RNA–Protein interactions for RNA: ENST00000622963.3

SNHG5-213, Transcript of small nucleolar RNA host gene 5, human

TSL 5 BASIC

Gene SNHG5, Length 753 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG5-213	ENST00000622963	NUDT1	P36639	197 aa		12.02	□□□□□ -0.49
SNHG5-213	ENST00000622963	DUSP3	P51452	185 aa	Predicted RBP	12.02	□□□□□ -0.49
SNHG5-213	ENST00000622963	BST2	Q10589	180 aa	Known RBP	12.02	□□□□□ -0.49
SNHG5-213	ENST00000622963	ZNF177	Q13360	481 aa	Predicted RBP	12.02	□□□□□ -0.49
SNHG5-213	ENST00000622963	CUL4A	Q13619	759 aa		12.02	□□□□□ -0.49
SNHG5-213	ENST00000622963	FGL2	Q14314	439 aa		12.02	□□□□□ -0.49
SNHG5-213	ENST00000622963	FZD2	Q14332	565 aa		12.02	□□□□□ -0.49
SNHG5-213	ENST00000622963	HS1BP3	Q53T59	392 aa		12.02	□□□□□ -0.49
SNHG5-213	ENST00000622963	NUGGC	Q68CJ6	796 aa		12.02	□□□□□ -0.49
SNHG5-213	ENST00000622963	SEL1L3	Q68CR1	1132 aa		12.02	□□□□□ -0.49
SNHG5-213	ENST00000622963	HIST2H2BC	Q6DN03	193 aa		12.02	□□□□□ -0.49
SNHG5-213	ENST00000622963	ABI3BP	Q7Z7G0	1075 aa		12.02	□□□□□ -0.49
SNHG5-213	ENST00000622963	B3GNT8	Q7Z7M8	397 aa		12.02	□□□□□ -0.49
SNHG5-213	ENST00000622963	DQX1	Q8TE96	717 aa	Known RBP	12.02	□□□□□ -0.49
SNHG5-213	ENST00000622963	HTR3C	Q8WXA8	447 aa		12.02	□□□□□ -0.49
SNHG5-213	ENST00000622963	SLC39A13	Q96H72	371 aa		12.02	□□□□□ -0.49
SNHG5-213	ENST00000622963	IPO9	Q96P70	1041 aa	Known RBP	12.02	□□□□□ -0.49
SNHG5-213	ENST00000622963	SPAG5	Q96R06	1193 aa		12.02	□□□□□ -0.49
SNHG5-213	ENST00000622963	ZSWIM1	Q9BR11	485 aa		12.02	□□□□□ -0.49
SNHG5-213	ENST00000622963	DNAJC28	Q9NX36	388 aa		12.02	□□□□□ -0.49
SNHG5-213	ENST00000622963	EME2	A4GXA9	379 aa	Predicted RBP	12.01	□□□□□ -0.49
SNHG5-213	ENST00000622963	CLEC18A	A5D8T8	446 aa		12.01	□□□□□ -0.49
SNHG5-213	ENST00000622963		O00370	1275 aa		12.01	□□□□□ -0.49
SNHG5-213	ENST00000622963	PDXK	O00764	312 aa		12.01	□□□□□ -0.49
SNHG5-213	ENST00000622963	SPTLC2	O15270	562 aa		12.01	□□□□□ -0.49
SNHG5-213	ENST00000622963	RAD51B	O15315	384 aa		12.01	□□□□□ -0.49
SNHG5-213	ENST00000622963	CALCA	P01258	141 aa		12.01	□□□□□ -0.49
SNHG5-213	ENST00000622963	AFP	P02771	609 aa	Known RBP	12.01	□□□□□ -0.49
SNHG5-213	ENST00000622963	NTRK1	P04629	796 aa		12.01	□□□□□ -0.49
SNHG5-213	ENST00000622963	ALPPL2	P10696	532 aa		12.01	□□□□□ -0.49
SNHG5-213	ENST00000622963	IRAK1	P51617	712 aa		12.01	□□□□□ -0.49
SNHG5-213	ENST00000622963	UBAP2L	Q14157	1087 aa	Known RBP	12.01	□□□□□ -0.49
SNHG5-213	ENST00000622963	CLCA4	Q14CN2	919 aa		12.01	□□□□□ -0.49
SNHG5-213	ENST00000622963	STK38	Q15208	465 aa		12.01	□□□□□ -0.49
SNHG5-213	ENST00000622963	DEFB133	Q30KQ1	61 aa		12.01	□□□□□ -0.49
SNHG5-213	ENST00000622963	RNF219	Q5W0B1	726 aa	Predicted RBP	12.01	□□□□□ -0.49
SNHG5-213	ENST00000622963	RAP1GAP2	Q684P5	730 aa		12.01	□□□□□ -0.49
SNHG5-213	ENST00000622963	CXorf57	Q6NSI4	855 aa	Known RBP	12.01	□□□□□ -0.49
SNHG5-213	ENST00000622963	PMF1	Q6P1K2	205 aa		12.01	□□□□□ -0.49
SNHG5-213	ENST00000622963	CLEC18B	Q6UXF7	455 aa		12.01	□□□□□ -0.49
SNHG5-213	ENST00000622963	RBM44	Q6ZP01	1051 aa	Known RBP	12.01	□□□□□ -0.49
SNHG5-213	ENST00000622963		Q6ZVU0	165 aa		12.01	□□□□□ -0.49
SNHG5-213	ENST00000622963	UNC45B	Q8IWX7	931 aa		12.01	□□□□□ -0.49
SNHG5-213	ENST00000622963	LGI2	Q8N0V4	545 aa		12.01	□□□□□ -0.49
SNHG5-213	ENST00000622963	SIX6OS1	Q8N1H7	587 aa		12.01	□□□□□ -0.49
SNHG5-213	ENST00000622963	SCML4	Q8N228	414 aa		12.01	□□□□□ -0.49
SNHG5-213	ENST00000622963	ZNF557	Q8N988	423 aa	Predicted RBP	12.01	□□□□□ -0.49
SNHG5-213	ENST00000622963	CLEC18C	Q8NCF0	446 aa		12.01	□□□□□ -0.49
SNHG5-213	ENST00000622963	KCTD13	Q8WZ19	329 aa		12.01	□□□□□ -0.49
SNHG5-213	ENST00000622963	TFAP2B	Q92481	460 aa		12.01	□□□□□ -0.49
SNHG5-213	ENST00000622963	AZIN2	Q96A70	460 aa		12.01	□□□□□ -0.49
SNHG5-213	ENST00000622963	ALG14	Q96F25	216 aa		12.01	□□□□□ -0.49
SNHG5-213	ENST00000622963	CCDC97	Q96F63	343 aa	Predicted RBP	12.01	□□□□□ -0.49
SNHG5-213	ENST00000622963	BMF	Q96LC9	184 aa		12.01	□□□□□ -0.49
SNHG5-213	ENST00000622963	TMEM8A	Q9HCN3	771 aa		12.01	□□□□□ -0.49
SNHG5-213	ENST00000622963	PREB	Q9HCU5	417 aa		12.01	□□□□□ -0.49
SNHG5-213	ENST00000622963	CNGB3	Q9NQW8	809 aa		12.01	□□□□□ -0.49
SNHG5-213	ENST00000622963	PNMA8B	Q9ULN7	279 aa	Predicted RBP	12.01	□□□□□ -0.49
SNHG5-213	ENST00000622963	TEP1	Q99973	2627 aa	Known RBP	12.01	□□□□□ -0.49
SNHG5-213	ENST00000622963	POM121B	A6NF01	834 aa		12	□□□□□ -0.49
SNHG5-213	ENST00000622963	LTF	P02788	710 aa		12	□□□□□ -0.49
SNHG5-213	ENST00000622963	PDIA4	P13667	645 aa	Known RBP	12	□□□□□ -0.49
SNHG5-213	ENST00000622963	HGF	P14210	728 aa		12	□□□□□ -0.49
SNHG5-213	ENST00000622963	CR2	P20023	1033 aa		12	□□□□□ -0.49
SNHG5-213	ENST00000622963	SLC5A2	P31639	672 aa		12	□□□□□ -0.49
SNHG5-213	ENST00000622963	CYP4F2	P78329	520 aa		12	□□□□□ -0.49
SNHG5-213	ENST00000622963	PITX1	P78337	314 aa	Predicted RBP	12	□□□□□ -0.49
SNHG5-213	ENST00000622963	TBR1	Q16650	682 aa		12	□□□□□ -0.49
SNHG5-213	ENST00000622963	SGO2	Q562F6	1265 aa		12	□□□□□ -0.49
SNHG5-213	ENST00000622963	ZCCHC8	Q6NZY4	707 aa	Known RBP	12	□□□□□ -0.49
SNHG5-213	ENST00000622963		Q6ZSR6	202 aa		12	□□□□□ -0.49
SNHG5-213	ENST00000622963	USP53	Q70EK8	1073 aa		12	□□□□□ -0.49
SNHG5-213	ENST00000622963	PTAR1	Q7Z6K3	402 aa	Predicted RBP	12	□□□□□ -0.49
SNHG5-213	ENST00000622963	TAC4	Q86UU9	113 aa		12	□□□□□ -0.49
SNHG5-213	ENST00000622963	VASH2	Q86V25	355 aa		12	□□□□□ -0.49
SNHG5-213	ENST00000622963	HORMAD1	Q86X24	394 aa		12	□□□□□ -0.49
SNHG5-213	ENST00000622963	UBR7	Q8N806	425 aa		12	□□□□□ -0.49
SNHG5-213	ENST00000622963	WDR36	Q8NI36	951 aa	Known RBP	12	□□□□□ -0.49
SNHG5-213	ENST00000622963	OR8D1	Q8WZ84	308 aa		12	□□□□□ -0.49
SNHG5-213	ENST00000622963	SGF29	Q96ES7	293 aa		12	□□□□□ -0.49
SNHG5-213	ENST00000622963	TCEAL2	Q9H3H9	227 aa	Predicted RBP	12	□□□□□ -0.49
SNHG5-213	ENST00000622963	USP29	Q9HBJ7	922 aa		12	□□□□□ -0.49
SNHG5-213	ENST00000622963	FRMD4B	Q9Y2L6	1034 aa		12	□□□□□ -0.49
SNHG5-213	ENST00000622963	UTP20	O75691	2785 aa	Known RBP	11.99	□□□□□ -0.49
SNHG5-213	ENST00000622963	MUSK	O15146	869 aa		11.99	□□□□□ -0.49
SNHG5-213	ENST00000622963	MAPK13	O15264	365 aa		11.99	□□□□□ -0.49
SNHG5-213	ENST00000622963	SPINT1	O43278	529 aa		11.99	□□□□□ -0.49
SNHG5-213	ENST00000622963	ATP9B	O43861	1147 aa		11.99	□□□□□ -0.49
SNHG5-213	ENST00000622963	BNIP3L	O60238	219 aa		11.99	□□□□□ -0.49
SNHG5-213	ENST00000622963	MOCS3	O95396	460 aa		11.99	□□□□□ -0.49
SNHG5-213	ENST00000622963	ITGA2B	P08514	1039 aa		11.99	□□□□□ -0.49
SNHG5-213	ENST00000622963	CD19	P15391	556 aa		11.99	□□□□□ -0.49
SNHG5-213	ENST00000622963	NME1	P15531	152 aa	Known RBP	11.99	□□□□□ -0.49
SNHG5-213	ENST00000622963	TACR2	P21452	398 aa		11.99	□□□□□ -0.49
SNHG5-213	ENST00000622963	HNRNPA2B1	P22626	353 aa	Known RBP	11.99	□□□□□ -0.49
SNHG5-213	ENST00000622963	TMEM259	Q4ZIN3	620 aa		11.99	□□□□□ -0.49
SNHG5-213	ENST00000622963	CHSY1	Q86X52	802 aa		11.99	□□□□□ -0.49
SNHG5-213	ENST00000622963	SLC35F3	Q8IY50	421 aa		11.99	□□□□□ -0.49
SNHG5-213	ENST00000622963	FAM186B	Q8IYM0	893 aa		11.99	□□□□□ -0.49
SNHG5-213	ENST00000622963	RBFA	Q8N0V3	343 aa		11.99	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms