RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 LIMK1P53667 647 aa16.05■□□□□ 0.16
LINC00339-207ENST00000634712 POLD3Q15054 466 aaPredicted RBP16.05■□□□□ 0.16
LINC00339-207ENST00000634712 ARTNQ5T4W7 220 aa16.05■□□□□ 0.16
LINC00339-207ENST00000634712 PEAR1Q5VY43 1037 aaPredicted RBP16.05■□□□□ 0.16
LINC00339-207ENST00000634712 NLRP14Q86W24 1093 aa16.05■□□□□ 0.16
LINC00339-207ENST00000634712 TRIM5Q9C035 493 aa16.05■□□□□ 0.16
LINC00339-207ENST00000634712 NEUROG2Q9H2A3 272 aa16.05■□□□□ 0.16
LINC00339-207ENST00000634712 DHX35Q9H5Z1 703 aaKnown RBP16.05■□□□□ 0.16
LINC00339-207ENST00000634712 ARHGAP20Q9P2F6 1191 aa16.05■□□□□ 0.16
LINC00339-207ENST00000634712 ZNF212Q9UDV6 495 aa16.05■□□□□ 0.16
LINC00339-207ENST00000634712 AP4E1Q9UPM8 1137 aa16.05■□□□□ 0.16
LINC00339-207ENST00000634712 LNP1A1A4G5 178 aa16.04■□□□□ 0.16
LINC00339-207ENST00000634712 LRRC72A6NJI9 287 aa16.04■□□□□ 0.16
LINC00339-207ENST00000634712 K7ERQ8 282 aa16.04■□□□□ 0.16
LINC00339-207ENST00000634712 MCF2LO15068 1137 aa16.04■□□□□ 0.16
LINC00339-207ENST00000634712 ALOX15BO15296 676 aa16.04■□□□□ 0.16
LINC00339-207ENST00000634712 DAPK3O43293 454 aa16.04■□□□□ 0.16
LINC00339-207ENST00000634712 FSBPO95073 299 aa16.04■□□□□ 0.16
LINC00339-207ENST00000634712 GOT1P17174 413 aa16.04■□□□□ 0.16
LINC00339-207ENST00000634712 HNRNPH3P31942 346 aaKnown RBP16.04■□□□□ 0.16
LINC00339-207ENST00000634712 HTR7P34969 479 aa16.04■□□□□ 0.16
LINC00339-207ENST00000634712 EIF4A3P38919 411 aaKnown RBP16.04■□□□□ 0.16
LINC00339-207ENST00000634712 DNA2P51530 1060 aa16.04■□□□□ 0.16
LINC00339-207ENST00000634712 GEMIN4P57678 1058 aaKnown RBP16.04■□□□□ 0.16
LINC00339-207ENST00000634712 TPI1P60174 286 aa16.04■□□□□ 0.16
LINC00339-207ENST00000634712 ACAP1Q15027 740 aa16.04■□□□□ 0.16
LINC00339-207ENST00000634712 DAB2IPQ5VWQ8 1189 aa16.04■□□□□ 0.16
LINC00339-207ENST00000634712 RTL3Q8N8U3 475 aaKnown RBP16.04■□□□□ 0.16
LINC00339-207ENST00000634712 DNASE2BQ8WZ79 361 aa16.04■□□□□ 0.16
LINC00339-207ENST00000634712 ARHGEF2Q92974 986 aaKnown RBP16.04■□□□□ 0.16
LINC00339-207ENST00000634712 TRIM7Q9C029 511 aa16.04■□□□□ 0.16
LINC00339-207ENST00000634712 THAP2Q9H0W7 228 aa16.04■□□□□ 0.16
LINC00339-207ENST00000634712 C6orf106Q9H6K1 298 aaPredicted RBP16.04■□□□□ 0.16
LINC00339-207ENST00000634712 TMEM9BQ9NQ34 198 aa16.04■□□□□ 0.16
LINC00339-207ENST00000634712 NDFIP2Q9NV92 336 aa16.04■□□□□ 0.16
LINC00339-207ENST00000634712 EIF2B4Q9UI10 523 aaKnown RBP16.04■□□□□ 0.16
LINC00339-207ENST00000634712 FZD4Q9ULV1 537 aa16.04■□□□□ 0.16
LINC00339-207ENST00000634712 A0A1B0GTW7 788 aa16.03■□□□□ 0.16
LINC00339-207ENST00000634712 DCDC2BA2VCK2 349 aa16.03■□□□□ 0.16
LINC00339-207ENST00000634712 C4orf47A7E2U8 309 aa16.03■□□□□ 0.16
LINC00339-207ENST00000634712 EIF3CLB5ME19 914 aaKnown RBP16.03■□□□□ 0.16
LINC00339-207ENST00000634712 FGF10O15520 208 aaPredicted RBP16.03■□□□□ 0.16
LINC00339-207ENST00000634712 SMAD6O43541 496 aaKnown RBP16.03■□□□□ 0.16
LINC00339-207ENST00000634712 SYPP08247 313 aa16.03■□□□□ 0.16
LINC00339-207ENST00000634712 ENGP17813 658 aa16.03■□□□□ 0.16
LINC00339-207ENST00000634712 MIPP30301 263 aa16.03■□□□□ 0.16
LINC00339-207ENST00000634712 ACVRL1P37023 503 aa16.03■□□□□ 0.16
LINC00339-207ENST00000634712 CCDC15Q0P6D6 951 aa16.03■□□□□ 0.16
LINC00339-207ENST00000634712 PIGHQ14442 188 aaPredicted RBP16.03■□□□□ 0.16
LINC00339-207ENST00000634712 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.03■□□□□ 0.16
LINC00339-207ENST00000634712 OR14C36Q8NHC7 312 aa16.03■□□□□ 0.16
LINC00339-207ENST00000634712 PIP4K2CQ8TBX8 421 aa16.03■□□□□ 0.16
LINC00339-207ENST00000634712 EIF3CQ99613 913 aaKnown RBP16.03■□□□□ 0.16
LINC00339-207ENST00000634712 DNAJC7Q99615 494 aa16.03■□□□□ 0.16
LINC00339-207ENST00000634712 NUP85Q9BW27 656 aa16.03■□□□□ 0.16
LINC00339-207ENST00000634712 GTPBP2Q9BX10 602 aaKnown RBP16.03■□□□□ 0.16
LINC00339-207ENST00000634712 ACE2Q9BYF1 805 aaPredicted RBP16.03■□□□□ 0.16
LINC00339-207ENST00000634712 CEP44Q9C0F1 390 aa16.03■□□□□ 0.16
LINC00339-207ENST00000634712 DYRK4Q9NR20 520 aa16.03■□□□□ 0.16
LINC00339-207ENST00000634712 GPATCH2LQ9NWQ4 482 aa16.03■□□□□ 0.16
LINC00339-207ENST00000634712 PI4KAP42356 2102 aa16.03■□□□□ 0.16
LINC00339-207ENST00000634712 EEF2KO00418 725 aaKnown RBP16.02■□□□□ 0.16
LINC00339-207ENST00000634712 BCAT2O15382 392 aaPredicted RBP16.02■□□□□ 0.16
LINC00339-207ENST00000634712 AKR1B10O60218 316 aa16.02■□□□□ 0.16
LINC00339-207ENST00000634712 ZMPSTE24O75844 475 aa16.02■□□□□ 0.16
LINC00339-207ENST00000634712 CHRNA3P32297 505 aa16.02■□□□□ 0.16
LINC00339-207ENST00000634712 MAPK8P45983 427 aa16.02■□□□□ 0.16
LINC00339-207ENST00000634712 SERPINH1P50454 418 aaKnown RBP16.02■□□□□ 0.16
LINC00339-207ENST00000634712 GALCP54803 685 aa16.02■□□□□ 0.16
LINC00339-207ENST00000634712 ADKP55263 362 aaKnown RBP16.02■□□□□ 0.16
LINC00339-207ENST00000634712 YBEYP58557 167 aaPredicted RBP16.02■□□□□ 0.16
LINC00339-207ENST00000634712 ZNF252P-AS1Q0IIN9 211 aa16.02■□□□□ 0.16
LINC00339-207ENST00000634712 C22orf39Q6P5X5 142 aa16.02■□□□□ 0.16
LINC00339-207ENST00000634712 ERMP1Q7Z2K6 904 aa16.02■□□□□ 0.16
LINC00339-207ENST00000634712 PSTKQ8IV42 348 aaKnown RBP16.02■□□□□ 0.16
LINC00339-207ENST00000634712 ZCCHC9Q8N567 271 aaKnown RBP16.02■□□□□ 0.16
LINC00339-207ENST00000634712 AADATQ8N5Z0 425 aa16.02■□□□□ 0.16
LINC00339-207ENST00000634712 PCDH20Q8N6Y1 951 aaKnown RBP16.02■□□□□ 0.16
LINC00339-207ENST00000634712 SNRNP25Q9BV90 132 aaKnown RBP16.02■□□□□ 0.16
LINC00339-207ENST00000634712 TNKS2Q9H2K2 1166 aa16.02■□□□□ 0.16
LINC00339-207ENST00000634712 SERGEFQ9UGK8 458 aa16.02■□□□□ 0.16
LINC00339-207ENST00000634712 IP6K2Q9UHH9 426 aa16.02■□□□□ 0.16
LINC00339-207ENST00000634712 ANAPC7Q9UJX3 599 aa16.02■□□□□ 0.16
LINC00339-207ENST00000634712 PPM1HQ9ULR3 514 aa16.02■□□□□ 0.16
LINC00339-207ENST00000634712 TNRC6BQ9UPQ9 1833 aaKnown RBP16.02■□□□□ 0.16
LINC00339-207ENST00000634712 NUMA1Q14980 2115 aa16.02■□□□□ 0.15
LINC00339-207ENST00000634712 TBC1D3DA0A087WVF3 549 aa16.01■□□□□ 0.15
LINC00339-207ENST00000634712 TBC1D3IA0A087WXS9 549 aa16.01■□□□□ 0.15
LINC00339-207ENST00000634712 TBC1D3EA0A087X179 549 aa16.01■□□□□ 0.15
LINC00339-207ENST00000634712 TBC1D3KA0A087X1G2 549 aa16.01■□□□□ 0.15
LINC00339-207ENST00000634712 CXorf51AA0A1B0GTR3 108 aa16.01■□□□□ 0.15
LINC00339-207ENST00000634712 TBC1D3FA6NER0 549 aaPredicted RBP16.01■□□□□ 0.15
LINC00339-207ENST00000634712 ZSCAN5CA6NGD5 496 aaPredicted RBP16.01■□□□□ 0.15
LINC00339-207ENST00000634712 WASH4PA8MWX3 477 aa16.01■□□□□ 0.15
LINC00339-207ENST00000634712 TBC1D3LB9A6J9 549 aa16.01■□□□□ 0.15
LINC00339-207ENST00000634712 MYO1FO00160 1098 aa16.01■□□□□ 0.15
LINC00339-207ENST00000634712 BUB1O43683 1085 aa16.01■□□□□ 0.15
LINC00339-207ENST00000634712 KDELR3O43731 214 aa16.01■□□□□ 0.15
LINC00339-207ENST00000634712 LRCH4O75427 683 aa16.01■□□□□ 0.15
LINC00339-207ENST00000634712 PRNPP04156 253 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms