RNA–Protein interactions for RNA: ENST00000610354.4

CD9-212, Transcript of CD9 molecule, humanhuman

TSL 5 BASIC

Gene CD9, Length 1,315 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-212ENST00000610354 ANAPC7Q9UJX3 599 aa13.04□□□□□ -0.32
CD9-212ENST00000610354 CACNA1EQ15878 2313 aa13.03□□□□□ -0.32
CD9-212ENST00000610354 PCDH15Q96QU1 1955 aa13.03□□□□□ -0.32
CD9-212ENST00000610354 METTL12A8MUP2 240 aa13.03□□□□□ -0.32
CD9-212ENST00000610354 PLK4O00444 970 aa13.03□□□□□ -0.32
CD9-212ENST00000610354 NDUFS2O75306 463 aa13.03□□□□□ -0.32
CD9-212ENST00000610354 RNF8O76064 485 aa13.03□□□□□ -0.32
CD9-212ENST00000610354 DNTTP04053 509 aa13.03□□□□□ -0.32
CD9-212ENST00000610354 CTSLP07711 333 aa13.03□□□□□ -0.32
CD9-212ENST00000610354 MAOBP27338 520 aa13.03□□□□□ -0.32
CD9-212ENST00000610354 OXTRP30559 389 aa13.03□□□□□ -0.32
CD9-212ENST00000610354 SLC8A1P32418 973 aa13.03□□□□□ -0.32
CD9-212ENST00000610354 DRD3P35462 400 aa13.03□□□□□ -0.32
CD9-212ENST00000610354 PCK1P35558 622 aa13.03□□□□□ -0.32
CD9-212ENST00000610354 NNMTP40261 264 aa13.03□□□□□ -0.32
CD9-212ENST00000610354 PSMD8P48556 350 aa13.03□□□□□ -0.32
CD9-212ENST00000610354 C22orf39Q6P5X5 142 aa13.03□□□□□ -0.32
CD9-212ENST00000610354 LEKR1Q6ZMV7 388 aa13.03□□□□□ -0.32
CD9-212ENST00000610354 SYT12Q8IV01 421 aa13.03□□□□□ -0.32
CD9-212ENST00000610354 NIPA2Q8N8Q9 360 aa13.03□□□□□ -0.32
CD9-212ENST00000610354 ATP11CQ8NB49 1132 aa13.03□□□□□ -0.32
CD9-212ENST00000610354 CHST14Q8NCH0 376 aa13.03□□□□□ -0.32
CD9-212ENST00000610354 OR2A12Q8NGT7 310 aa13.03□□□□□ -0.32
CD9-212ENST00000610354 EPAS1Q99814 870 aa13.03□□□□□ -0.32
CD9-212ENST00000610354 MAGEH1Q9H213 219 aa13.03□□□□□ -0.32
CD9-212ENST00000610354 NEUROG2Q9H2A3 272 aa13.03□□□□□ -0.32
CD9-212ENST00000610354 TNKS2Q9H2K2 1166 aa13.03□□□□□ -0.32
CD9-212ENST00000610354 C6orf106Q9H6K1 298 aaPredicted RBP13.03□□□□□ -0.32
CD9-212ENST00000610354 PPM1HQ9ULR3 514 aa13.03□□□□□ -0.32
CD9-212ENST00000610354 SLCO1B1Q9Y6L6 691 aa13.03□□□□□ -0.32
CD9-212ENST00000610354 KNL1Q8NG31 2342 aa13.02□□□□□ -0.32
CD9-212ENST00000610354 A0A1W2PP55 124 aa13.02□□□□□ -0.33
CD9-212ENST00000610354 MCF2LO15068 1137 aa13.02□□□□□ -0.33
CD9-212ENST00000610354 KDELR3O43731 214 aa13.02□□□□□ -0.33
CD9-212ENST00000610354 PRPSAP2O60256 369 aa13.02□□□□□ -0.33
CD9-212ENST00000610354 RAMP2O60895 175 aa13.02□□□□□ -0.33
CD9-212ENST00000610354 RARAP10276 462 aa13.02□□□□□ -0.33
CD9-212ENST00000610354 GOT1P17174 413 aa13.02□□□□□ -0.33
CD9-212ENST00000610354 SERPINH1P50454 418 aaKnown RBP13.02□□□□□ -0.33
CD9-212ENST00000610354 TPI1P60174 286 aa13.02□□□□□ -0.33
CD9-212ENST00000610354 IRX4P78413 519 aa13.02□□□□□ -0.33
CD9-212ENST00000610354 SLC25A11Q02978 314 aaKnown RBP13.02□□□□□ -0.33
CD9-212ENST00000610354 PIGHQ14442 188 aaPredicted RBP13.02□□□□□ -0.33
CD9-212ENST00000610354 ELAVL3Q14576 367 aaKnown RBP13.02□□□□□ -0.33
CD9-212ENST00000610354 ACAP1Q15027 740 aa13.02□□□□□ -0.33
CD9-212ENST00000610354 POLD3Q15054 466 aaPredicted RBP13.02□□□□□ -0.33
CD9-212ENST00000610354 RSPO4Q2I0M5 234 aaPredicted RBP13.02□□□□□ -0.33
CD9-212ENST00000610354 KCNT1Q5JUK3 1230 aa13.02□□□□□ -0.33
CD9-212ENST00000610354 DCAF12L1Q5VU92 463 aa13.02□□□□□ -0.33
CD9-212ENST00000610354 IL31Q6EBC2 164 aa13.02□□□□□ -0.33
CD9-212ENST00000610354 USP30Q70CQ3 517 aa13.02□□□□□ -0.33
CD9-212ENST00000610354 CNGA4Q8IV77 575 aa13.02□□□□□ -0.33
CD9-212ENST00000610354 TP53INP2Q8IXH6 220 aa13.02□□□□□ -0.33
CD9-212ENST00000610354 UMODL1-AS1Q8N2C9 162 aa13.02□□□□□ -0.33
CD9-212ENST00000610354 NETO2Q8NC67 525 aa13.02□□□□□ -0.33
CD9-212ENST00000610354 CADM4Q8NFZ8 388 aa13.02□□□□□ -0.33
CD9-212ENST00000610354 C1orf216Q8TAB5 229 aa13.02□□□□□ -0.33
CD9-212ENST00000610354 ZNF564Q8TBZ8 553 aaPredicted RBP13.02□□□□□ -0.33
CD9-212ENST00000610354 DNASE2BQ8WZ79 361 aa13.02□□□□□ -0.33
CD9-212ENST00000610354 OR8D1Q8WZ84 308 aa13.02□□□□□ -0.33
CD9-212ENST00000610354 FAM131CQ96AQ9 280 aa13.02□□□□□ -0.33
CD9-212ENST00000610354 HMCESQ96FZ2 354 aa13.02□□□□□ -0.33
CD9-212ENST00000610354 MRFAP1L1Q96HT8 127 aa13.02□□□□□ -0.33
CD9-212ENST00000610354 LRRC19Q9H756 370 aa13.02□□□□□ -0.33
CD9-212ENST00000610354 OSGEPQ9NPF4 335 aa13.02□□□□□ -0.33
CD9-212ENST00000610354 FSCN3Q9NQT6 498 aa13.02□□□□□ -0.33
CD9-212ENST00000610354 ZNHIT6Q9NWK9 470 aaKnown RBP13.02□□□□□ -0.33
CD9-212ENST00000610354 FBXL12Q9NXK8 326 aa13.02□□□□□ -0.33
CD9-212ENST00000610354 CWC15Q9P013 229 aaKnown RBP13.02□□□□□ -0.33
CD9-212ENST00000610354 IP6K2Q9UHH9 426 aa13.02□□□□□ -0.33
CD9-212ENST00000610354 FCF1Q9Y324 198 aaKnown RBP13.02□□□□□ -0.33
CD9-212ENST00000610354 MFHAS1Q9Y4C4 1052 aa13.02□□□□□ -0.33
CD9-212ENST00000610354 DCHS1Q96JQ0 3298 aa13.02□□□□□ -0.33
CD9-212ENST00000610354 PLXNA2O75051 1894 aa13.01□□□□□ -0.33
CD9-212ENST00000610354 RASA4BC9J798 803 aa13.01□□□□□ -0.33
CD9-212ENST00000610354 EEF2KO00418 725 aaKnown RBP13.01□□□□□ -0.33
CD9-212ENST00000610354 RASA4O43374 803 aa13.01□□□□□ -0.33
CD9-212ENST00000610354 AKR1B10O60218 316 aa13.01□□□□□ -0.33
CD9-212ENST00000610354 BNIP3LO60238 219 aa13.01□□□□□ -0.33
CD9-212ENST00000610354 RNASEH1O60930 286 aaKnown RBP13.01□□□□□ -0.33
CD9-212ENST00000610354 IL1BP01584 269 aa13.01□□□□□ -0.33
CD9-212ENST00000610354 TPM1P09493 284 aa13.01□□□□□ -0.33
CD9-212ENST00000610354 H2AFZP0C0S5 128 aa13.01□□□□□ -0.33
CD9-212ENST00000610354 TMEM253P0C7T8 217 aa13.01□□□□□ -0.33
CD9-212ENST00000610354 DESP17661 470 aa13.01□□□□□ -0.33
CD9-212ENST00000610354 ERCC2P18074 760 aa13.01□□□□□ -0.33
CD9-212ENST00000610354 LMNB2Q03252 620 aa13.01□□□□□ -0.33
CD9-212ENST00000610354 SLC20A2Q08357 652 aa13.01□□□□□ -0.33
CD9-212ENST00000610354 DPYSQ14117 519 aa13.01□□□□□ -0.33
CD9-212ENST00000610354 SMTNL2Q2TAL5 461 aa13.01□□□□□ -0.33
CD9-212ENST00000610354 TTC31Q49AM3 519 aaPredicted RBP13.01□□□□□ -0.33
CD9-212ENST00000610354 ATP13A4Q4VNC1 1196 aa13.01□□□□□ -0.33
CD9-212ENST00000610354 AFMIDQ63HM1 303 aa13.01□□□□□ -0.33
CD9-212ENST00000610354 DPY19L3Q6ZPD9 716 aa13.01□□□□□ -0.33
CD9-212ENST00000610354 RFX8Q6ZV50 586 aa13.01□□□□□ -0.33
CD9-212ENST00000610354 H2AFVQ71UI9 128 aa13.01□□□□□ -0.33
CD9-212ENST00000610354 PSTKQ8IV42 348 aaKnown RBP13.01□□□□□ -0.33
CD9-212ENST00000610354 ARHGAP12Q8IWW6 846 aa13.01□□□□□ -0.33
CD9-212ENST00000610354 HDDC3Q8N4P3 179 aa13.01□□□□□ -0.33
CD9-212ENST00000610354 PIP4K2CQ8TBX8 421 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms