RNA–Protein interactions for RNA: ENST00000640289.1

GTF3A-209, Transcript of general transcription factor IIIA, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-209ENST00000640289 C17orf53Q8N3J3 647 aaPredicted RBP13.48□□□□□ -0.25
GTF3A-209ENST00000640289 SH2D3CQ8N5H7 860 aa13.48□□□□□ -0.25
GTF3A-209ENST00000640289 UBL4BQ8N7F7 174 aa13.48□□□□□ -0.25
GTF3A-209ENST00000640289 ATP11CQ8NB49 1132 aa13.48□□□□□ -0.25
GTF3A-209ENST00000640289 KDM1BQ8NB78 822 aa13.48□□□□□ -0.25
GTF3A-209ENST00000640289 TRIM58Q8NG06 486 aa13.48□□□□□ -0.25
GTF3A-209ENST00000640289 FRS2Q8WU20 508 aa13.48□□□□□ -0.25
GTF3A-209ENST00000640289 LRRN4Q8WUT4 740 aa13.48□□□□□ -0.25
GTF3A-209ENST00000640289 HEMGNQ9BXL5 484 aa13.48□□□□□ -0.25
GTF3A-209ENST00000640289 PRMT8Q9NR22 394 aaPredicted RBP13.48□□□□□ -0.25
GTF3A-209ENST00000640289 HPCAL4Q9UM19 191 aa13.48□□□□□ -0.25
GTF3A-209ENST00000640289 HS3ST2Q9Y278 367 aa13.48□□□□□ -0.25
GTF3A-209ENST00000640289 FCF1Q9Y324 198 aaKnown RBP13.48□□□□□ -0.25
GTF3A-209ENST00000640289 DOCK4Q8N1I0 1966 aa13.48□□□□□ -0.25
GTF3A-209ENST00000640289 TCRBV21S2A2A0A5A6 115 aa13.47□□□□□ -0.25
GTF3A-209ENST00000640289 GALR2O43603 387 aaPredicted RBP13.47□□□□□ -0.25
GTF3A-209ENST00000640289 ATP9BO43861 1147 aa13.47□□□□□ -0.25
GTF3A-209ENST00000640289 CST8O60676 142 aa13.47□□□□□ -0.25
GTF3A-209ENST00000640289 SIN3BO75182 1162 aa13.47□□□□□ -0.25
GTF3A-209ENST00000640289 NNMTP40261 264 aa13.47□□□□□ -0.25
GTF3A-209ENST00000640289 SERPINH1P50454 418 aaKnown RBP13.47□□□□□ -0.25
GTF3A-209ENST00000640289 VASPP50552 380 aaPredicted RBP13.47□□□□□ -0.25
GTF3A-209ENST00000640289 CSTF1Q05048 431 aaKnown RBP13.47□□□□□ -0.25
GTF3A-209ENST00000640289 DMWDQ09019 674 aa13.47□□□□□ -0.25
GTF3A-209ENST00000640289 E2F5Q15329 346 aa13.47□□□□□ -0.25
GTF3A-209ENST00000640289 ANGPT1Q15389 498 aa13.47□□□□□ -0.25
GTF3A-209ENST00000640289 DLG2Q15700 870 aa13.47□□□□□ -0.25
GTF3A-209ENST00000640289 HNRNPA1L2Q32P51 320 aaKnown RBP13.47□□□□□ -0.25
GTF3A-209ENST00000640289 SLC35F6Q8N357 371 aa13.47□□□□□ -0.25
GTF3A-209ENST00000640289 TSTD1Q8NFU3 115 aa13.47□□□□□ -0.25
GTF3A-209ENST00000640289 PTPRN2Q92932 1015 aa13.47□□□□□ -0.25
GTF3A-209ENST00000640289 TLR10Q9BXR5 811 aa13.47□□□□□ -0.25
GTF3A-209ENST00000640289 SLC6A17Q9H1V8 727 aa13.47□□□□□ -0.25
GTF3A-209ENST00000640289 PDFQ9HBH1 243 aa13.47□□□□□ -0.25
GTF3A-209ENST00000640289 PRSS16Q9NQE7 514 aa13.47□□□□□ -0.25
GTF3A-209ENST00000640289 DTLQ9NZJ0 730 aa13.47□□□□□ -0.25
GTF3A-209ENST00000640289 IPO11Q9UI26 975 aaKnown RBP13.47□□□□□ -0.25
GTF3A-209ENST00000640289 HEY1Q9Y5J3 304 aa13.47□□□□□ -0.25
GTF3A-209ENST00000640289 KMT2EQ8IZD2 1858 aa13.46□□□□□ -0.25
GTF3A-209ENST00000640289 EDDM13A0A1B0GTR0 161 aa13.46□□□□□ -0.25
GTF3A-209ENST00000640289 BNIP3LO60238 219 aa13.46□□□□□ -0.25
GTF3A-209ENST00000640289 SYNCRIPO60506 623 aaKnown RBP13.46□□□□□ -0.25
GTF3A-209ENST00000640289 MAFKO60675 156 aa13.46□□□□□ -0.25
GTF3A-209ENST00000640289 PRAMEF11O60813 436 aa13.46□□□□□ -0.25
GTF3A-209ENST00000640289 ZNF821O75541 412 aaPredicted RBP13.46□□□□□ -0.25
GTF3A-209ENST00000640289 PAPSS2O95340 614 aaPredicted RBP13.46□□□□□ -0.25
GTF3A-209ENST00000640289 TDGF1P13385 188 aa13.46□□□□□ -0.25
GTF3A-209ENST00000640289 PECAM1P16284 738 aaPredicted RBP13.46□□□□□ -0.25
GTF3A-209ENST00000640289 DGKEP52429 567 aa13.46□□□□□ -0.25
GTF3A-209ENST00000640289 COPAP53621 1224 aa13.46□□□□□ -0.25
GTF3A-209ENST00000640289 GALNT2Q10471 571 aa13.46□□□□□ -0.25
GTF3A-209ENST00000640289 STARD3Q14849 445 aa13.46□□□□□ -0.25
GTF3A-209ENST00000640289 RPS6KA1Q15418 735 aa13.46□□□□□ -0.25
GTF3A-209ENST00000640289 PPP2R5EQ16537 467 aa13.46□□□□□ -0.25
GTF3A-209ENST00000640289 ZNF569Q5MCW4 686 aa13.46□□□□□ -0.25
GTF3A-209ENST00000640289 C9orf64Q5T6V5 341 aa13.46□□□□□ -0.25
GTF3A-209ENST00000640289 ANO7Q6IWH7 933 aa13.46□□□□□ -0.25
GTF3A-209ENST00000640289 C22orf39Q6P5X5 142 aa13.46□□□□□ -0.25
GTF3A-209ENST00000640289 Q6ZVU0 165 aa13.46□□□□□ -0.25
GTF3A-209ENST00000640289 ATPAF2Q8N5M1 289 aa13.46□□□□□ -0.25
GTF3A-209ENST00000640289 HMGB4Q8WW32 186 aa13.46□□□□□ -0.25
GTF3A-209ENST00000640289 HAUS1Q96CS2 278 aa13.46□□□□□ -0.25
GTF3A-209ENST00000640289 OSBPL8Q9BZF1 889 aa13.46□□□□□ -0.25
GTF3A-209ENST00000640289 TNKS2Q9H2K2 1166 aa13.46□□□□□ -0.25
GTF3A-209ENST00000640289 SP110Q9HB58 689 aa13.46□□□□□ -0.25
GTF3A-209ENST00000640289 POLMQ9NP87 494 aaPredicted RBP13.46□□□□□ -0.25
GTF3A-209ENST00000640289 SAE1Q9UBE0 346 aaPredicted RBP13.46□□□□□ -0.25
GTF3A-209ENST00000640289 SUN2Q9UH99 717 aa13.46□□□□□ -0.25
GTF3A-209ENST00000640289 ZSCAN5CA6NGD5 496 aaPredicted RBP13.45□□□□□ -0.26
GTF3A-209ENST00000640289 ENC1O14682 589 aa13.45□□□□□ -0.26
GTF3A-209ENST00000640289 TMCC1O94876 653 aa13.45□□□□□ -0.26
GTF3A-209ENST00000640289 ZFXP17010 805 aaPredicted RBP13.45□□□□□ -0.26
GTF3A-209ENST00000640289 GABRG2P18507 467 aa13.45□□□□□ -0.26
GTF3A-209ENST00000640289 NDUFV2P19404 249 aa13.45□□□□□ -0.26
GTF3A-209ENST00000640289 PTPN7P35236 360 aa13.45□□□□□ -0.26
GTF3A-209ENST00000640289 GARSP41250 739 aaKnown RBP13.45□□□□□ -0.26
GTF3A-209ENST00000640289 CLCN6P51797 869 aa13.45□□□□□ -0.26
GTF3A-209ENST00000640289 COPS2P61201 443 aa13.45□□□□□ -0.26
GTF3A-209ENST00000640289 IL10RBQ08334 325 aa13.45□□□□□ -0.26
GTF3A-209ENST00000640289 SLC20A2Q08357 652 aa13.45□□□□□ -0.26
GTF3A-209ENST00000640289 CAMK2GQ13555 558 aaPredicted RBP13.45□□□□□ -0.26
GTF3A-209ENST00000640289 TFDP2Q14188 446 aa13.45□□□□□ -0.26
GTF3A-209ENST00000640289 CYTH1Q15438 398 aa13.45□□□□□ -0.26
GTF3A-209ENST00000640289 HEATR6Q6AI08 1181 aaKnown RBP13.45□□□□□ -0.26
GTF3A-209ENST00000640289 BBS12Q6ZW61 710 aa13.45□□□□□ -0.26
GTF3A-209ENST00000640289 B4GALNT4Q76KP1 1039 aa13.45□□□□□ -0.26
GTF3A-209ENST00000640289 CACUL1Q86Y37 369 aa13.45□□□□□ -0.26
GTF3A-209ENST00000640289 STK40Q8N2I9 435 aa13.45□□□□□ -0.26
GTF3A-209ENST00000640289 PRSS33Q8NF86 280 aa13.45□□□□□ -0.26
GTF3A-209ENST00000640289 MDGA1Q8NFP4 955 aa13.45□□□□□ -0.26
GTF3A-209ENST00000640289 TPSD1Q9BZJ3 242 aa13.45□□□□□ -0.26
GTF3A-209ENST00000640289 TM6SF2Q9BZW4 377 aa13.45□□□□□ -0.26
GTF3A-209ENST00000640289 MKRN2Q9H000 416 aaKnown RBP13.45□□□□□ -0.26
GTF3A-209ENST00000640289 UBA2Q9UBT2 640 aaPredicted RBP13.45□□□□□ -0.26
GTF3A-209ENST00000640289 CXorf51AA0A1B0GTR3 108 aa13.44□□□□□ -0.26
GTF3A-209ENST00000640289 TARSL2A2RTX5 802 aaKnown RBP13.44□□□□□ -0.26
GTF3A-209ENST00000640289 GOLGA6L9A6NEM1 432 aa13.44□□□□□ -0.26
GTF3A-209ENST00000640289 KCNK3O14649 394 aa13.44□□□□□ -0.26
GTF3A-209ENST00000640289 KIF5CO60282 957 aa13.44□□□□□ -0.26
GTF3A-209ENST00000640289 APBB3O95704 486 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms