RNA–Protein interactions for RNA: ENST00000622179.4

SIRPA-204, Transcript of signal regulatory protein alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SIRPA, Length 4,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-204ENST00000622179 NPLOC4Q8TAT6 608 aa13.47□□□□□ -0.25
SIRPA-204ENST00000622179 CLPTM1LQ96KA5 538 aa13.47□□□□□ -0.25
SIRPA-204ENST00000622179 TXLNGYQ9BZA5 131 aa13.47□□□□□ -0.25
SIRPA-204ENST00000622179 PRKD2Q9BZL6 878 aa13.47□□□□□ -0.25
SIRPA-204ENST00000622179 CCDC134Q9H6E4 229 aa13.47□□□□□ -0.25
SIRPA-204ENST00000622179 PRDM16Q9HAZ2 1276 aa13.47□□□□□ -0.25
SIRPA-204ENST00000622179 TRMT6Q9UJA5 497 aaKnown RBP13.47□□□□□ -0.25
SIRPA-204ENST00000622179 PLA2G4CQ9UP65 541 aa13.47□□□□□ -0.25
SIRPA-204ENST00000622179 GIT1Q9Y2X7 761 aa13.47□□□□□ -0.25
SIRPA-204ENST00000622179 MFHAS1Q9Y4C4 1052 aa13.47□□□□□ -0.25
SIRPA-204ENST00000622179 SLCO1B7G3V0H7 640 aa13.47□□□□□ -0.25
SIRPA-204ENST00000622179 RHOCP08134 193 aa13.47□□□□□ -0.25
SIRPA-204ENST00000622179 DNAJB2P25686 324 aa13.47□□□□□ -0.25
SIRPA-204ENST00000622179 CRABP2P29373 138 aa13.47□□□□□ -0.25
SIRPA-204ENST00000622179 CDH5P33151 784 aaPredicted RBP13.47□□□□□ -0.25
SIRPA-204ENST00000622179 SERPINH1P50454 418 aaKnown RBP13.47□□□□□ -0.25
SIRPA-204ENST00000622179 POU4F1Q01851 419 aa13.47□□□□□ -0.25
SIRPA-204ENST00000622179 VWA5B1Q5TIE3 1220 aa13.47□□□□□ -0.25
SIRPA-204ENST00000622179 CARNMT1Q8N4J0 409 aa13.47□□□□□ -0.25
SIRPA-204ENST00000622179 FAXDC2Q96IV6 333 aa13.47□□□□□ -0.25
SIRPA-204ENST00000622179 ZNF395Q9H8N7 513 aaPredicted RBP13.47□□□□□ -0.25
SIRPA-204ENST00000622179 TBKBP1A7MCY6 615 aa13.47□□□□□ -0.25
SIRPA-204ENST00000622179 BIRC5O15392 142 aa13.47□□□□□ -0.25
SIRPA-204ENST00000622179 GSC2O15499 205 aa13.47□□□□□ -0.25
SIRPA-204ENST00000622179 CCDC166P0CW27 439 aa13.47□□□□□ -0.25
SIRPA-204ENST00000622179 LPCAT1Q8NF37 534 aa13.47□□□□□ -0.25
SIRPA-204ENST00000622179 CNBD2Q96M20 576 aa13.47□□□□□ -0.25
SIRPA-204ENST00000622179 R3HDMLQ9H3Y0 253 aa13.47□□□□□ -0.25
SIRPA-204ENST00000622179 FKBP6O75344 327 aa13.47□□□□□ -0.25
SIRPA-204ENST00000622179 SNAI1O95863 264 aaPredicted RBP13.47□□□□□ -0.25
SIRPA-204ENST00000622179 CAPRIN1Q14444 709 aaKnown RBP13.47□□□□□ -0.25
SIRPA-204ENST00000622179 LBRQ14739 615 aaKnown RBP13.47□□□□□ -0.25
SIRPA-204ENST00000622179 HFE2Q6ZVN8 426 aa13.47□□□□□ -0.25
SIRPA-204ENST00000622179 ELMOD1Q8N336 334 aa13.47□□□□□ -0.25
SIRPA-204ENST00000622179 TMEM169Q96HH4 297 aa13.47□□□□□ -0.25
SIRPA-204ENST00000622179 ING2Q9H160 280 aa13.47□□□□□ -0.25
SIRPA-204ENST00000622179 XPR1Q9UBH6 696 aa13.47□□□□□ -0.25
SIRPA-204ENST00000622179 FZD10Q9ULW2 581 aa13.47□□□□□ -0.25
SIRPA-204ENST00000622179 SLC12A4Q9UP95 1085 aa13.47□□□□□ -0.25
SIRPA-204ENST00000622179 SLC8A2Q9UPR5 921 aa13.47□□□□□ -0.25
SIRPA-204ENST00000622179 ARL5CA6NH57 179 aa13.46□□□□□ -0.25
SIRPA-204ENST00000622179 NT5C1B-RDH14C9J2C7 533 aa13.46□□□□□ -0.25
SIRPA-204ENST00000622179 MGRN1O60291 552 aa13.46□□□□□ -0.25
SIRPA-204ENST00000622179 MT-CYBP00156 380 aaPredicted RBP13.46□□□□□ -0.25
SIRPA-204ENST00000622179 RAD51Q06609 339 aa13.46□□□□□ -0.25
SIRPA-204ENST00000622179 GALNTL6Q49A17 601 aa13.46□□□□□ -0.25
SIRPA-204ENST00000622179 DRC3Q9H069 523 aa13.46□□□□□ -0.25
SIRPA-204ENST00000622179 WDR55Q9H6Y2 383 aaPredicted RBP13.46□□□□□ -0.25
SIRPA-204ENST00000622179 SCUBE2Q9NQ36 999 aa13.46□□□□□ -0.25
SIRPA-204ENST00000622179 RCOR3Q9P2K3 495 aaPredicted RBP13.46□□□□□ -0.25
SIRPA-204ENST00000622179 KANSL3Q9P2N6 904 aa13.46□□□□□ -0.25
SIRPA-204ENST00000622179 VPS28Q9UK41 221 aa13.46□□□□□ -0.25
SIRPA-204ENST00000622179 LSM7Q9UK45 103 aaKnown RBP13.46□□□□□ -0.25
SIRPA-204ENST00000622179 FAM50BQ9Y247 325 aa13.46□□□□□ -0.25
SIRPA-204ENST00000622179 SNX13Q9Y5W8 968 aa13.46□□□□□ -0.25
SIRPA-204ENST00000622179 NR5A2O00482 541 aa13.46□□□□□ -0.25
SIRPA-204ENST00000622179 SOAT2O75908 522 aa13.46□□□□□ -0.25
SIRPA-204ENST00000622179 RPLP2P05387 115 aaKnown RBP13.46□□□□□ -0.25
SIRPA-204ENST00000622179 MBL2P11226 248 aaPredicted RBP13.46□□□□□ -0.25
SIRPA-204ENST00000622179 SH3BGRP55822 239 aaPredicted RBP13.46□□□□□ -0.25
SIRPA-204ENST00000622179 BTKQ06187 659 aa13.46□□□□□ -0.25
SIRPA-204ENST00000622179 OLIG2Q13516 323 aa13.46□□□□□ -0.25
SIRPA-204ENST00000622179 RIPOR1Q6ZS17 1223 aa13.46□□□□□ -0.25
SIRPA-204ENST00000622179 CATSPER1Q8NEC5 780 aa13.46□□□□□ -0.25
SIRPA-204ENST00000622179 CEP70Q8NHQ1 597 aa13.46□□□□□ -0.25
SIRPA-204ENST00000622179 DQX1Q8TE96 717 aaKnown RBP13.46□□□□□ -0.25
SIRPA-204ENST00000622179 AGAP2Q99490 1192 aa13.46□□□□□ -0.25
SIRPA-204ENST00000622179 EPB41L4BQ9H329 900 aa13.46□□□□□ -0.25
SIRPA-204ENST00000622179 ALG9Q9H6U8 611 aa13.46□□□□□ -0.25
SIRPA-204ENST00000622179 ATP13A1Q9HD20 1204 aa13.46□□□□□ -0.25
SIRPA-204ENST00000622179 PIGVQ9NUD9 493 aa13.46□□□□□ -0.25
SIRPA-204ENST00000622179 TRPM5Q9NZQ8 1165 aa13.46□□□□□ -0.25
SIRPA-204ENST00000622179 HBS1LQ9Y450 684 aaKnown RBP13.46□□□□□ -0.25
SIRPA-204ENST00000622179 MAGEA13PA6NCF6 341 aa13.46□□□□□ -0.26
SIRPA-204ENST00000622179 FGF10O15520 208 aaPredicted RBP13.46□□□□□ -0.26
SIRPA-204ENST00000622179 MLNP12872 115 aa13.46□□□□□ -0.26
SIRPA-204ENST00000622179 HNRNPLP14866 589 aaKnown RBP eCLIP13.46□□□□□ -0.262e-6■■□□□ 13.8
SIRPA-204ENST00000622179 ZNF135P52742 658 aaPredicted RBP13.46□□□□□ -0.26
SIRPA-204ENST00000622179 DAOAP59103 153 aa13.46□□□□□ -0.26
SIRPA-204ENST00000622179 CCDC15Q0P6D6 951 aa13.46□□□□□ -0.26
SIRPA-204ENST00000622179 PQLC3Q8N755 202 aa13.46□□□□□ -0.26
SIRPA-204ENST00000622179 C16orf70Q9BSU1 422 aa13.46□□□□□ -0.26
SIRPA-204ENST00000622179 NFKBIZQ9BYH8 718 aa13.46□□□□□ -0.26
SIRPA-204ENST00000622179 DENND2DQ9H6A0 471 aaPredicted RBP13.46□□□□□ -0.26
SIRPA-204ENST00000622179 FBXO5Q9UKT4 447 aa13.46□□□□□ -0.26
SIRPA-204ENST00000622179 KCNK10P57789 538 aa13.46□□□□□ -0.26
SIRPA-204ENST00000622179 WASHC5Q12768 1159 aa13.46□□□□□ -0.26
SIRPA-204ENST00000622179 DLG2Q15700 870 aa13.46□□□□□ -0.26
SIRPA-204ENST00000622179 ZNF792Q3KQV3 632 aa13.46□□□□□ -0.26
SIRPA-204ENST00000622179 CLEC20AQ6ZU45 233 aa13.46□□□□□ -0.26
SIRPA-204ENST00000622179 ATAD1Q8NBU5 361 aa13.46□□□□□ -0.26
SIRPA-204ENST00000622179 SCAMP5Q8TAC9 235 aa13.46□□□□□ -0.26
SIRPA-204ENST00000622179 ZNF333Q96JL9 665 aa13.46□□□□□ -0.26
SIRPA-204ENST00000622179 EXOC2Q96KP1 924 aa13.46□□□□□ -0.26
SIRPA-204ENST00000622179 ZNF358Q9NW07 568 aa13.46□□□□□ -0.26
SIRPA-204ENST00000622179 TMEM216Q9P0N5 145 aa13.46□□□□□ -0.26
SIRPA-204ENST00000622179 ZNF180Q9UJW8 692 aa13.46□□□□□ -0.26
SIRPA-204ENST00000622179 ORC6Q9Y5N6 252 aa13.46□□□□□ -0.26
SIRPA-204ENST00000622179 LTBP4Q8N2S1 1624 aa13.45□□□□□ -0.26
SIRPA-204ENST00000622179 XIRP1Q702N8 1843 aaKnown RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms