RNA–Protein interactions for RNA: ENST00000640653.1

VEGFA-232, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,170 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-232ENST00000640653 PPP1R2P3Q6NXS1 205 aa25.79■■□□□ 1.72
VEGFA-232ENST00000640653 LINGO4Q6UY18 593 aa25.79■■□□□ 1.72
VEGFA-232ENST00000640653 DRC7Q8IY82 874 aa25.79■■□□□ 1.72
VEGFA-232ENST00000640653 NTAN1Q96AB6 310 aa25.79■■□□□ 1.72
VEGFA-232ENST00000640653 SLC6A18Q96N87 628 aa25.79■■□□□ 1.72
VEGFA-232ENST00000640653 C10orf142B7Z368 130 aa25.78■■□□□ 1.72
VEGFA-232ENST00000640653 K7ERQ8 282 aa25.78■■□□□ 1.72
VEGFA-232ENST00000640653 VILLO15195 856 aa25.78■■□□□ 1.72
VEGFA-232ENST00000640653 PLRG1O43660 514 aaKnown RBP25.78■■□□□ 1.72
VEGFA-232ENST00000640653 TRIM16O95361 564 aa25.78■■□□□ 1.72
VEGFA-232ENST00000640653 RHOQP17081 205 aa25.78■■□□□ 1.72
VEGFA-232ENST00000640653 TNFAIP3P21580 790 aa25.78■■□□□ 1.72
VEGFA-232ENST00000640653 ETFBP38117 255 aa25.78■■□□□ 1.72
VEGFA-232ENST00000640653 RECQLP46063 649 aaPredicted RBP25.78■■□□□ 1.72
VEGFA-232ENST00000640653 MAPKAPK2P49137 400 aa25.78■■□□□ 1.72
VEGFA-232ENST00000640653 SLC20A2Q08357 652 aa25.78■■□□□ 1.72
VEGFA-232ENST00000640653 CCDC15Q0P6D6 951 aa25.78■■□□□ 1.72
VEGFA-232ENST00000640653 CNTN1Q12860 1018 aa25.78■■□□□ 1.72
VEGFA-232ENST00000640653 SUZ12Q15022 739 aaKnown RBP25.78■■□□□ 1.72
VEGFA-232ENST00000640653 POM121L1PQ3SYA9 428 aa25.78■■□□□ 1.72
VEGFA-232ENST00000640653 ACAD10Q6JQN1 1059 aa25.78■■□□□ 1.72
VEGFA-232ENST00000640653 C22orf39Q6P5X5 142 aa25.78■■□□□ 1.72
VEGFA-232ENST00000640653 LAYNQ6UX15 382 aa25.78■■□□□ 1.72
VEGFA-232ENST00000640653 IRF2BP2Q7Z5L9 587 aa25.78■■□□□ 1.72
VEGFA-232ENST00000640653 OR2A12Q8NGT7 310 aa25.78■■□□□ 1.72
VEGFA-232ENST00000640653 SETD7Q8WTS6 366 aaKnown RBP25.78■■□□□ 1.72
VEGFA-232ENST00000640653 BAP1Q92560 729 aa25.78■■□□□ 1.72
VEGFA-232ENST00000640653 EBF2Q9HAK2 575 aa25.78■■□□□ 1.72
VEGFA-232ENST00000640653 AASDHPPTQ9NRN7 309 aa25.78■■□□□ 1.72
VEGFA-232ENST00000640653 WASF3Q9UPY6 502 aa25.78■■□□□ 1.72
VEGFA-232ENST00000640653 PLK4O00444 970 aa25.77■■□□□ 1.72
VEGFA-232ENST00000640653 SMAD6O43541 496 aaKnown RBP25.77■■□□□ 1.72
VEGFA-232ENST00000640653 RTN2O75298 545 aa25.77■■□□□ 1.72
VEGFA-232ENST00000640653 PRNPP04156 253 aa25.77■■□□□ 1.72
VEGFA-232ENST00000640653 PLEKP08567 350 aaPredicted RBP25.77■■□□□ 1.72
VEGFA-232ENST00000640653 DESP17661 470 aa25.77■■□□□ 1.72
VEGFA-232ENST00000640653 GLDCP23378 1020 aa25.77■■□□□ 1.72
VEGFA-232ENST00000640653 CHRNA3P32297 505 aa25.77■■□□□ 1.72
VEGFA-232ENST00000640653 CTSKP43235 329 aa25.77■■□□□ 1.72
VEGFA-232ENST00000640653 FAM193AP78312 1265 aa25.77■■□□□ 1.72
VEGFA-232ENST00000640653 AGBL4Q5VU57 503 aa25.77■■□□□ 1.72
VEGFA-232ENST00000640653 PRPF39Q86UA1 669 aaKnown RBP25.77■■□□□ 1.72
VEGFA-232ENST00000640653 CCDC185Q8N715 623 aa25.77■■□□□ 1.72
VEGFA-232ENST00000640653 TMIEQ8NEW7 156 aa25.77■■□□□ 1.72
VEGFA-232ENST00000640653 TBC1D31Q96DN5 1066 aa25.77■■□□□ 1.72
VEGFA-232ENST00000640653 SERAC1Q96JX3 654 aa25.77■■□□□ 1.72
VEGFA-232ENST00000640653 MCEEQ96PE7 176 aa25.77■■□□□ 1.72
VEGFA-232ENST00000640653 CEP44Q9C0F1 390 aa25.77■■□□□ 1.72
VEGFA-232ENST00000640653 DYRK4Q9NR20 520 aa25.77■■□□□ 1.72
VEGFA-232ENST00000640653 A0A1W2PQC6 194 aa25.76■■□□□ 1.71
VEGFA-232ENST00000640653 TCRBV5S1A1TA0A578 114 aa25.76■■□□□ 1.71
VEGFA-232ENST00000640653 FLRT2O43155 660 aa25.76■■□□□ 1.71
VEGFA-232ENST00000640653 LATO43561 262 aa25.76■■□□□ 1.71
VEGFA-232ENST00000640653 DFNA5O60443 496 aa25.76■■□□□ 1.71
VEGFA-232ENST00000640653 LRIG2O94898 1065 aa25.76■■□□□ 1.71
VEGFA-232ENST00000640653 CD38P28907 300 aa25.76■■□□□ 1.71
VEGFA-232ENST00000640653 NUDT1P36639 197 aa25.76■■□□□ 1.71
VEGFA-232ENST00000640653 SERPINH1P50454 418 aaKnown RBP25.76■■□□□ 1.71
VEGFA-232ENST00000640653 CCT8P50990 548 aa25.76■■□□□ 1.71
VEGFA-232ENST00000640653 ZNF143P52747 638 aaPredicted RBP25.76■■□□□ 1.71
VEGFA-232ENST00000640653 ZNF423Q2M1K9 1284 aa25.76■■□□□ 1.71
VEGFA-232ENST00000640653 SLC45A4Q5BKX6 768 aa25.76■■□□□ 1.71
VEGFA-232ENST00000640653 DCUN1D2Q6PH85 259 aa25.76■■□□□ 1.71
VEGFA-232ENST00000640653 SLFN11Q7Z7L1 901 aa25.76■■□□□ 1.71
VEGFA-232ENST00000640653 MCOLN2Q8IZK6 566 aa25.76■■□□□ 1.71
VEGFA-232ENST00000640653 TMEM248Q9NWD8 314 aa25.76■■□□□ 1.71
VEGFA-232ENST00000640653 PCOLCE2Q9UKZ9 415 aa25.76■■□□□ 1.71
VEGFA-232ENST00000640653 A0A1B0GTH6 734 aa25.75■■□□□ 1.71
VEGFA-232ENST00000640653 CXorf51AA0A1B0GTR3 108 aa25.75■■□□□ 1.71
VEGFA-232ENST00000640653 LRRC53A6NM62 1247 aa25.75■■□□□ 1.71
VEGFA-232ENST00000640653 FAM72CH0Y354 149 aa25.75■■□□□ 1.71
VEGFA-232ENST00000640653 KPNA3O00505 521 aaPredicted RBP25.75■■□□□ 1.71
VEGFA-232ENST00000640653 CCP110O43303 1012 aa25.75■■□□□ 1.71
VEGFA-232ENST00000640653 ZMPSTE24O75844 475 aa25.75■■□□□ 1.71
VEGFA-232ENST00000640653 CTSLP07711 333 aa25.75■■□□□ 1.71
VEGFA-232ENST00000640653 PPP2CBP62714 309 aa25.75■■□□□ 1.71
VEGFA-232ENST00000640653 PPP2CAP67775 309 aa25.75■■□□□ 1.71
VEGFA-232ENST00000640653 SCAPQ12770 1279 aa25.75■■□□□ 1.71
VEGFA-232ENST00000640653 ASIC2Q16515 512 aa25.75■■□□□ 1.71
VEGFA-232ENST00000640653 EFHC2Q5JST6 749 aa25.75■■□□□ 1.71
VEGFA-232ENST00000640653 FAM72AQ5TYM5 149 aa25.75■■□□□ 1.71
VEGFA-232ENST00000640653 FAM72DQ6L9T8 149 aa25.75■■□□□ 1.71
VEGFA-232ENST00000640653 DBX2Q6ZNG2 339 aa25.75■■□□□ 1.71
VEGFA-232ENST00000640653 NLRP14Q86W24 1093 aa25.75■■□□□ 1.71
VEGFA-232ENST00000640653 FAM72BQ86X60 149 aa25.75■■□□□ 1.71
VEGFA-232ENST00000640653 PCDH20Q8N6Y1 951 aaKnown RBP25.75■■□□□ 1.71
VEGFA-232ENST00000640653 VCPIP1Q96JH7 1222 aa25.75■■□□□ 1.71
VEGFA-232ENST00000640653 FUCA2Q9BTY2 467 aa25.75■■□□□ 1.71
VEGFA-232ENST00000640653 SCNM1Q9BWG6 230 aa25.75■■□□□ 1.71
VEGFA-232ENST00000640653 TNKS2Q9H2K2 1166 aa25.75■■□□□ 1.71
VEGFA-232ENST00000640653 PREBQ9HCU5 417 aa25.75■■□□□ 1.71
VEGFA-232ENST00000640653 IL36AQ9UHA7 158 aa25.75■■□□□ 1.71
VEGFA-232ENST00000640653 DOCK4Q8N1I0 1966 aa25.75■■□□□ 1.71
VEGFA-232ENST00000640653 CBFA2T3O75081 653 aa25.74■■□□□ 1.71
VEGFA-232ENST00000640653 SERPINC1P01008 464 aa25.74■■□□□ 1.71
VEGFA-232ENST00000640653 GEMIN4P57678 1058 aaKnown RBP25.74■■□□□ 1.71
VEGFA-232ENST00000640653 TPM4P67936 248 aa25.74■■□□□ 1.71
VEGFA-232ENST00000640653 ARF5P84085 180 aa25.74■■□□□ 1.71
VEGFA-232ENST00000640653 IQCB1Q15051 598 aa25.74■■□□□ 1.71
VEGFA-232ENST00000640653 KLHL40Q2TBA0 621 aa25.74■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms