RNA–Protein interactions for RNA: ENST00000601291.5

IRF3-228, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-228ENST00000601291 CAVIN3Q969G5 261 aa23.03■■□□□ 1.28
IRF3-228ENST00000601291 FEM1AQ9BSK4 669 aa23.03■■□□□ 1.28
IRF3-228ENST00000601291 CBX4O00257 560 aa23.02■■□□□ 1.28
IRF3-228ENST00000601291 NFATC1O95644 943 aa23.02■■□□□ 1.28
IRF3-228ENST00000601291 ADH1CP00326 375 aa23.02■■□□□ 1.28
IRF3-228ENST00000601291 FAM153BP0C7A2 387 aa23.02■■□□□ 1.28
IRF3-228ENST00000601291 LAMP2P13473 410 aa23.02■■□□□ 1.28
IRF3-228ENST00000601291 TYRP14679 529 aa23.02■■□□□ 1.28
IRF3-228ENST00000601291 PSMB4P28070 264 aa23.02■■□□□ 1.28
IRF3-228ENST00000601291 TNNT3P45378 269 aaPredicted RBP23.02■■□□□ 1.28
IRF3-228ENST00000601291 LMAN1P49257 510 aa23.02■■□□□ 1.28
IRF3-228ENST00000601291 SLC12A1Q13621 1099 aa23.02■■□□□ 1.28
IRF3-228ENST00000601291 KCNJ11Q14654 390 aa23.02■■□□□ 1.28
IRF3-228ENST00000601291 EML3Q32P44 896 aa23.02■■□□□ 1.28
IRF3-228ENST00000601291 FAM153CQ494X1 144 aa23.02■■□□□ 1.28
IRF3-228ENST00000601291 BEND6Q5SZJ8 279 aaPredicted RBP23.02■■□□□ 1.28
IRF3-228ENST00000601291 FAM182AQ5T1J6 154 aa23.02■■□□□ 1.28
IRF3-228ENST00000601291 CEP128Q6ZU80 1094 aa23.02■■□□□ 1.28
IRF3-228ENST00000601291 DCAF4L2Q8NA75 395 aa23.02■■□□□ 1.28
IRF3-228ENST00000601291 ATP2A3Q93084 1043 aa23.02■■□□□ 1.28
IRF3-228ENST00000601291 PPP1R2P1Q96PQ5 205 aa23.02■■□□□ 1.28
IRF3-228ENST00000601291 PDFQ9HBH1 243 aa23.02■■□□□ 1.28
IRF3-228ENST00000601291 FAM153AQ9UHL3 310 aa23.02■■□□□ 1.28
IRF3-228ENST00000601291 USP15Q9Y4E8 981 aaPredicted RBP23.02■■□□□ 1.28
IRF3-228ENST00000601291 TTLL3Q9Y4R7 772 aa23.02■■□□□ 1.28
IRF3-228ENST00000601291 NUP205Q92621 2012 aa23.02■■□□□ 1.28
IRF3-228ENST00000601291 APRTP07741 180 aa23.01■■□□□ 1.27
IRF3-228ENST00000601291 MZF1P28698 734 aaPredicted RBP23.01■■□□□ 1.27
IRF3-228ENST00000601291 MAGEA6P43360 314 aa23.01■■□□□ 1.27
IRF3-228ENST00000601291 MMP13P45452 471 aa23.01■■□□□ 1.27
IRF3-228ENST00000601291 PRPSAP1Q14558 356 aa23.01■■□□□ 1.27
IRF3-228ENST00000601291 LBRQ14739 615 aaKnown RBP23.01■■□□□ 1.27
IRF3-228ENST00000601291 PDGFRLQ15198 375 aa23.01■■□□□ 1.27
IRF3-228ENST00000601291 DHCR24Q15392 516 aa23.01■■□□□ 1.27
IRF3-228ENST00000601291 TANGO2Q6ICL3 276 aa23.01■■□□□ 1.27
IRF3-228ENST00000601291 PPP1R21Q6ZMI0 780 aa23.01■■□□□ 1.27
IRF3-228ENST00000601291 YAF2Q8IY57 180 aa23.01■■□□□ 1.27
IRF3-228ENST00000601291 ZCCHC9Q8N567 271 aaKnown RBP23.01■■□□□ 1.27
IRF3-228ENST00000601291 C2orf49Q9BVC5 232 aaPredicted RBP23.01■■□□□ 1.27
IRF3-228ENST00000601291 UBA2Q9UBT2 640 aaPredicted RBP23.01■■□□□ 1.27
IRF3-228ENST00000601291 DENND4AQ7Z401 1863 aa23.01■■□□□ 1.27
IRF3-228ENST00000601291 GOLGA6CA6NDK9 693 aa23.01■■□□□ 1.27
IRF3-228ENST00000601291 GOLGA6BA6NDN3 693 aa23.01■■□□□ 1.27
IRF3-228ENST00000601291 GOLGA6DP0CG33 693 aa23.01■■□□□ 1.27
IRF3-228ENST00000601291 NFKB1P19838 968 aa23.01■■□□□ 1.27
IRF3-228ENST00000601291 TPSB2P20231 275 aa23.01■■□□□ 1.27
IRF3-228ENST00000601291 CD68P34810 354 aaPredicted RBP23.01■■□□□ 1.27
IRF3-228ENST00000601291 GAD2Q05329 585 aa23.01■■□□□ 1.27
IRF3-228ENST00000601291 SLC10A7Q0GE19 358 aa23.01■■□□□ 1.27
IRF3-228ENST00000601291 LMAN2Q12907 356 aa23.01■■□□□ 1.27
IRF3-228ENST00000601291 ZNF235Q14590 738 aa23.01■■□□□ 1.27
IRF3-228ENST00000601291 RFTN1Q14699 578 aaPredicted RBP23.01■■□□□ 1.27
IRF3-228ENST00000601291 TPSAB1Q15661 275 aa23.01■■□□□ 1.27
IRF3-228ENST00000601291 ANKRD22Q5VYY1 191 aa23.01■■□□□ 1.27
IRF3-228ENST00000601291 TEX26Q8N6G2 289 aa23.01■■□□□ 1.27
IRF3-228ENST00000601291 CNTD1Q8N815 330 aa23.01■■□□□ 1.27
IRF3-228ENST00000601291 SUSD6Q92537 303 aa23.01■■□□□ 1.27
IRF3-228ENST00000601291 ELSPBP1Q96BH3 223 aa23.01■■□□□ 1.27
IRF3-228ENST00000601291 SLC2A11Q9BYW1 496 aa23.01■■□□□ 1.27
IRF3-228ENST00000601291 EIF2B3Q9NR50 452 aaKnown RBP23.01■■□□□ 1.27
IRF3-228ENST00000601291 GOLGA6AQ9NYA3 693 aa23.01■■□□□ 1.27
IRF3-228ENST00000601291 OR51B4Q9Y5P0 310 aa23.01■■□□□ 1.27
IRF3-228ENST00000601291 TRIOBPQ9H2D6 2365 aa23■■□□□ 1.27
IRF3-228ENST00000601291 SHROOM3Q8TF72 1996 aa23■■□□□ 1.27
IRF3-228ENST00000601291 CYP17A1P05093 508 aa23■■□□□ 1.27
IRF3-228ENST00000601291 HLA-DQB2P05538 268 aa23■■□□□ 1.27
IRF3-228ENST00000601291 ADH5P11766 374 aa23■■□□□ 1.27
IRF3-228ENST00000601291 NUMBP49757 651 aa23■■□□□ 1.27
IRF3-228ENST00000601291 TNK2Q07912 1038 aa23■■□□□ 1.27
IRF3-228ENST00000601291 SLMAPQ14BN4 828 aa23■■□□□ 1.27
IRF3-228ENST00000601291 TRIM68Q6AZZ1 485 aa23■■□□□ 1.27
IRF3-228ENST00000601291 GPR153Q6NV75 609 aa23■■□□□ 1.27
IRF3-228ENST00000601291 VITQ6UXI7 678 aa23■■□□□ 1.27
IRF3-228ENST00000601291 OTOP3Q7RTS5 596 aa23■■□□□ 1.27
IRF3-228ENST00000601291 MFSD6LQ8IWD5 586 aa23■■□□□ 1.27
IRF3-228ENST00000601291 MYLIPQ8WY64 445 aa23■■□□□ 1.27
IRF3-228ENST00000601291 GDAP1L1Q96MZ0 367 aa23■■□□□ 1.27
IRF3-228ENST00000601291 FRMD8Q9BZ67 464 aaPredicted RBP23■■□□□ 1.27
IRF3-228ENST00000601291 GLOD4Q9HC38 313 aa23■■□□□ 1.27
IRF3-228ENST00000601291 CLEC4EQ9ULY5 219 aa23■■□□□ 1.27
IRF3-228ENST00000601291 F5H423 210 aaPredicted RBP22.99■■□□□ 1.27
IRF3-228ENST00000601291 H3BQ06 376 aaPredicted RBP22.99■■□□□ 1.27
IRF3-228ENST00000601291 TMEM63AO94886 807 aa22.99■■□□□ 1.27
IRF3-228ENST00000601291 GLDCP23378 1020 aa22.99■■□□□ 1.27
IRF3-228ENST00000601291 GEMIN4P57678 1058 aaKnown RBP22.99■■□□□ 1.27
IRF3-228ENST00000601291 SARNPP82979 210 aaKnown RBP22.99■■□□□ 1.27
IRF3-228ENST00000601291 CDK16Q00536 496 aa22.99■■□□□ 1.27
IRF3-228ENST00000601291 FCHO2Q0JRZ9 810 aa22.99■■□□□ 1.27
IRF3-228ENST00000601291 LEKR1Q6ZMV7 388 aa22.99■■□□□ 1.27
IRF3-228ENST00000601291 MTSS1LQ765P7 747 aa22.99■■□□□ 1.27
IRF3-228ENST00000601291 CCDC25Q86WR0 208 aa22.99■■□□□ 1.27
IRF3-228ENST00000601291 ACDQ96AP0 544 aa22.99■■□□□ 1.27
IRF3-228ENST00000601291 ALG14Q96F25 216 aa22.99■■□□□ 1.27
IRF3-228ENST00000601291 ASIC4Q96FT7 647 aa22.99■■□□□ 1.27
IRF3-228ENST00000601291 XPO6Q96QU8 1125 aaKnown RBP22.99■■□□□ 1.27
IRF3-228ENST00000601291 FCRL5Q96RD9 977 aa22.99■■□□□ 1.27
IRF3-228ENST00000601291 NT5MQ9NPB1 228 aa22.99■■□□□ 1.27
IRF3-228ENST00000601291 ABCB8Q9NUT2 735 aa22.99■■□□□ 1.27
IRF3-228ENST00000601291 SEPT3Q9UH03 358 aa22.99■■□□□ 1.27
IRF3-228ENST00000601291 ATP8A1Q9Y2Q0 1164 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms