RNA–Protein interactions for RNA: ENST00000617222.4

PCDHGC3-204, Transcript of protocadherin gamma subfamily C, 3, humanhuman

TSL 3 BASIC

Gene PCDHGC3, Length 731 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-204ENST00000617222 RPLP0P6Q8NHW5 317 aa15.94■□□□□ 0.14
PCDHGC3-204ENST00000617222 OLFM3Q96PB7 478 aa15.94■□□□□ 0.14
PCDHGC3-204ENST00000617222 LGMNQ99538 433 aa15.94■□□□□ 0.14
PCDHGC3-204ENST00000617222 FAM118BQ9BPY3 351 aa15.94■□□□□ 0.14
PCDHGC3-204ENST00000617222 CACNA2D2Q9NY47 1150 aa15.94■□□□□ 0.14
PCDHGC3-204ENST00000617222 ZSCAN5CA6NGD5 496 aaPredicted RBP15.93■□□□□ 0.14
PCDHGC3-204ENST00000617222 WASH3PC4AMC7 463 aa15.93■□□□□ 0.14
PCDHGC3-204ENST00000617222 K7ERQ8 282 aa15.93■□□□□ 0.14
PCDHGC3-204ENST00000617222 SMAD6O43541 496 aaKnown RBP15.93■□□□□ 0.14
PCDHGC3-204ENST00000617222 PI15O43692 258 aa15.93■□□□□ 0.14
PCDHGC3-204ENST00000617222 CD160O95971 181 aa15.93■□□□□ 0.14
PCDHGC3-204ENST00000617222 TUBB4AP04350 444 aa15.93■□□□□ 0.14
PCDHGC3-204ENST00000617222 DCNP07585 359 aaKnown RBP15.93■□□□□ 0.14
PCDHGC3-204ENST00000617222 IL12RB1P42701 662 aa15.93■□□□□ 0.14
PCDHGC3-204ENST00000617222 NOMO1Q15155 1222 aa15.93■□□□□ 0.14
PCDHGC3-204ENST00000617222 E2F5Q15329 346 aa15.93■□□□□ 0.14
PCDHGC3-204ENST00000617222 ACCSLQ4AC99 568 aa15.93■□□□□ 0.14
PCDHGC3-204ENST00000617222 CWF19L1Q69YN2 538 aaKnown RBP15.93■□□□□ 0.14
PCDHGC3-204ENST00000617222 ZC3H18Q86VM9 953 aaKnown RBP15.93■□□□□ 0.14
PCDHGC3-204ENST00000617222 CHPFQ8IZ52 775 aa15.93■□□□□ 0.14
PCDHGC3-204ENST00000617222 IL17RCQ8NAC3 791 aa15.93■□□□□ 0.14
PCDHGC3-204ENST00000617222 TTC13Q8NBP0 860 aa15.93■□□□□ 0.14
PCDHGC3-204ENST00000617222 TXNDC5Q8NBS9 432 aaKnown RBP15.93■□□□□ 0.14
PCDHGC3-204ENST00000617222 ZNF592Q92610 1267 aa15.93■□□□□ 0.14
PCDHGC3-204ENST00000617222 PBXIP1Q96AQ6 731 aa15.93■□□□□ 0.14
PCDHGC3-204ENST00000617222 CLDN23Q96B33 292 aa15.93■□□□□ 0.14
PCDHGC3-204ENST00000617222 MYO19Q96H55 970 aa15.93■□□□□ 0.14
PCDHGC3-204ENST00000617222 TSGA13Q96PP4 275 aa15.93■□□□□ 0.14
PCDHGC3-204ENST00000617222 PDFQ9HBH1 243 aa15.93■□□□□ 0.14
PCDHGC3-204ENST00000617222 SMARCAL1Q9NZC9 954 aa15.93■□□□□ 0.14
PCDHGC3-204ENST00000617222 UBA2Q9UBT2 640 aaPredicted RBP15.93■□□□□ 0.14
PCDHGC3-204ENST00000617222 HS3ST2Q9Y278 367 aa15.93■□□□□ 0.14
PCDHGC3-204ENST00000617222 R3HDM2Q9Y2K5 976 aaKnown RBP15.93■□□□□ 0.14
PCDHGC3-204ENST00000617222 STON1Q9Y6Q2 735 aa15.93■□□□□ 0.14
PCDHGC3-204ENST00000617222 NUP205Q92621 2012 aa15.92■□□□□ 0.14
PCDHGC3-204ENST00000617222 TECTAO75443 2155 aa15.92■□□□□ 0.14
PCDHGC3-204ENST00000617222 TTC34A8MYJ7 566 aa15.92■□□□□ 0.14
PCDHGC3-204ENST00000617222 H7C0C1 242 aa15.92■□□□□ 0.14
PCDHGC3-204ENST00000617222 KIF2AO00139 706 aaPredicted RBP15.92■□□□□ 0.14
PCDHGC3-204ENST00000617222 CES2O00748 559 aa15.92■□□□□ 0.14
PCDHGC3-204ENST00000617222 PPP1R12AO14974 1030 aaPredicted RBP15.92■□□□□ 0.14
PCDHGC3-204ENST00000617222 NPC1O15118 1278 aa15.92■□□□□ 0.14
PCDHGC3-204ENST00000617222 SRCP12931 536 aa15.92■□□□□ 0.14
PCDHGC3-204ENST00000617222 HLA-EP13747 358 aa15.92■□□□□ 0.14
PCDHGC3-204ENST00000617222 CCNCP24863 283 aa15.92■□□□□ 0.14
PCDHGC3-204ENST00000617222 NTSR1P30989 418 aa15.92■□□□□ 0.14
PCDHGC3-204ENST00000617222 ATP5OP48047 213 aa15.92■□□□□ 0.14
PCDHGC3-204ENST00000617222 SERPINH1P50454 418 aaKnown RBP15.92■□□□□ 0.14
PCDHGC3-204ENST00000617222 GEMIN4P57678 1058 aaKnown RBP15.92■□□□□ 0.14
PCDHGC3-204ENST00000617222 EIF3EP60228 445 aaKnown RBP15.92■□□□□ 0.14
PCDHGC3-204ENST00000617222 PPIDQ08752 370 aaKnown RBP15.92■□□□□ 0.14
PCDHGC3-204ENST00000617222 AP1B1Q10567 949 aa15.92■□□□□ 0.14
PCDHGC3-204ENST00000617222 CYTH1Q15438 398 aa15.92■□□□□ 0.14
PCDHGC3-204ENST00000617222 DLG2Q15700 870 aa15.92■□□□□ 0.14
PCDHGC3-204ENST00000617222 SDE2Q6IQ49 451 aa15.92■□□□□ 0.14
PCDHGC3-204ENST00000617222 PKN3Q6P5Z2 889 aa15.92■□□□□ 0.14
PCDHGC3-204ENST00000617222 SERPINA13PQ6UXR4 307 aa15.92■□□□□ 0.14
PCDHGC3-204ENST00000617222 CCDC13Q8IYE1 715 aa15.92■□□□□ 0.14
PCDHGC3-204ENST00000617222 SH2D3CQ8N5H7 860 aa15.92■□□□□ 0.14
PCDHGC3-204ENST00000617222 ZNF366Q8N895 744 aa15.92■□□□□ 0.14
PCDHGC3-204ENST00000617222 KDM1BQ8NB78 822 aa15.92■□□□□ 0.14
PCDHGC3-204ENST00000617222 TFB1MQ8WVM0 346 aaKnown RBP15.92■□□□□ 0.14
PCDHGC3-204ENST00000617222 MAIP1Q8WWC4 291 aa15.92■□□□□ 0.14
PCDHGC3-204ENST00000617222 C1orf54Q8WWF1 131 aa15.92■□□□□ 0.14
PCDHGC3-204ENST00000617222 HDAC11Q96DB2 347 aa15.92■□□□□ 0.14
PCDHGC3-204ENST00000617222 CAPZA3Q96KX2 299 aa15.92■□□□□ 0.14
PCDHGC3-204ENST00000617222 BRD8Q9H0E9 1235 aa15.92■□□□□ 0.14
PCDHGC3-204ENST00000617222 MTG2Q9H4K7 406 aa15.92■□□□□ 0.14
PCDHGC3-204ENST00000617222 C10orf88Q9H8K7 445 aa15.92■□□□□ 0.14
PCDHGC3-204ENST00000617222 TTC7AQ9ULT0 858 aaPredicted RBP15.92■□□□□ 0.14
PCDHGC3-204ENST00000617222 FCF1Q9Y324 198 aaKnown RBP15.92■□□□□ 0.14
PCDHGC3-204ENST00000617222 CXorf51AA0A1B0GTR3 108 aa15.91■□□□□ 0.14
PCDHGC3-204ENST00000617222 SGK1O00141 431 aa15.91■□□□□ 0.14
PCDHGC3-204ENST00000617222 MCF2LO15068 1137 aa15.91■□□□□ 0.14
PCDHGC3-204ENST00000617222 MATN3O15232 486 aa15.91■□□□□ 0.14
PCDHGC3-204ENST00000617222 ATP9BO43861 1147 aa15.91■□□□□ 0.14
PCDHGC3-204ENST00000617222 ADAM23O75077 832 aa15.91■□□□□ 0.14
PCDHGC3-204ENST00000617222 PEX11BO96011 259 aa15.91■□□□□ 0.14
PCDHGC3-204ENST00000617222 PRKCHP24723 683 aa15.91■□□□□ 0.14
PCDHGC3-204ENST00000617222 VASPP50552 380 aaPredicted RBP15.91■□□□□ 0.14
PCDHGC3-204ENST00000617222 CLCN6P51797 869 aa15.91■□□□□ 0.14
PCDHGC3-204ENST00000617222 XRCC4Q13426 336 aa15.91■□□□□ 0.14
PCDHGC3-204ENST00000617222 GAS6Q14393 721 aa15.91■□□□□ 0.14
PCDHGC3-204ENST00000617222 SIX1Q15475 284 aaPredicted RBP15.91■□□□□ 0.14
PCDHGC3-204ENST00000617222 INO80DQ53TQ3 878 aaPredicted RBP15.91■□□□□ 0.14
PCDHGC3-204ENST00000617222 TIGD7Q6NT04 549 aaPredicted RBP15.91■□□□□ 0.14
PCDHGC3-204ENST00000617222 DARS2Q6PI48 645 aaKnown RBP15.91■□□□□ 0.14
PCDHGC3-204ENST00000617222 TRMT11Q7Z4G4 463 aaKnown RBP15.91■□□□□ 0.14
PCDHGC3-204ENST00000617222 ACTRT1Q8TDG2 376 aa15.91■□□□□ 0.14
PCDHGC3-204ENST00000617222 NSMCE1Q8WV22 266 aa15.91■□□□□ 0.14
PCDHGC3-204ENST00000617222 ATG4AQ8WYN0 398 aa15.91■□□□□ 0.14
PCDHGC3-204ENST00000617222 ERLEC1Q96DZ1 483 aa15.91■□□□□ 0.14
PCDHGC3-204ENST00000617222 ZNF599Q96NL3 588 aa15.91■□□□□ 0.14
PCDHGC3-204ENST00000617222 TMEM245Q9H330 911 aa15.91■□□□□ 0.14
PCDHGC3-204ENST00000617222 POLR3BQ9NW08 1133 aaPredicted RBP15.91■□□□□ 0.14
PCDHGC3-204ENST00000617222 SUN2Q9UH99 717 aa15.91■□□□□ 0.14
PCDHGC3-204ENST00000617222 SLC8A2Q9UPR5 921 aa15.91■□□□□ 0.14
PCDHGC3-204ENST00000617222 MIA3Q5JRA6 1907 aa15.91■□□□□ 0.14
PCDHGC3-204ENST00000617222 KIAA1549LQ6ZVL6 1849 aa15.91■□□□□ 0.14
PCDHGC3-204ENST00000617222 HACD1B0YJ81 288 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms