RNA–Protein interactions for RNA: ENST00000610726.4

CSDE1-218, Transcript of cold shock domain containing E1, humanhuman

TSL 5 BASIC

Gene CSDE1, Length 4,312 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-218ENST00000610726 V9GYQ6 96 aa7.39□□□□□ -1.23
CSDE1-218ENST00000610726 AKAP11Q9UKA4 1901 aa7.39□□□□□ -1.23
CSDE1-218ENST00000610726 MPOP05164 745 aa7.39□□□□□ -1.23
CSDE1-218ENST00000610726 POLR2EP19388 210 aaKnown RBP7.39□□□□□ -1.23
CSDE1-218ENST00000610726 TFE3P19532 575 aaPredicted RBP7.39□□□□□ -1.23
CSDE1-218ENST00000610726 SERPINA4P29622 427 aa7.39□□□□□ -1.23
CSDE1-218ENST00000610726 KCNK10P57789 538 aa7.39□□□□□ -1.23
CSDE1-218ENST00000610726 OGDHQ02218 1023 aa7.39□□□□□ -1.23
CSDE1-218ENST00000610726 ITIH4Q14624 930 aa7.39□□□□□ -1.23
CSDE1-218ENST00000610726 TMCO4Q5TGY1 634 aa7.39□□□□□ -1.23
CSDE1-218ENST00000610726 DCAF12L1Q5VU92 463 aa7.39□□□□□ -1.23
CSDE1-218ENST00000610726 B3GNT9Q6UX72 402 aa7.39□□□□□ -1.23
CSDE1-218ENST00000610726 CMC1Q7Z7K0 106 aa7.39□□□□□ -1.23
CSDE1-218ENST00000610726 SUGP1Q8IWZ8 645 aaKnown RBP7.39□□□□□ -1.23
CSDE1-218ENST00000610726 SPATA6LQ8N4H0 392 aa7.39□□□□□ -1.23
CSDE1-218ENST00000610726 NAT16Q8N8M0 369 aa7.39□□□□□ -1.23
CSDE1-218ENST00000610726 SPATA22Q8NHS9 363 aa7.39□□□□□ -1.23
CSDE1-218ENST00000610726 PRCCQ92733 491 aaPredicted RBP7.39□□□□□ -1.23
CSDE1-218ENST00000610726 MLPHQ9BV36 600 aaPredicted RBP7.39□□□□□ -1.23
CSDE1-218ENST00000610726 BBS2Q9BXC9 721 aa7.39□□□□□ -1.23
CSDE1-218ENST00000610726 DOLKQ9UPQ8 538 aa7.39□□□□□ -1.23
CSDE1-218ENST00000610726 SLX4Q8IY92 1834 aa7.39□□□□□ -1.23
CSDE1-218ENST00000610726 MYH10P35580 1976 aa7.39□□□□□ -1.23
CSDE1-218ENST00000610726 SYCE1LA8MT33 242 aa7.38□□□□□ -1.23
CSDE1-218ENST00000610726 BTN3A1O00481 513 aa7.38□□□□□ -1.23
CSDE1-218ENST00000610726 KATNA1O75449 491 aa7.38□□□□□ -1.23
CSDE1-218ENST00000610726 CTPS1P17812 591 aa7.38□□□□□ -1.23
CSDE1-218ENST00000610726 LAG3P18627 525 aa7.38□□□□□ -1.23
CSDE1-218ENST00000610726 SERPINB3P29508 390 aa7.38□□□□□ -1.23
CSDE1-218ENST00000610726 GCKP35557 465 aa7.38□□□□□ -1.23
CSDE1-218ENST00000610726 WNT7BP56706 349 aa7.38□□□□□ -1.23
CSDE1-218ENST00000610726 HTRA3P83110 453 aa7.38□□□□□ -1.23
CSDE1-218ENST00000610726 POU5F1Q01860 360 aaKnown RBP7.38□□□□□ -1.23
CSDE1-218ENST00000610726 CDK18Q07002 472 aa7.38□□□□□ -1.23
CSDE1-218ENST00000610726 MAMDC4Q6UXC1 1216 aa7.38□□□□□ -1.23
CSDE1-218ENST00000610726 HFE2Q6ZVN8 426 aa7.38□□□□□ -1.23
CSDE1-218ENST00000610726 TTC7BQ86TV6 843 aa7.38□□□□□ -1.23
CSDE1-218ENST00000610726 SLC41A1Q8IVJ1 513 aa7.38□□□□□ -1.23
CSDE1-218ENST00000610726 TNS4Q8IZW8 715 aa7.38□□□□□ -1.23
CSDE1-218ENST00000610726 CRYBG2Q8N1P7 616 aa7.38□□□□□ -1.23
CSDE1-218ENST00000610726 TMEM130Q8N3G9 435 aa7.38□□□□□ -1.23
CSDE1-218ENST00000610726 POU5F2Q8N7G0 328 aa7.38□□□□□ -1.23
CSDE1-218ENST00000610726 FBXO22Q8NEZ5 403 aa7.38□□□□□ -1.23
CSDE1-218ENST00000610726 MIPOL1Q8TD10 442 aa7.38□□□□□ -1.23
CSDE1-218ENST00000610726 HDAC10Q969S8 669 aa7.38□□□□□ -1.23
CSDE1-218ENST00000610726 OMDQ99983 421 aa7.38□□□□□ -1.23
CSDE1-218ENST00000610726 AGO3Q9H9G7 860 aaKnown RBP7.38□□□□□ -1.23
CSDE1-218ENST00000610726 GLOD4Q9HC38 313 aa7.38□□□□□ -1.23
CSDE1-218ENST00000610726 THAP1Q9NVV9 213 aa7.38□□□□□ -1.23
CSDE1-218ENST00000610726 CNTN3Q9P232 1028 aa7.38□□□□□ -1.23
CSDE1-218ENST00000610726 FBXO5Q9UKT4 447 aa7.38□□□□□ -1.23
CSDE1-218ENST00000610726 CHKBQ9Y259 395 aa7.38□□□□□ -1.23
CSDE1-218ENST00000610726 MYO7AQ13402 2215 aa7.38□□□□□ -1.23
CSDE1-218ENST00000610726 MYADML2A6NDP7 307 aa7.38□□□□□ -1.23
CSDE1-218ENST00000610726 E9PAM4 449 aa7.38□□□□□ -1.23
CSDE1-218ENST00000610726 SYN3O14994 580 aa7.38□□□□□ -1.23
CSDE1-218ENST00000610726 TPST1O60507 370 aa7.38□□□□□ -1.23
CSDE1-218ENST00000610726 C1RP00736 705 aa7.38□□□□□ -1.23
CSDE1-218ENST00000610726 ATP5BP06576 529 aaKnown RBP7.38□□□□□ -1.23
CSDE1-218ENST00000610726 ITGA2BP08514 1039 aa7.38□□□□□ -1.23
CSDE1-218ENST00000610726 ABHD2P08910 425 aa7.38□□□□□ -1.23
CSDE1-218ENST00000610726 SLC10A3P09131 477 aa7.38□□□□□ -1.23
CSDE1-218ENST00000610726 CORO1AP31146 461 aaKnown RBP7.38□□□□□ -1.23
CSDE1-218ENST00000610726 PTGIRP43119 386 aa7.38□□□□□ -1.23
CSDE1-218ENST00000610726 GJA9P57773 515 aa7.38□□□□□ -1.23
CSDE1-218ENST00000610726 C11orf96Q7Z7L8 435 aa7.38□□□□□ -1.23
CSDE1-218ENST00000610726 OSTM1Q86WC4 334 aa7.38□□□□□ -1.23
CSDE1-218ENST00000610726 LRRC49Q8IUZ0 686 aa7.38□□□□□ -1.23
CSDE1-218ENST00000610726 FBXO39Q8N4B4 442 aa7.38□□□□□ -1.23
CSDE1-218ENST00000610726 APBB2Q92870 758 aa7.38□□□□□ -1.23
CSDE1-218ENST00000610726 ACOX2Q99424 681 aa7.38□□□□□ -1.23
CSDE1-218ENST00000610726 BCO2Q9BYV7 579 aa7.38□□□□□ -1.23
CSDE1-218ENST00000610726 XYLT2Q9H1B5 865 aa7.38□□□□□ -1.23
CSDE1-218ENST00000610726 KDM4CQ9H3R0 1056 aa7.38□□□□□ -1.23
CSDE1-218ENST00000610726 ACTR8Q9H981 624 aa7.38□□□□□ -1.23
CSDE1-218ENST00000610726 ARHGAP26Q9UNA1 814 aa7.38□□□□□ -1.23
CSDE1-218ENST00000610726 PCDHA11Q9Y5I1 949 aa7.38□□□□□ -1.23
CSDE1-218ENST00000610726 ARHGAP10A1A4S6 786 aa7.38□□□□□ -1.23
CSDE1-218ENST00000610726 C9IYK1 514 aa7.38□□□□□ -1.23
CSDE1-218ENST00000610726 CCNT2O60583 730 aaKnown RBP7.38□□□□□ -1.23
CSDE1-218ENST00000610726 FAM155BO75949 473 aa7.38□□□□□ -1.23
CSDE1-218ENST00000610726 MT-CYBP00156 380 aaPredicted RBP7.38□□□□□ -1.23
CSDE1-218ENST00000610726 FGBP02675 491 aa7.38□□□□□ -1.23
CSDE1-218ENST00000610726 CCDC166P0CW27 439 aa7.38□□□□□ -1.23
CSDE1-218ENST00000610726 IL10P22301 178 aa7.38□□□□□ -1.23
CSDE1-218ENST00000610726 CRABP2P29373 138 aa7.38□□□□□ -1.23
CSDE1-218ENST00000610726 ARHGDIAP52565 204 aa7.38□□□□□ -1.23
CSDE1-218ENST00000610726 AIF1P55008 147 aa7.38□□□□□ -1.23
CSDE1-218ENST00000610726 CCDC153Q494R4 210 aa7.38□□□□□ -1.23
CSDE1-218ENST00000610726 FNBP1LQ5T0N5 605 aa7.38□□□□□ -1.23
CSDE1-218ENST00000610726 SCARA3Q6AZY7 606 aa7.38□□□□□ -1.23
CSDE1-218ENST00000610726 LINGO4Q6UY18 593 aa7.38□□□□□ -1.23
CSDE1-218ENST00000610726 TMEM110Q86TL2 294 aa7.38□□□□□ -1.23
CSDE1-218ENST00000610726 CKAP2Q8WWK9 683 aa7.38□□□□□ -1.23
CSDE1-218ENST00000610726 ATXN2LQ8WWM7 1075 aaKnown RBP7.38□□□□□ -1.23
CSDE1-218ENST00000610726 AUTS2Q8WXX7 1259 aa7.38□□□□□ -1.23
CSDE1-218ENST00000610726 FAXDC2Q96IV6 333 aa7.38□□□□□ -1.23
CSDE1-218ENST00000610726 ASPSCR1Q9BZE9 553 aa7.38□□□□□ -1.23
CSDE1-218ENST00000610726 ALG9Q9H6U8 611 aa7.38□□□□□ -1.23
CSDE1-218ENST00000610726 ASB8Q9H765 288 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 94.1 ms