RNA–Protein interactions for RNA: ENST00000607482.5

CTSA-217, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 403 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-217ENST00000607482 A0A1W2PPC4 97 aa19.64■□□□□ 0.73
CTSA-217ENST00000607482 K7ERQ8 282 aa19.64■□□□□ 0.73
CTSA-217ENST00000607482 SLC7A4O43246 635 aa19.64■□□□□ 0.73
CTSA-217ENST00000607482 SH3BP5O60239 455 aa19.64■□□□□ 0.73
CTSA-217ENST00000607482 RTN2O75298 545 aa19.64■□□□□ 0.73
CTSA-217ENST00000607482 IGHV4-34P06331 123 aa19.64■□□□□ 0.73
CTSA-217ENST00000607482 RHOQP17081 205 aa19.64■□□□□ 0.73
CTSA-217ENST00000607482 CHRNA3P32297 505 aa19.64■□□□□ 0.73
CTSA-217ENST00000607482 MAPKAPK2P49137 400 aa19.64■□□□□ 0.73
CTSA-217ENST00000607482 CCR5P51681 352 aa19.64■□□□□ 0.73
CTSA-217ENST00000607482 HDAC4P56524 1084 aa19.64■□□□□ 0.73
CTSA-217ENST00000607482 GSCP56915 257 aaPredicted RBP19.64■□□□□ 0.73
CTSA-217ENST00000607482 GEMIN4P57678 1058 aaKnown RBP19.64■□□□□ 0.73
CTSA-217ENST00000607482 KLHL30Q0D2K2 578 aa19.64■□□□□ 0.73
CTSA-217ENST00000607482 CNTN1Q12860 1018 aa19.64■□□□□ 0.73
CTSA-217ENST00000607482 KIF19Q2TAC6 998 aa19.64■□□□□ 0.73
CTSA-217ENST00000607482 RAB6CQ53S08 254 aa19.64■□□□□ 0.73
CTSA-217ENST00000607482 IRF2BP2Q7Z5L9 587 aa19.64■□□□□ 0.73
CTSA-217ENST00000607482 NAXDQ8IW45 347 aa19.64■□□□□ 0.73
CTSA-217ENST00000607482 MCOLN2Q8IZK6 566 aa19.64■□□□□ 0.73
CTSA-217ENST00000607482 CCDC185Q8N715 623 aa19.64■□□□□ 0.73
CTSA-217ENST00000607482 GRIN3AQ8TCU5 1115 aa19.64■□□□□ 0.73
CTSA-217ENST00000607482 PPP1R16AQ96I34 528 aa19.64■□□□□ 0.73
CTSA-217ENST00000607482 CNTNAP3BQ96NU0 1288 aa19.64■□□□□ 0.73
CTSA-217ENST00000607482 EPAS1Q99814 870 aa19.64■□□□□ 0.73
CTSA-217ENST00000607482 CNPY3Q9BT09 278 aa19.64■□□□□ 0.73
CTSA-217ENST00000607482 CNTNAP3Q9BZ76 1288 aa19.64■□□□□ 0.73
CTSA-217ENST00000607482 RAB6CQ9H0N0 254 aa19.64■□□□□ 0.73
CTSA-217ENST00000607482 TNKS2Q9H2K2 1166 aa19.64■□□□□ 0.73
CTSA-217ENST00000607482 RETREG1Q9H6L5 497 aa19.64■□□□□ 0.73
CTSA-217ENST00000607482 SNX11Q9Y5W9 270 aa19.64■□□□□ 0.73
CTSA-217ENST00000607482 A0A1B0GTH6 734 aa19.63■□□□□ 0.73
CTSA-217ENST00000607482 PLK4O00444 970 aa19.63■□□□□ 0.73
CTSA-217ENST00000607482 CREB3O43889 395 aa19.63■□□□□ 0.73
CTSA-217ENST00000607482 RAMP2O60895 175 aa19.63■□□□□ 0.73
CTSA-217ENST00000607482 CD59P13987 128 aa19.63■□□□□ 0.73
CTSA-217ENST00000607482 PMLP29590 882 aa19.63■□□□□ 0.73
CTSA-217ENST00000607482 TRIP6Q15654 476 aaKnown RBP19.63■□□□□ 0.73
CTSA-217ENST00000607482 C22orf39Q6P5X5 142 aa19.63■□□□□ 0.73
CTSA-217ENST00000607482 PIP4P1Q86T03 277 aa19.63■□□□□ 0.73
CTSA-217ENST00000607482 LUZP1Q86V48 1076 aa19.63■□□□□ 0.73
CTSA-217ENST00000607482 C1orf216Q8TAB5 229 aa19.63■□□□□ 0.73
CTSA-217ENST00000607482 CENPIQ92674 756 aaPredicted RBP19.63■□□□□ 0.73
CTSA-217ENST00000607482 NTAN1Q96AB6 310 aa19.63■□□□□ 0.73
CTSA-217ENST00000607482 VCPIP1Q96JH7 1222 aa19.63■□□□□ 0.73
CTSA-217ENST00000607482 SLC6A18Q96N87 628 aa19.63■□□□□ 0.73
CTSA-217ENST00000607482 NAP1L5Q96NT1 182 aaPredicted RBP19.63■□□□□ 0.73
CTSA-217ENST00000607482 KDM4CQ9H3R0 1056 aa19.63■□□□□ 0.73
CTSA-217ENST00000607482 HAUS4Q9H6D7 363 aa19.63■□□□□ 0.73
CTSA-217ENST00000607482 IL21RQ9HBE5 538 aa19.63■□□□□ 0.73
CTSA-217ENST00000607482 CBX8Q9HC52 389 aa19.63■□□□□ 0.73
CTSA-217ENST00000607482 IL36AQ9UHA7 158 aa19.63■□□□□ 0.73
CTSA-217ENST00000607482 SARDHQ9UL12 918 aa19.63■□□□□ 0.73
CTSA-217ENST00000607482 NUMA1Q14980 2115 aa19.63■□□□□ 0.73
CTSA-217ENST00000607482 CCP110O43303 1012 aa19.62■□□□□ 0.73
CTSA-217ENST00000607482 SMAD6O43541 496 aaKnown RBP19.62■□□□□ 0.73
CTSA-217ENST00000607482 LRIG2O94898 1065 aa19.62■□□□□ 0.73
CTSA-217ENST00000607482 GLDCP23378 1020 aa19.62■□□□□ 0.73
CTSA-217ENST00000607482 PSMA2P25787 234 aa19.62■□□□□ 0.73
CTSA-217ENST00000607482 EPHB2P29323 1055 aa19.62■□□□□ 0.73
CTSA-217ENST00000607482 MAT2AP31153 395 aaKnown RBP19.62■□□□□ 0.73
CTSA-217ENST00000607482 SERPINH1P50454 418 aaKnown RBP19.62■□□□□ 0.73
CTSA-217ENST00000607482 UBASH3AP57075 661 aa19.62■□□□□ 0.73
CTSA-217ENST00000607482 RPL7AP62424 266 aaKnown RBP19.62■□□□□ 0.73
CTSA-217ENST00000607482 NRG1Q02297 640 aaPredicted RBP19.62■□□□□ 0.73
CTSA-217ENST00000607482 POLD3Q15054 466 aaPredicted RBP19.62■□□□□ 0.73
CTSA-217ENST00000607482 ARSIQ5FYB1 569 aa19.62■□□□□ 0.73
CTSA-217ENST00000607482 LAYNQ6UX15 382 aa19.62■□□□□ 0.73
CTSA-217ENST00000607482 TMC6Q7Z403 805 aa19.62■□□□□ 0.73
CTSA-217ENST00000607482 VPS36Q86VN1 386 aa19.62■□□□□ 0.73
CTSA-217ENST00000607482 TMIEQ8NEW7 156 aa19.62■□□□□ 0.73
CTSA-217ENST00000607482 OR2A12Q8NGT7 310 aa19.62■□□□□ 0.73
CTSA-217ENST00000607482 RHBDD1Q8TEB9 315 aa19.62■□□□□ 0.73
CTSA-217ENST00000607482 BAP1Q92560 729 aa19.62■□□□□ 0.73
CTSA-217ENST00000607482 CAMK1GQ96NX5 476 aa19.62■□□□□ 0.73
CTSA-217ENST00000607482 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.62■□□□□ 0.73
CTSA-217ENST00000607482 CEP44Q9C0F1 390 aa19.62■□□□□ 0.73
CTSA-217ENST00000607482 MAGEH1Q9H213 219 aa19.62■□□□□ 0.73
CTSA-217ENST00000607482 FNDC3AQ9Y2H6 1198 aaKnown RBP19.62■□□□□ 0.73
CTSA-217ENST00000607482 ASCC3Q8N3C0 2202 aaKnown RBP19.61■□□□□ 0.73
CTSA-217ENST00000607482 FAM72CH0Y354 149 aa19.61■□□□□ 0.73
CTSA-217ENST00000607482 DFNA5O60443 496 aa19.61■□□□□ 0.73
CTSA-217ENST00000607482 FTLP02792 175 aaPredicted RBP19.61■□□□□ 0.73
CTSA-217ENST00000607482 TPM3P06753 285 aa19.61■□□□□ 0.73
CTSA-217ENST00000607482 ZNF883P0CG24 379 aa19.61■□□□□ 0.73
CTSA-217ENST00000607482 CD38P28907 300 aa19.61■□□□□ 0.73
CTSA-217ENST00000607482 DRD3P35462 400 aa19.61■□□□□ 0.73
CTSA-217ENST00000607482 NUDT1P36639 197 aa19.61■□□□□ 0.73
CTSA-217ENST00000607482 METAP1P53582 386 aa19.61■□□□□ 0.73
CTSA-217ENST00000607482 AIF1P55008 147 aa19.61■□□□□ 0.73
CTSA-217ENST00000607482 FANCCQ00597 558 aa19.61■□□□□ 0.73
CTSA-217ENST00000607482 STAT4Q14765 748 aa19.61■□□□□ 0.73
CTSA-217ENST00000607482 IQCB1Q15051 598 aa19.61■□□□□ 0.73
CTSA-217ENST00000607482 INAVAQ3KP66 663 aa19.61■□□□□ 0.73
CTSA-217ENST00000607482 SETMARQ53H47 684 aaPredicted RBP19.61■□□□□ 0.73
CTSA-217ENST00000607482 TDRD12Q587J7 1177 aaKnown RBP19.61■□□□□ 0.73
CTSA-217ENST00000607482 FAM72AQ5TYM5 149 aa19.61■□□□□ 0.73
CTSA-217ENST00000607482 FAM72DQ6L9T8 149 aa19.61■□□□□ 0.73
CTSA-217ENST00000607482 FAM72BQ86X60 149 aa19.61■□□□□ 0.73
CTSA-217ENST00000607482 PCDH20Q8N6Y1 951 aaKnown RBP19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms