RNA–Protein interactions for RNA: ENST00000606000.1

CTSA-210, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 644 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-210ENST00000606000 SLC6A18Q96N87 628 aa12.58□□□□□ -0.4
CTSA-210ENST00000606000 CAMK1GQ96NX5 476 aa12.58□□□□□ -0.4
CTSA-210ENST00000606000 OSBPL2Q9H1P3 480 aa12.58□□□□□ -0.4
CTSA-210ENST00000606000 PCED1AQ9H1Q7 454 aa12.58□□□□□ -0.4
CTSA-210ENST00000606000 TM9SF3Q9HD45 589 aa12.58□□□□□ -0.4
CTSA-210ENST00000606000 IFNKQ9P0W0 207 aa12.58□□□□□ -0.4
CTSA-210ENST00000606000 ADAMTS1Q9UHI8 967 aa12.58□□□□□ -0.4
CTSA-210ENST00000606000 FZD4Q9ULV1 537 aa12.58□□□□□ -0.4
CTSA-210ENST00000606000 FCF1Q9Y324 198 aaKnown RBP12.58□□□□□ -0.4
CTSA-210ENST00000606000 PI4KAP42356 2102 aa12.58□□□□□ -0.4
CTSA-210ENST00000606000 ILVBLA1L0T0 632 aa12.57□□□□□ -0.4
CTSA-210ENST00000606000 C10orf142B7Z368 130 aa12.57□□□□□ -0.4
CTSA-210ENST00000606000 GOLGA6L19H0YKK7 550 aa12.57□□□□□ -0.4
CTSA-210ENST00000606000 OPHN1O60890 802 aa12.57□□□□□ -0.4
CTSA-210ENST00000606000 ZNF821O75541 412 aaPredicted RBP12.57□□□□□ -0.4
CTSA-210ENST00000606000 GJB3O75712 270 aa12.57□□□□□ -0.4
CTSA-210ENST00000606000 SYPP08247 313 aa12.57□□□□□ -0.4
CTSA-210ENST00000606000 CD59P13987 128 aa12.57□□□□□ -0.4
CTSA-210ENST00000606000 RHOQP17081 205 aa12.57□□□□□ -0.4
CTSA-210ENST00000606000 GOT1P17174 413 aa12.57□□□□□ -0.4
CTSA-210ENST00000606000 SERPINH1P50454 418 aaKnown RBP12.57□□□□□ -0.4
CTSA-210ENST00000606000 TPM4P67936 248 aa12.57□□□□□ -0.4
CTSA-210ENST00000606000 FAM193AP78312 1265 aa12.57□□□□□ -0.4
CTSA-210ENST00000606000 SCAPQ12770 1279 aa12.57□□□□□ -0.4
CTSA-210ENST00000606000 CNTN1Q12860 1018 aa12.57□□□□□ -0.4
CTSA-210ENST00000606000 SEMA3BQ13214 749 aa12.57□□□□□ -0.4
CTSA-210ENST00000606000 FIGNQ5HY92 759 aa12.57□□□□□ -0.4
CTSA-210ENST00000606000 AGBL4Q5VU57 503 aa12.57□□□□□ -0.4
CTSA-210ENST00000606000 HGSNATQ68CP4 663 aa12.57□□□□□ -0.4
CTSA-210ENST00000606000 PLEKHA7Q6IQ23 1121 aa12.57□□□□□ -0.4
CTSA-210ENST00000606000 TMC6Q7Z403 805 aa12.57□□□□□ -0.4
CTSA-210ENST00000606000 ARFGAP1Q8N6T3 406 aa12.57□□□□□ -0.4
CTSA-210ENST00000606000 NETO2Q8NC67 525 aa12.57□□□□□ -0.4
CTSA-210ENST00000606000 GRIN3AQ8TCU5 1115 aa12.57□□□□□ -0.4
CTSA-210ENST00000606000 CPLX3Q8WVH0 158 aa12.57□□□□□ -0.4
CTSA-210ENST00000606000 ARHGEF2Q92974 986 aaKnown RBP12.57□□□□□ -0.4
CTSA-210ENST00000606000 ARRDC3Q96B67 414 aa12.57□□□□□ -0.4
CTSA-210ENST00000606000 ZNF653Q96CK0 615 aa12.57□□□□□ -0.4
CTSA-210ENST00000606000 PEBP4Q96S96 227 aa12.57□□□□□ -0.4
CTSA-210ENST00000606000 PPP1R9BQ96SB3 815 aa12.57□□□□□ -0.4
CTSA-210ENST00000606000 CNPY3Q9BT09 278 aa12.57□□□□□ -0.4
CTSA-210ENST00000606000 TMEM248Q9NWD8 314 aa12.57□□□□□ -0.4
CTSA-210ENST00000606000 PPM1HQ9ULR3 514 aa12.57□□□□□ -0.4
CTSA-210ENST00000606000 FZD10Q9ULW2 581 aa12.57□□□□□ -0.4
CTSA-210ENST00000606000 FNDC3AQ9Y2H6 1198 aaKnown RBP12.57□□□□□ -0.4
CTSA-210ENST00000606000 SPAARA0A1B0GVQ0 90 aa12.56□□□□□ -0.4
CTSA-210ENST00000606000 KCNK3O14649 394 aa12.56□□□□□ -0.4
CTSA-210ENST00000606000 MCF2LO15068 1137 aa12.56□□□□□ -0.4
CTSA-210ENST00000606000 CREB3O43889 395 aa12.56□□□□□ -0.4
CTSA-210ENST00000606000 TOP3BO95985 862 aaKnown RBP12.56□□□□□ -0.4
CTSA-210ENST00000606000 FTLP02792 175 aaPredicted RBP12.56□□□□□ -0.4
CTSA-210ENST00000606000 WNT1P04628 370 aa12.56□□□□□ -0.4
CTSA-210ENST00000606000 PSMA2P25787 234 aa12.56□□□□□ -0.4
CTSA-210ENST00000606000 CD27P26842 260 aa12.56□□□□□ -0.4
CTSA-210ENST00000606000 CA9Q16790 459 aa12.56□□□□□ -0.4
CTSA-210ENST00000606000 KIF19Q2TAC6 998 aa12.56□□□□□ -0.4
CTSA-210ENST00000606000 TDRD12Q587J7 1177 aaKnown RBP12.56□□□□□ -0.4
CTSA-210ENST00000606000 EFHC2Q5JST6 749 aa12.56□□□□□ -0.4
CTSA-210ENST00000606000 ACBD5Q5T8D3 534 aaPredicted RBP12.56□□□□□ -0.4
CTSA-210ENST00000606000 LRSAM1Q6UWE0 723 aa12.56□□□□□ -0.4
CTSA-210ENST00000606000 ZNF783Q6ZMS7 281 aa12.56□□□□□ -0.4
CTSA-210ENST00000606000 OR2T34Q8NGX1 318 aa12.56□□□□□ -0.4
CTSA-210ENST00000606000 OR6K2Q8NGY2 324 aa12.56□□□□□ -0.4
CTSA-210ENST00000606000 FAM131CQ96AQ9 280 aa12.56□□□□□ -0.4
CTSA-210ENST00000606000 ACE2Q9BYF1 805 aaPredicted RBP12.56□□□□□ -0.4
CTSA-210ENST00000606000 TM6SF2Q9BZW4 377 aa12.56□□□□□ -0.4
CTSA-210ENST00000606000 XPO4Q9C0E2 1151 aaKnown RBP12.56□□□□□ -0.4
CTSA-210ENST00000606000 KLC2Q9H0B6 622 aa12.56□□□□□ -0.4
CTSA-210ENST00000606000 NOL6Q9H6R4 1146 aaKnown RBP12.56□□□□□ -0.4
CTSA-210ENST00000606000 DNAAF2Q9NVR5 837 aaKnown RBP12.56□□□□□ -0.4
CTSA-210ENST00000606000 TMEM51Q9NW97 253 aa12.56□□□□□ -0.4
CTSA-210ENST00000606000 MYO1AQ9UBC5 1043 aa12.56□□□□□ -0.4
CTSA-210ENST00000606000 CNOT8Q9UFF9 292 aaKnown RBP12.56□□□□□ -0.4
CTSA-210ENST00000606000 SNX11Q9Y5W9 270 aa12.56□□□□□ -0.4
CTSA-210ENST00000606000 A0A1W2PPC4 97 aa12.55□□□□□ -0.4
CTSA-210ENST00000606000 A0A1W2PQJ5 194 aa12.55□□□□□ -0.4
CTSA-210ENST00000606000 ANKRD62A6NC57 917 aa12.55□□□□□ -0.4
CTSA-210ENST00000606000 LRRC72A6NJI9 287 aa12.55□□□□□ -0.4
CTSA-210ENST00000606000 C1QTNF3-AMACRE9PGA6 284 aa12.55□□□□□ -0.4
CTSA-210ENST00000606000 ALOX15BO15296 676 aa12.55□□□□□ -0.4
CTSA-210ENST00000606000 PLRG1O43660 514 aaKnown RBP12.55□□□□□ -0.4
CTSA-210ENST00000606000 GYPCP04921 128 aa12.55□□□□□ -0.4
CTSA-210ENST00000606000 PTMSP20962 102 aa12.55□□□□□ -0.4
CTSA-210ENST00000606000 CSRP1P21291 193 aaKnown RBP12.55□□□□□ -0.4
CTSA-210ENST00000606000 EPHB2P29323 1055 aa12.55□□□□□ -0.4
CTSA-210ENST00000606000 MAT2AP31153 395 aaKnown RBP12.55□□□□□ -0.4
CTSA-210ENST00000606000 L1CAMP32004 1257 aa12.55□□□□□ -0.4
CTSA-210ENST00000606000 GKP32189 559 aa12.55□□□□□ -0.4
CTSA-210ENST00000606000 CHRNA3P32297 505 aa12.55□□□□□ -0.4
CTSA-210ENST00000606000 MAPKAPK2P49137 400 aa12.55□□□□□ -0.4
CTSA-210ENST00000606000 AFF3P51826 1226 aaKnown RBP12.55□□□□□ -0.4
CTSA-210ENST00000606000 TAS2R38P59533 333 aa12.55□□□□□ -0.4
CTSA-210ENST00000606000 HLA-BQ31612 363 aa12.55□□□□□ -0.4
CTSA-210ENST00000606000 PIP5KL1Q5T9C9 394 aa12.55□□□□□ -0.4
CTSA-210ENST00000606000 DPY19L3Q6ZPD9 716 aa12.55□□□□□ -0.4
CTSA-210ENST00000606000 CYP4V2Q6ZWL3 525 aaPredicted RBP12.55□□□□□ -0.4
CTSA-210ENST00000606000 DSG4Q86SJ6 1040 aa12.55□□□□□ -0.4
CTSA-210ENST00000606000 PIP4P1Q86T03 277 aa12.55□□□□□ -0.4
CTSA-210ENST00000606000 RTL3Q8N8U3 475 aaKnown RBP12.55□□□□□ -0.4
CTSA-210ENST00000606000 VCPIP1Q96JH7 1222 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms