RNA–Protein interactions for RNA: ENST00000641927.1

PHGDH-230, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,678 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-230ENST00000641927 RETSATQ6NUM9 610 aa17.82■□□□□ 0.44
PHGDH-230ENST00000641927 ADIPOR2Q86V24 386 aa17.82■□□□□ 0.44
PHGDH-230ENST00000641927 JAMLQ86YT9 394 aa17.82■□□□□ 0.44
PHGDH-230ENST00000641927 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.82■□□□□ 0.44
PHGDH-230ENST00000641927 CCDC110Q8TBZ0 833 aa17.82■□□□□ 0.44
PHGDH-230ENST00000641927 ATXN2LQ8WWM7 1075 aaKnown RBP17.82■□□□□ 0.44
PHGDH-230ENST00000641927 DNASE1L2Q92874 299 aa17.82■□□□□ 0.44
PHGDH-230ENST00000641927 SLCO2A1Q92959 643 aa17.82■□□□□ 0.44
PHGDH-230ENST00000641927 CHFRQ96EP1 664 aa17.82■□□□□ 0.44
PHGDH-230ENST00000641927 AGAP3Q96P47 875 aa17.82■□□□□ 0.44
PHGDH-230ENST00000641927 PNKPQ96T60 521 aa17.82■□□□□ 0.44
PHGDH-230ENST00000641927 TRIM51Q9BSJ1 452 aa17.82■□□□□ 0.44
PHGDH-230ENST00000641927 PDFQ9HBH1 243 aa17.82■□□□□ 0.44
PHGDH-230ENST00000641927 SLC27A6Q9Y2P4 619 aa17.82■□□□□ 0.44
PHGDH-230ENST00000641927 PIAS3Q9Y6X2 628 aa17.82■□□□□ 0.44
PHGDH-230ENST00000641927 COL4A3Q01955 1670 aa17.82■□□□□ 0.44
PHGDH-230ENST00000641927 TBC1D3BA6NDS4 549 aa17.81■□□□□ 0.44
PHGDH-230ENST00000641927 ZSCAN5CA6NGD5 496 aaPredicted RBP17.81■□□□□ 0.44
PHGDH-230ENST00000641927 EFCAB8A8MWE9 144 aa17.81■□□□□ 0.44
PHGDH-230ENST00000641927 ZMPSTE24O75844 475 aa17.81■□□□□ 0.44
PHGDH-230ENST00000641927 RHOXF2BP0C7M4 288 aa17.81■□□□□ 0.44
PHGDH-230ENST00000641927 SRFP11831 508 aa17.81■□□□□ 0.44
PHGDH-230ENST00000641927 PTPN3P26045 913 aa17.81■□□□□ 0.44
PHGDH-230ENST00000641927 EIF2DP41214 584 aaKnown RBP17.81■□□□□ 0.44
PHGDH-230ENST00000641927 CTSOP43234 321 aaPredicted RBP17.81■□□□□ 0.44
PHGDH-230ENST00000641927 RENBPP51606 427 aa17.81■□□□□ 0.44
PHGDH-230ENST00000641927 SLC7A5Q01650 507 aa17.81■□□□□ 0.44
PHGDH-230ENST00000641927 SLC10A7Q0GE19 358 aa17.81■□□□□ 0.44
PHGDH-230ENST00000641927 MESP2Q0VG99 397 aa17.81■□□□□ 0.44
PHGDH-230ENST00000641927 WASHC5Q12768 1159 aa17.81■□□□□ 0.44
PHGDH-230ENST00000641927 ZBTB17Q13105 803 aa17.81■□□□□ 0.44
PHGDH-230ENST00000641927 LBRQ14739 615 aaKnown RBP17.81■□□□□ 0.44
PHGDH-230ENST00000641927 PREPLQ4J6C6 727 aaPredicted RBP17.81■□□□□ 0.44
PHGDH-230ENST00000641927 TMCO4Q5TGY1 634 aa17.81■□□□□ 0.44
PHGDH-230ENST00000641927 PID1Q7Z2X4 250 aa17.81■□□□□ 0.44
PHGDH-230ENST00000641927 TAB3Q8N5C8 712 aaPredicted RBP17.81■□□□□ 0.44
PHGDH-230ENST00000641927 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.81■□□□□ 0.44
PHGDH-230ENST00000641927 GLIS1Q8NBF1 620 aa17.81■□□□□ 0.44
PHGDH-230ENST00000641927 WFIKKN2Q8TEU8 576 aa17.81■□□□□ 0.44
PHGDH-230ENST00000641927 HINFPQ9BQA5 517 aa17.81■□□□□ 0.44
PHGDH-230ENST00000641927 RHOXF2Q9BQY4 288 aa17.81■□□□□ 0.44
PHGDH-230ENST00000641927 TRPV5Q9NQA5 729 aa17.81■□□□□ 0.44
PHGDH-230ENST00000641927 RBM22Q9NW64 420 aaKnown RBP eCLIP17.81■□□□□ 0.44
PHGDH-230ENST00000641927 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.81■□□□□ 0.44
PHGDH-230ENST00000641927 ASIC3Q9UHC3 531 aa17.81■□□□□ 0.44
PHGDH-230ENST00000641927 SLC25A13Q9UJS0 675 aa17.81■□□□□ 0.44
PHGDH-230ENST00000641927 V9GYY5 206 aaPredicted RBP17.81■□□□□ 0.44
PHGDH-230ENST00000641927 CHD5Q8TDI0 1954 aa17.81■□□□□ 0.44
PHGDH-230ENST00000641927 SPECC1L-ADORA2AF8WAN1 911 aa17.8■□□□□ 0.44
PHGDH-230ENST00000641927 PEX11BO96011 259 aa17.8■□□□□ 0.44
PHGDH-230ENST00000641927 MMP13P45452 471 aa17.8■□□□□ 0.44
PHGDH-230ENST00000641927 IFI35P80217 286 aaPredicted RBP17.8■□□□□ 0.44
PHGDH-230ENST00000641927 ECT2LQ008S8 904 aa17.8■□□□□ 0.44
PHGDH-230ENST00000641927 SULT2A1Q06520 285 aa17.8■□□□□ 0.44
PHGDH-230ENST00000641927 HNRNPDQ14103 355 aaKnown RBP17.8■□□□□ 0.44
PHGDH-230ENST00000641927 P3H1Q32P28 736 aa17.8■□□□□ 0.44
PHGDH-230ENST00000641927 ANKRD20A2Q5SQ80 823 aa17.8■□□□□ 0.44
PHGDH-230ENST00000641927 ANKRD20A1Q5TYW2 823 aa17.8■□□□□ 0.44
PHGDH-230ENST00000641927 ANKRD20A3Q5VUR7 823 aa17.8■□□□□ 0.44
PHGDH-230ENST00000641927 TMEM215Q68D42 235 aa17.8■□□□□ 0.44
PHGDH-230ENST00000641927 ARHGEF18Q6ZSZ5 1173 aa17.8■□□□□ 0.44
PHGDH-230ENST00000641927 KIAA0907Q7Z7F0 614 aaPredicted RBP17.8■□□□□ 0.44
PHGDH-230ENST00000641927 ZNF567Q8N184 647 aa17.8■□□□□ 0.44
PHGDH-230ENST00000641927 TERB1Q8NA31 727 aa17.8■□□□□ 0.44
PHGDH-230ENST00000641927 ATP11CQ8NB49 1132 aa17.8■□□□□ 0.44
PHGDH-230ENST00000641927 MAML1Q92585 1016 aa17.8■□□□□ 0.44
PHGDH-230ENST00000641927 RPL10LQ96L21 214 aaKnown RBP17.8■□□□□ 0.44
PHGDH-230ENST00000641927 ZNF599Q96NL3 588 aa17.8■□□□□ 0.44
PHGDH-230ENST00000641927 P2RY13Q9BPV8 354 aa17.8■□□□□ 0.44
PHGDH-230ENST00000641927 TRIM31Q9BZY9 425 aa17.8■□□□□ 0.44
PHGDH-230ENST00000641927 MYO10Q9HD67 2058 aa17.8■□□□□ 0.44
PHGDH-230ENST00000641927 A0A0A0MRY4 1105 aa17.8■□□□□ 0.44
PHGDH-230ENST00000641927 C5orf60A6NFR6 353 aa17.8■□□□□ 0.44
PHGDH-230ENST00000641927 FAM187AA6NFU0 413 aa17.8■□□□□ 0.44
PHGDH-230ENST00000641927 KAT7O95251 611 aa17.8■□□□□ 0.44
PHGDH-230ENST00000641927 APODP05090 189 aa17.8■□□□□ 0.44
PHGDH-230ENST00000641927 CTHP32929 405 aa17.8■□□□□ 0.44
PHGDH-230ENST00000641927 TERF1P54274 439 aa17.8■□□□□ 0.44
PHGDH-230ENST00000641927 GEMIN4P57678 1058 aaKnown RBP17.8■□□□□ 0.44
PHGDH-230ENST00000641927 ITKQ08881 620 aa17.8■□□□□ 0.44
PHGDH-230ENST00000641927 ZNF235Q14590 738 aa17.8■□□□□ 0.44
PHGDH-230ENST00000641927 GLE1Q53GS7 698 aaKnown RBP17.8■□□□□ 0.44
PHGDH-230ENST00000641927 TEX44Q53QW1 395 aa17.8■□□□□ 0.44
PHGDH-230ENST00000641927 NUDT18Q6ZVK8 323 aa17.8■□□□□ 0.44
PHGDH-230ENST00000641927 SYDE1Q6ZW31 735 aaPredicted RBP17.8■□□□□ 0.44
PHGDH-230ENST00000641927 BBS5Q8N3I7 341 aa17.8■□□□□ 0.44
PHGDH-230ENST00000641927 CYB5D2Q8WUJ1 264 aa17.8■□□□□ 0.44
PHGDH-230ENST00000641927 SORCS1Q8WY21 1168 aa17.8■□□□□ 0.44
PHGDH-230ENST00000641927 UBXN4Q92575 508 aa17.8■□□□□ 0.44
PHGDH-230ENST00000641927 FATE1Q969F0 183 aa17.8■□□□□ 0.44
PHGDH-230ENST00000641927 RTP4Q96DX8 246 aa17.8■□□□□ 0.44
PHGDH-230ENST00000641927 SPATA13Q96N96 652 aa17.8■□□□□ 0.44
PHGDH-230ENST00000641927 ASB2Q96Q27 587 aa17.8■□□□□ 0.44
PHGDH-230ENST00000641927 VAT1Q99536 393 aa17.8■□□□□ 0.44
PHGDH-230ENST00000641927 CINPQ9BW66 212 aaPredicted RBP17.8■□□□□ 0.44
PHGDH-230ENST00000641927 C8orf33Q9H7E9 229 aaPredicted RBP17.8■□□□□ 0.44
PHGDH-230ENST00000641927 PCDH9Q9HC56 1237 aa17.8■□□□□ 0.44
PHGDH-230ENST00000641927 NT5MQ9NPB1 228 aa17.8■□□□□ 0.44
PHGDH-230ENST00000641927 UTP11Q9Y3A2 253 aaKnown RBP17.8■□□□□ 0.44
PHGDH-230ENST00000641927 MIA3Q5JRA6 1907 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms