RNA–Protein interactions for RNA: ENST00000617246.4

LPP-220, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPP, Length 18,220 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-220ENST00000617246 UBA2Q9UBT2 640 aaPredicted RBP3.41□□□□□ -1.86
LPP-220ENST00000617246 PRRG2O14669 202 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 EIF4EP06730 217 aaKnown RBP3.41□□□□□ -1.86
LPP-220ENST00000617246 KLRC1P26715 233 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 SNW1Q13573 536 aaKnown RBP3.41□□□□□ -1.86
LPP-220ENST00000617246 ELOA2Q8IYF1 753 aaPredicted RBP3.41□□□□□ -1.86
LPP-220ENST00000617246 RP9Q8TA86 221 aaKnown RBP3.41□□□□□ -1.86
LPP-220ENST00000617246 CASKIN2Q8WXE0 1202 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 NCLNQ969V3 563 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 TJP3O95049 919 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 TIE1P35590 1138 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 CARSP49589 748 aaKnown RBP3.41□□□□□ -1.86
LPP-220ENST00000617246 IRX5P78411 483 aaPredicted RBP3.41□□□□□ -1.86
LPP-220ENST00000617246 TNK2Q07912 1038 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 EIF3IQ13347 325 aaKnown RBP3.41□□□□□ -1.86
LPP-220ENST00000617246 WDR72Q3MJ13 1102 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 TMEM211Q6ICI0 200 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 CPEB3Q8NE35 698 aaKnown RBP3.41□□□□□ -1.86
LPP-220ENST00000617246 CFAP61Q8NHU2 1237 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 JADE3Q92613 823 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 SELENOSQ9BQE4 189 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 SLC30A2Q9BRI3 323 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 POLR1EQ9GZS1 481 aaKnown RBP3.41□□□□□ -1.86
LPP-220ENST00000617246 MRPL40Q9NQ50 206 aaKnown RBP3.41□□□□□ -1.86
LPP-220ENST00000617246 WWOXQ9NZC7 414 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 CDC40O60508 579 aaKnown RBP eCLIP3.41□□□□□ -1.86
LPP-220ENST00000617246 TNFSF4P23510 183 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 RIDAP52758 137 aaKnown RBP3.41□□□□□ -1.86
LPP-220ENST00000617246 SRP54P61011 504 aaKnown RBP3.41□□□□□ -1.86
LPP-220ENST00000617246 MZT1Q08AG7 82 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 STX5Q13190 355 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 HIC1Q14526 733 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 DOK6Q6PKX4 331 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 CYP4Z1Q86W10 505 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 ZNF563Q8TA94 476 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 LRRC8CQ8TDW0 803 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 ESYT1Q9BSJ8 1104 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 DERAQ9Y315 318 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 NFASCO94856 1347 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 TFECO14948 347 aaPredicted RBP3.41□□□□□ -1.86
LPP-220ENST00000617246 FGF18O76093 207 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 MZF1P28698 734 aaPredicted RBP3.41□□□□□ -1.86
LPP-220ENST00000617246 YWHAGP61981 247 aaKnown RBP eCLIP3.41□□□□□ -1.86
LPP-220ENST00000617246 KLHL23Q8NBE8 558 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 MIPOL1Q8TD10 442 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 MTMR8Q96EF0 704 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 SCLYQ96I15 445 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 PHF12Q96QT6 1004 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 FAM213AQ9BRX8 229 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 MBD1Q9UIS9 605 aaPredicted RBP3.41□□□□□ -1.86
LPP-220ENST00000617246 SHISA7A6NL88 538 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 EIF3BP55884 814 aaKnown RBP3.41□□□□□ -1.86
LPP-220ENST00000617246 TPGS1Q6ZTW0 290 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 CYP4X1Q8N118 509 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 RIN3Q8TB24 985 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 P2RX5Q93086 422 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 CASD1Q96PB1 797 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 HES7Q9BYE0 225 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 PUS7LQ9H0K6 701 aaKnown RBP3.41□□□□□ -1.86
LPP-220ENST00000617246 EPHX3Q9H6B9 360 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 MTMR6Q9Y217 621 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 NUP210Q8TEM1 1887 aaPredicted RBP3.41□□□□□ -1.86
LPP-220ENST00000617246 EXTL3O43909 919 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 HOXA10P31260 410 aaPredicted RBP3.41□□□□□ -1.86
LPP-220ENST00000617246 DCAF12Q5T6F0 453 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 TTI2Q6NXR4 508 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 WDR75Q8IWA0 830 aaKnown RBP3.41□□□□□ -1.86
LPP-220ENST00000617246 TNIP2Q8NFZ5 429 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 UBE2FQ969M7 185 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 TMEM47Q9BQJ4 181 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 TRMT6Q9UJA5 497 aaKnown RBP3.41□□□□□ -1.86
LPP-220ENST00000617246 RARRES3Q9UL19 164 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 A0A1B0GTW7 788 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 TM9SF1O15321 606 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 RHDQ02161 417 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 GLRA4Q5JXX5 417 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 MTERF4Q7Z6M4 381 aaKnown RBP3.41□□□□□ -1.86
LPP-220ENST00000617246 PLIN2Q99541 437 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 TDP1Q9NUW8 608 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 MTMR4Q9NYA4 1195 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 RSPH14Q9UHP6 348 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 EYA4O95677 639 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 TROVE2P10155 538 aaKnown RBP eCLIP3.41□□□□□ -1.86
LPP-220ENST00000617246 CTSOP43234 321 aaPredicted RBP3.41□□□□□ -1.86
LPP-220ENST00000617246 GLRBP48167 497 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 CLCN3P51790 818 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 MBLAC2Q68D91 279 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 IRGCQ6NXR0 463 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 ANO5Q75V66 913 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 HPS6Q86YV9 775 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 AGGF1Q8N302 714 aaeCLIP3.41□□□□□ -1.868e-7■■■□□ 17.4
LPP-220ENST00000617246 AGPAT1Q99943 283 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 XAB2Q9HCS7 855 aaKnown RBP3.41□□□□□ -1.86
LPP-220ENST00000617246 PCDH12Q9NPG4 1184 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 RRAGDQ9NQL2 400 aaPredicted RBP3.41□□□□□ -1.86
LPP-220ENST00000617246 EURLQ9NYK6 297 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 UVRAGQ9P2Y5 699 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 ZC3H7BQ9UGR2 993 aaKnown RBP3.41□□□□□ -1.86
LPP-220ENST00000617246 FBXO4Q9UKT5 387 aa3.41□□□□□ -1.86
LPP-220ENST00000617246 ZNF214Q9UL59 606 aaPredicted RBP3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms