056 aa11.57□□□□□ -0.56
Ccdc28b-201ENSMUST00000030586 Fnip2Q80TD3 1108 aa11.57□□□□□ -0.56
Ccdc28b-201ENSMUST00000030586 Zbtb41Q811F1 908 aa11.57□□□□□ -0.56
Ccdc28b-201ENSMUST00000030586 Fam72aQ8BFZ8 149 aa11.57□□□□□ -0.56
Ccdc28b-201ENSMUST00000030586 4933402J07RikQ8BHX0 270 aa11.57□□□□□ -0.56
Ccdc28b-201ENSMUST00000030586 Nop53Q8BK35 484 aaKnown RBP11.57□□□□□ -0.56
Ccdc28b-201ENSMUST00000030586 MdficQ8BX65 247 aa11.57□□□□□ -0.56
Ccdc28b-201ENSMUST00000030586 Gsto2Q8K2Q2 248 aa11.57□□□□□ -0.56
Ccdc28b-201ENSMUST00000030586 Ipo11Q8K2V6 975 aa11.57□□□□□ -0.56
Ccdc28b-201ENSMUST00000030586 PhykplQ8R1K4 467 aa11.57□□□□□ -0.56
Ccdc28b-201ENSMUST00000030586 NtpcrQ9CQA9 190 aaKnown RBP11.57□□□□□ -0.56
Ccdc28b-201ENSMUST00000030586 Luc7lQ9CYI4 371 aaKnown RBP11.57□□□□□ -0.56
Retrieved 100 of 22,080 RNA–protein pairs in 26.5 ms