RNA–Protein interactions for RNA: ENST00000616395.4

TRAPPC3-209, Transcript of trafficking protein particle complex 3, humanhuman

TSL 3 BASIC

Gene TRAPPC3, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-209ENST00000616395 EIF3CLB5ME19 914 aaKnown RBP18.13■□□□□ 0.49
TRAPPC3-209ENST00000616395 MYF5P13349 255 aa18.13■□□□□ 0.49
TRAPPC3-209ENST00000616395 TNNT1P13805 278 aa18.13■□□□□ 0.49
TRAPPC3-209ENST00000616395 GOT1P17174 413 aa18.13■□□□□ 0.49
TRAPPC3-209ENST00000616395 PSMD8P48556 350 aa18.13■□□□□ 0.49
TRAPPC3-209ENST00000616395 SKOR1P84550 965 aa18.13■□□□□ 0.49
TRAPPC3-209ENST00000616395 INCA1Q0VD86 236 aa18.13■□□□□ 0.49
TRAPPC3-209ENST00000616395 C3orf38Q5JPI3 329 aa18.13■□□□□ 0.49
TRAPPC3-209ENST00000616395 ADGRF1Q5T601 910 aa18.13■□□□□ 0.49
TRAPPC3-209ENST00000616395 SMYD5Q6GMV2 418 aa18.13■□□□□ 0.49
TRAPPC3-209ENST00000616395 SND1Q7KZF4 910 aaKnown RBP eCLIP18.13■□□□□ 0.49
TRAPPC3-209ENST00000616395 OR4C6Q8NH72 309 aa18.13■□□□□ 0.49
TRAPPC3-209ENST00000616395 PPP1R13BQ96KQ4 1090 aa18.13■□□□□ 0.49
TRAPPC3-209ENST00000616395 MRGPRX3Q96LB0 322 aa18.13■□□□□ 0.49
TRAPPC3-209ENST00000616395 NT5C1BQ96P26 610 aa18.13■□□□□ 0.49
TRAPPC3-209ENST00000616395 EIF3CQ99613 913 aaKnown RBP18.13■□□□□ 0.49
TRAPPC3-209ENST00000616395 NT5C1AQ9BXI3 368 aa18.13■□□□□ 0.49
TRAPPC3-209ENST00000616395 STK33Q9BYT3 514 aa18.13■□□□□ 0.49
TRAPPC3-209ENST00000616395 OSBPL2Q9H1P3 480 aa18.13■□□□□ 0.49
TRAPPC3-209ENST00000616395 UCKL1Q9NWZ5 548 aa18.13■□□□□ 0.49
TRAPPC3-209ENST00000616395 TPX2Q9ULW0 747 aaKnown RBP18.13■□□□□ 0.49
TRAPPC3-209ENST00000616395 SATB2Q9UPW6 733 aa18.13■□□□□ 0.49
TRAPPC3-209ENST00000616395 PAXBP1Q9Y5B6 917 aa18.13■□□□□ 0.49
TRAPPC3-209ENST00000616395 TBC1D3DA0A087WVF3 549 aa18.12■□□□□ 0.49
TRAPPC3-209ENST00000616395 TBC1D3IA0A087WXS9 549 aa18.12■□□□□ 0.49
TRAPPC3-209ENST00000616395 TBC1D3EA0A087X179 549 aa18.12■□□□□ 0.49
TRAPPC3-209ENST00000616395 TBC1D3KA0A087X1G2 549 aa18.12■□□□□ 0.49
TRAPPC3-209ENST00000616395 A0A1W2PNU3 283 aaPredicted RBP18.12■□□□□ 0.49
TRAPPC3-209ENST00000616395 TBC1D3FA6NER0 549 aaPredicted RBP18.12■□□□□ 0.49
TRAPPC3-209ENST00000616395 TBC1D3LB9A6J9 549 aa18.12■□□□□ 0.49
TRAPPC3-209ENST00000616395 FFAR2O15552 330 aa18.12■□□□□ 0.49
TRAPPC3-209ENST00000616395 KIF5CO60282 957 aa18.12■□□□□ 0.49
TRAPPC3-209ENST00000616395 TBC1D3HP0C7X1 549 aa18.12■□□□□ 0.49
TRAPPC3-209ENST00000616395 CKMT1AP12532 417 aa18.12■□□□□ 0.49
TRAPPC3-209ENST00000616395 DGKAP23743 735 aa18.12■□□□□ 0.49
TRAPPC3-209ENST00000616395 RBMS1P29558 406 aaKnown RBP18.12■□□□□ 0.49
TRAPPC3-209ENST00000616395 ZNF394Q53GI3 561 aa18.12■□□□□ 0.49
TRAPPC3-209ENST00000616395 PPP1R26Q5T8A7 1209 aaPredicted RBP18.12■□□□□ 0.49
TRAPPC3-209ENST00000616395 TBC1D3GQ6DHY5 549 aa18.12■□□□□ 0.49
TRAPPC3-209ENST00000616395 TBC1D3CQ6IPX1 549 aa18.12■□□□□ 0.49
TRAPPC3-209ENST00000616395 IGF2-ASQ6U949 168 aa18.12■□□□□ 0.49
TRAPPC3-209ENST00000616395 ATG14Q6ZNE5 492 aa18.12■□□□□ 0.49
TRAPPC3-209ENST00000616395 IQCHQ86VS3 1027 aa18.12■□□□□ 0.49
TRAPPC3-209ENST00000616395 TBC1D3Q8IZP1 549 aaPredicted RBP18.12■□□□□ 0.49
TRAPPC3-209ENST00000616395 TTC17Q96AE7 1141 aa18.12■□□□□ 0.49
TRAPPC3-209ENST00000616395 C16orf45Q96MC5 204 aaPredicted RBP18.12■□□□□ 0.49
TRAPPC3-209ENST00000616395 ARHGAP20Q9P2F6 1191 aa18.12■□□□□ 0.49
TRAPPC3-209ENST00000616395 DNAJC12Q9UKB3 198 aa18.12■□□□□ 0.49
TRAPPC3-209ENST00000616395 ADGRG1Q9Y653 693 aa18.12■□□□□ 0.49
TRAPPC3-209ENST00000616395 TEX15Q9BXT5 2789 aa18.11■□□□□ 0.49
TRAPPC3-209ENST00000616395 KRT86O43790 486 aa18.11■□□□□ 0.49
TRAPPC3-209ENST00000616395 MAGEC1O60732 1142 aa18.11■□□□□ 0.49
TRAPPC3-209ENST00000616395 TBL1XO60907 577 aa18.11■□□□□ 0.49
TRAPPC3-209ENST00000616395 GFPT2O94808 682 aa18.11■□□□□ 0.49
TRAPPC3-209ENST00000616395 MAT2AP31153 395 aaKnown RBP18.11■□□□□ 0.49
TRAPPC3-209ENST00000616395 CSKP41240 450 aa18.11■□□□□ 0.49
TRAPPC3-209ENST00000616395 OVGP1Q12889 678 aa18.11■□□□□ 0.49
TRAPPC3-209ENST00000616395 MAPK8IP2Q13387 824 aaPredicted RBP18.11■□□□□ 0.49
TRAPPC3-209ENST00000616395 ZNF574Q6ZN55 896 aaPredicted RBP18.11■□□□□ 0.49
TRAPPC3-209ENST00000616395 PRPF39Q86UA1 669 aaKnown RBP18.11■□□□□ 0.49
TRAPPC3-209ENST00000616395 KIF18AQ8NI77 898 aa18.11■□□□□ 0.49
TRAPPC3-209ENST00000616395 NDRG1Q92597 394 aaKnown RBP18.11■□□□□ 0.49
TRAPPC3-209ENST00000616395 CCDC97Q96F63 343 aaPredicted RBP18.11■□□□□ 0.49
TRAPPC3-209ENST00000616395 LMLNQ96KR4 655 aa18.11■□□□□ 0.49
TRAPPC3-209ENST00000616395 SLC46A1Q96NT5 459 aa18.11■□□□□ 0.49
TRAPPC3-209ENST00000616395 FAM129BQ96TA1 746 aa18.11■□□□□ 0.49
TRAPPC3-209ENST00000616395 ABCG4Q9H172 646 aa18.11■□□□□ 0.49
TRAPPC3-209ENST00000616395 HAUS4Q9H6D7 363 aa18.11■□□□□ 0.49
TRAPPC3-209ENST00000616395 ANKMY1Q9P2S6 941 aa18.11■□□□□ 0.49
TRAPPC3-209ENST00000616395 SFMBT1Q9UHJ3 866 aa18.11■□□□□ 0.49
TRAPPC3-209ENST00000616395 COQ4Q9Y3A0 265 aa18.11■□□□□ 0.49
TRAPPC3-209ENST00000616395 TTC34A8MYJ7 566 aa18.1■□□□□ 0.49
TRAPPC3-209ENST00000616395 GIMD1P0DJR0 217 aa18.1■□□□□ 0.49
TRAPPC3-209ENST00000616395 C5AR1P21730 350 aa18.1■□□□□ 0.49
TRAPPC3-209ENST00000616395 STAT4Q14765 748 aa18.1■□□□□ 0.49
TRAPPC3-209ENST00000616395 ISXQ2M1V0 245 aa18.1■□□□□ 0.49
TRAPPC3-209ENST00000616395 LINC00303Q3SY05 128 aa18.1■□□□□ 0.49
TRAPPC3-209ENST00000616395 RFWD3Q6PCD5 774 aa18.1■□□□□ 0.49
TRAPPC3-209ENST00000616395 RAD9BQ6WBX8 426 aa18.1■□□□□ 0.49
TRAPPC3-209ENST00000616395 C17orf53Q8N3J3 647 aaPredicted RBP18.1■□□□□ 0.49
TRAPPC3-209ENST00000616395 CAAP1Q9H8G2 361 aa18.1■□□□□ 0.49
TRAPPC3-209ENST00000616395 CYP3A43Q9HB55 503 aa18.1■□□□□ 0.49
TRAPPC3-209ENST00000616395 MYO1AQ9UBC5 1043 aa18.1■□□□□ 0.49
TRAPPC3-209ENST00000616395 CYTH4Q9UIA0 394 aa18.1■□□□□ 0.49
TRAPPC3-209ENST00000616395 INTS6Q9UL03 887 aaKnown RBP18.1■□□□□ 0.49
TRAPPC3-209ENST00000616395 CA5BQ9Y2D0 317 aa18.1■□□□□ 0.49
TRAPPC3-209ENST00000616395 HBS1LQ9Y450 684 aaKnown RBP18.1■□□□□ 0.49
TRAPPC3-209ENST00000616395 GOLGA6L7A0A1B0GV03 622 aa18.09■□□□□ 0.49
TRAPPC3-209ENST00000616395 TARSL2A2RTX5 802 aaKnown RBP18.09■□□□□ 0.49
TRAPPC3-209ENST00000616395 RNF225M0QZC1 329 aaPredicted RBP18.09■□□□□ 0.49
TRAPPC3-209ENST00000616395 EPHB6O15197 1021 aa18.09■□□□□ 0.49
TRAPPC3-209ENST00000616395 LATS1O95835 1130 aa18.09■□□□□ 0.49
TRAPPC3-209ENST00000616395 ASLP04424 464 aa18.09■□□□□ 0.49
TRAPPC3-209ENST00000616395 SOX5P35711 763 aa18.09■□□□□ 0.49
TRAPPC3-209ENST00000616395 KIF5AQ12840 1032 aa18.09■□□□□ 0.49
TRAPPC3-209ENST00000616395 CLN3Q13286 438 aa18.09■□□□□ 0.49
TRAPPC3-209ENST00000616395 ARL13BQ3SXY8 428 aa18.09■□□□□ 0.49
TRAPPC3-209ENST00000616395 SGO2Q562F6 1265 aa18.09■□□□□ 0.49
TRAPPC3-209ENST00000616395 RAB41Q5JT25 222 aa18.09■□□□□ 0.49
TRAPPC3-209ENST00000616395 MPP7Q5T2T1 576 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms