RNA–Protein interactions for RNA: ENST00000615061.4

CBWD3-211, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,771 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-211ENST00000615061 LYSMD4Q5XG99 296 aa17.1■□□□□ 0.33
CBWD3-211ENST00000615061 CYP2U1Q7Z449 544 aa17.1■□□□□ 0.33
CBWD3-211ENST00000615061 HSPH1Q92598 858 aa17.1■□□□□ 0.33
CBWD3-211ENST00000615061 HSPA12BQ96MM6 686 aa17.1■□□□□ 0.33
CBWD3-211ENST00000615061 KLC2Q9H0B6 622 aa17.1■□□□□ 0.33
CBWD3-211ENST00000615061 MAGEH1Q9H213 219 aa17.1■□□□□ 0.33
CBWD3-211ENST00000615061 TNKS2Q9H2K2 1166 aa17.1■□□□□ 0.33
CBWD3-211ENST00000615061 RXFP3Q9NSD7 469 aa17.1■□□□□ 0.33
CBWD3-211ENST00000615061 SARDHQ9UL12 918 aa17.1■□□□□ 0.33
CBWD3-211ENST00000615061 FCF1Q9Y324 198 aaKnown RBP17.1■□□□□ 0.33
CBWD3-211ENST00000615061 PCDHGA5Q9Y5G8 931 aa17.1■□□□□ 0.33
CBWD3-211ENST00000615061 ADAMTS9Q9P2N4 1935 aa17.09■□□□□ 0.33
CBWD3-211ENST00000615061 WASH4PA8MWX3 477 aa17.09■□□□□ 0.33
CBWD3-211ENST00000615061 PATE3B3GLJ2 98 aa17.09■□□□□ 0.33
CBWD3-211ENST00000615061 RNASEH1O60930 286 aaKnown RBP17.09■□□□□ 0.33
CBWD3-211ENST00000615061 ZNF821O75541 412 aaPredicted RBP17.09■□□□□ 0.33
CBWD3-211ENST00000615061 IL1BP01584 269 aa17.09■□□□□ 0.33
CBWD3-211ENST00000615061 TMEM253P0C7T8 217 aa17.09■□□□□ 0.33
CBWD3-211ENST00000615061 RARAP10276 462 aa17.09■□□□□ 0.33
CBWD3-211ENST00000615061 ZBTB16Q05516 673 aa17.09■□□□□ 0.33
CBWD3-211ENST00000615061 POM121L1PQ3SYA9 428 aa17.09■□□□□ 0.33
CBWD3-211ENST00000615061 RFX8Q6ZV50 586 aa17.09■□□□□ 0.33
CBWD3-211ENST00000615061 AADATQ8N5Z0 425 aa17.09■□□□□ 0.33
CBWD3-211ENST00000615061 PABPC3Q9H361 631 aaKnown RBP17.09■□□□□ 0.33
CBWD3-211ENST00000615061 RETREG1Q9H6L5 497 aa17.09■□□□□ 0.33
CBWD3-211ENST00000615061 CATSPERBQ9H7T0 1116 aa17.09■□□□□ 0.33
CBWD3-211ENST00000615061 FBXL12Q9NXK8 326 aa17.09■□□□□ 0.33
CBWD3-211ENST00000615061 CWC15Q9P013 229 aaKnown RBP17.09■□□□□ 0.33
CBWD3-211ENST00000615061 A0A1W2PP55 124 aa17.08■□□□□ 0.33
CBWD3-211ENST00000615061 RNF103O00237 685 aa17.08■□□□□ 0.33
CBWD3-211ENST00000615061 PLK4O00444 970 aa17.08■□□□□ 0.33
CBWD3-211ENST00000615061 LRP3O75074 770 aa17.08■□□□□ 0.33
CBWD3-211ENST00000615061 MAOBP27338 520 aa17.08■□□□□ 0.33
CBWD3-211ENST00000615061 SLC8A1P32418 973 aa17.08■□□□□ 0.33
CBWD3-211ENST00000615061 SERPINH1P50454 418 aaKnown RBP17.08■□□□□ 0.33
CBWD3-211ENST00000615061 CSRP2Q16527 193 aa17.08■□□□□ 0.33
CBWD3-211ENST00000615061 TTC31Q49AM3 519 aaPredicted RBP17.08■□□□□ 0.33
CBWD3-211ENST00000615061 RETSATQ6NUM9 610 aa17.08■□□□□ 0.33
CBWD3-211ENST00000615061 C22orf39Q6P5X5 142 aa17.08■□□□□ 0.33
CBWD3-211ENST00000615061 PRR23CQ6ZRP0 262 aa17.08■□□□□ 0.33
CBWD3-211ENST00000615061 ZNF354CQ86Y25 554 aa17.08■□□□□ 0.33
CBWD3-211ENST00000615061 OR2A12Q8NGT7 310 aa17.08■□□□□ 0.33
CBWD3-211ENST00000615061 SLC35G2Q8TBE7 412 aa17.08■□□□□ 0.33
CBWD3-211ENST00000615061 GANCQ8TET4 914 aa17.08■□□□□ 0.33
CBWD3-211ENST00000615061 HMCESQ96FZ2 354 aa17.08■□□□□ 0.33
CBWD3-211ENST00000615061 ZNF419Q96HQ0 510 aaPredicted RBP17.08■□□□□ 0.33
CBWD3-211ENST00000615061 CELF6Q96J87 481 aaKnown RBP17.08■□□□□ 0.33
CBWD3-211ENST00000615061 STAU2Q9NUL3 570 aaKnown RBP eCLIP17.08■□□□□ 0.33
CBWD3-211ENST00000615061 UVRAGQ9P2Y5 699 aa17.08■□□□□ 0.33
CBWD3-211ENST00000615061 MFHAS1Q9Y4C4 1052 aa17.08■□□□□ 0.33
CBWD3-211ENST00000615061 RASA4BC9J798 803 aa17.07■□□□□ 0.32
CBWD3-211ENST00000615061 FGF10O15520 208 aaPredicted RBP17.07■□□□□ 0.32
CBWD3-211ENST00000615061 RASA4O43374 803 aa17.07■□□□□ 0.32
CBWD3-211ENST00000615061 GDF9O60383 454 aa17.07■□□□□ 0.32
CBWD3-211ENST00000615061 CTSLP07711 333 aa17.07■□□□□ 0.32
CBWD3-211ENST00000615061 ZNF806P0C7X5 589 aa17.07■□□□□ 0.32
CBWD3-211ENST00000615061 ERCC2P18074 760 aa17.07■□□□□ 0.32
CBWD3-211ENST00000615061 OXTRP30559 389 aa17.07■□□□□ 0.32
CBWD3-211ENST00000615061 SSR1P43307 286 aaKnown RBP17.07■□□□□ 0.32
CBWD3-211ENST00000615061 DPYSL2Q16555 572 aa17.07■□□□□ 0.32
CBWD3-211ENST00000615061 ATP13A4Q4VNC1 1196 aa17.07■□□□□ 0.32
CBWD3-211ENST00000615061 SPDYCQ5MJ68 293 aa17.07■□□□□ 0.32
CBWD3-211ENST00000615061 PSTKQ8IV42 348 aaKnown RBP17.07■□□□□ 0.32
CBWD3-211ENST00000615061 UMODL1-AS1Q8N2C9 162 aa17.07■□□□□ 0.32
CBWD3-211ENST00000615061 CHST14Q8NCH0 376 aa17.07■□□□□ 0.32
CBWD3-211ENST00000615061 OR8D1Q8WZ84 308 aa17.07■□□□□ 0.32
CBWD3-211ENST00000615061 NCAPGQ9BPX3 1015 aa17.07■□□□□ 0.32
CBWD3-211ENST00000615061 NEUROG2Q9H2A3 272 aa17.07■□□□□ 0.32
CBWD3-211ENST00000615061 C6orf106Q9H6K1 298 aaPredicted RBP17.07■□□□□ 0.32
CBWD3-211ENST00000615061 ASCC3Q8N3C0 2202 aaKnown RBP17.07■□□□□ 0.32
CBWD3-211ENST00000615061 MCF2LO15068 1137 aa17.07■□□□□ 0.32
CBWD3-211ENST00000615061 DAPK3O43293 454 aa17.07■□□□□ 0.32
CBWD3-211ENST00000615061 RNASEH2AO75792 299 aaKnown RBP17.07■□□□□ 0.32
CBWD3-211ENST00000615061 PROSCO94903 275 aa17.07■□□□□ 0.32
CBWD3-211ENST00000615061 DRD3P35462 400 aa17.07■□□□□ 0.32
CBWD3-211ENST00000615061 GJC1P36383 396 aa17.07■□□□□ 0.32
CBWD3-211ENST00000615061 ETFBP38117 255 aa17.07■□□□□ 0.32
CBWD3-211ENST00000615061 CLCN6P51797 869 aa17.07■□□□□ 0.32
CBWD3-211ENST00000615061 TAS2R40P59535 323 aa17.07■□□□□ 0.32
CBWD3-211ENST00000615061 BOLA3Q53S33 107 aa17.07■□□□□ 0.32
CBWD3-211ENST00000615061 NPWQ8N729 165 aa17.07■□□□□ 0.32
CBWD3-211ENST00000615061 BTBD1Q9H0C5 482 aa17.07■□□□□ 0.32
CBWD3-211ENST00000615061 LRRC19Q9H756 370 aa17.07■□□□□ 0.32
CBWD3-211ENST00000615061 VPS45Q9NRW7 570 aa17.07■□□□□ 0.32
CBWD3-211ENST00000615061 PILRBQ9UKJ0 227 aa17.07■□□□□ 0.32
CBWD3-211ENST00000615061 TFR2Q9UP52 801 aa17.07■□□□□ 0.32
CBWD3-211ENST00000615061 CABIN1Q9Y6J0 2220 aa17.07■□□□□ 0.32
CBWD3-211ENST00000615061 SHROOM3Q8TF72 1996 aa17.06■□□□□ 0.32
CBWD3-211ENST00000615061 TMEM110-MUSTN1A8MSY1 372 aa17.06■□□□□ 0.32
CBWD3-211ENST00000615061 EIF3CLB5ME19 914 aaKnown RBP17.06■□□□□ 0.32
CBWD3-211ENST00000615061 KDELR3O43731 214 aa17.06■□□□□ 0.32
CBWD3-211ENST00000615061 HTR7P34969 479 aa17.06■□□□□ 0.32
CBWD3-211ENST00000615061 DNA2P51530 1060 aa17.06■□□□□ 0.32
CBWD3-211ENST00000615061 DPYSQ14117 519 aa17.06■□□□□ 0.32
CBWD3-211ENST00000615061 DPY19L3Q6ZPD9 716 aa17.06■□□□□ 0.32
CBWD3-211ENST00000615061 SYT12Q8IV01 421 aa17.06■□□□□ 0.32
CBWD3-211ENST00000615061 TP53INP2Q8IXH6 220 aa17.06■□□□□ 0.32
CBWD3-211ENST00000615061 HDDC3Q8N4P3 179 aa17.06■□□□□ 0.32
CBWD3-211ENST00000615061 GPR161Q8N6U8 529 aaKnown RBP17.06■□□□□ 0.32
CBWD3-211ENST00000615061 PIP4K2CQ8TBX8 421 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms