RNA–Protein interactions for RNA: ENST00000600118.5

CHMP2A-206, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 1,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-206ENST00000600118 MATN3O15232 486 aa12.9□□□□□ -0.34
CHMP2A-206ENST00000600118 ATP9BO43861 1147 aa12.9□□□□□ -0.34
CHMP2A-206ENST00000600118 SLC34A2O95436 690 aa12.9□□□□□ -0.34
CHMP2A-206ENST00000600118 SRCP12931 536 aa12.9□□□□□ -0.34
CHMP2A-206ENST00000600118 VAV1P15498 845 aa12.9□□□□□ -0.34
CHMP2A-206ENST00000600118 STK19P49842 368 aaPredicted RBP12.9□□□□□ -0.34
CHMP2A-206ENST00000600118 SERPINH1P50454 418 aaKnown RBP12.9□□□□□ -0.34
CHMP2A-206ENST00000600118 CLCN6P51797 869 aa12.9□□□□□ -0.34
CHMP2A-206ENST00000600118 GEMIN4P57678 1058 aaKnown RBP12.9□□□□□ -0.34
CHMP2A-206ENST00000600118 EIF3EP60228 445 aaKnown RBP12.9□□□□□ -0.34
CHMP2A-206ENST00000600118 MRPS21P82921 87 aaKnown RBP12.9□□□□□ -0.34
CHMP2A-206ENST00000600118 ZNF234Q14588 700 aa12.9□□□□□ -0.34
CHMP2A-206ENST00000600118 CCNG2Q16589 344 aa12.9□□□□□ -0.34
CHMP2A-206ENST00000600118 CYP1B1Q16678 543 aa12.9□□□□□ -0.34
CHMP2A-206ENST00000600118 INO80DQ53TQ3 878 aaPredicted RBP12.9□□□□□ -0.34
CHMP2A-206ENST00000600118 SLC45A4Q5BKX6 768 aa12.9□□□□□ -0.34
CHMP2A-206ENST00000600118 DGKKQ5KSL6 1271 aa12.9□□□□□ -0.34
CHMP2A-206ENST00000600118 DRICH1Q6PGQ1 229 aaPredicted RBP12.9□□□□□ -0.34
CHMP2A-206ENST00000600118 LINGO4Q6UY18 593 aa12.9□□□□□ -0.34
CHMP2A-206ENST00000600118 ADAT2Q7Z6V5 191 aaKnown RBP12.9□□□□□ -0.34
CHMP2A-206ENST00000600118 ZC3H18Q86VM9 953 aaKnown RBP12.9□□□□□ -0.34
CHMP2A-206ENST00000600118 ZNF354CQ86Y25 554 aa12.9□□□□□ -0.34
CHMP2A-206ENST00000600118 CCDC13Q8IYE1 715 aa12.9□□□□□ -0.34
CHMP2A-206ENST00000600118 SYNPOQ8N3V7 929 aa12.9□□□□□ -0.34
CHMP2A-206ENST00000600118 SH2D3CQ8N5H7 860 aa12.9□□□□□ -0.34
CHMP2A-206ENST00000600118 TEX26Q8N6G2 289 aa12.9□□□□□ -0.34
CHMP2A-206ENST00000600118 KIF18AQ8NI77 898 aa12.9□□□□□ -0.34
CHMP2A-206ENST00000600118 CCDC26Q8TAB7 109 aa12.9□□□□□ -0.34
CHMP2A-206ENST00000600118 LRRN4Q8WUT4 740 aa12.9□□□□□ -0.34
CHMP2A-206ENST00000600118 UCMAQ8WVF2 138 aa12.9□□□□□ -0.34
CHMP2A-206ENST00000600118 TFB1MQ8WVM0 346 aaKnown RBP12.9□□□□□ -0.34
CHMP2A-206ENST00000600118 CASKIN2Q8WXE0 1202 aa12.9□□□□□ -0.34
CHMP2A-206ENST00000600118 ATG4AQ8WYN0 398 aa12.9□□□□□ -0.34
CHMP2A-206ENST00000600118 CLDN23Q96B33 292 aa12.9□□□□□ -0.34
CHMP2A-206ENST00000600118 ZNF419Q96HQ0 510 aaPredicted RBP12.9□□□□□ -0.34
CHMP2A-206ENST00000600118 NAP1L3Q99457 506 aaPredicted RBP12.9□□□□□ -0.34
CHMP2A-206ENST00000600118 FAM118BQ9BPY3 351 aa12.9□□□□□ -0.34
CHMP2A-206ENST00000600118 TMEM245Q9H330 911 aa12.9□□□□□ -0.34
CHMP2A-206ENST00000600118 SP110Q9HB58 689 aa12.9□□□□□ -0.34
CHMP2A-206ENST00000600118 RBM12Q9NTZ6 932 aaKnown RBP12.9□□□□□ -0.34
CHMP2A-206ENST00000600118 SLCO3A1Q9UIG8 710 aa12.9□□□□□ -0.34
CHMP2A-206ENST00000600118 SLC25A13Q9UJS0 675 aa12.9□□□□□ -0.34
CHMP2A-206ENST00000600118 ACTL7AQ9Y615 435 aa12.9□□□□□ -0.34
CHMP2A-206ENST00000600118 VCANP13611 3396 aa12.89□□□□□ -0.35
CHMP2A-206ENST00000600118 BCLAF3A2AJT9 711 aaKnown RBP12.89□□□□□ -0.35
CHMP2A-206ENST00000600118 FAM170BA6NMN3 283 aa12.89□□□□□ -0.35
CHMP2A-206ENST00000600118 K7ERQ8 282 aa12.89□□□□□ -0.35
CHMP2A-206ENST00000600118 MCF2LO15068 1137 aa12.89□□□□□ -0.35
CHMP2A-206ENST00000600118 SMAD6O43541 496 aaKnown RBP12.89□□□□□ -0.35
CHMP2A-206ENST00000600118 LIASO43766 372 aa12.89□□□□□ -0.35
CHMP2A-206ENST00000600118 RNF40O75150 1001 aa12.89□□□□□ -0.35
CHMP2A-206ENST00000600118 ZNF821O75541 412 aaPredicted RBP12.89□□□□□ -0.35
CHMP2A-206ENST00000600118 RBP3P10745 1247 aa12.89□□□□□ -0.35
CHMP2A-206ENST00000600118 IL12RB1P42701 662 aa12.89□□□□□ -0.35
CHMP2A-206ENST00000600118 IFI35P80217 286 aaPredicted RBP12.89□□□□□ -0.35
CHMP2A-206ENST00000600118 HNRNPDQ14103 355 aaKnown RBP12.89□□□□□ -0.35
CHMP2A-206ENST00000600118 LRRC32Q14392 662 aa12.89□□□□□ -0.35
CHMP2A-206ENST00000600118 RFTN1Q14699 578 aaPredicted RBP12.89□□□□□ -0.35
CHMP2A-206ENST00000600118 UBXN2BQ14CS0 331 aa12.89□□□□□ -0.35
CHMP2A-206ENST00000600118 E2F5Q15329 346 aa12.89□□□□□ -0.35
CHMP2A-206ENST00000600118 CYTH1Q15438 398 aa12.89□□□□□ -0.35
CHMP2A-206ENST00000600118 OASLQ15646 514 aaKnown RBP12.89□□□□□ -0.35
CHMP2A-206ENST00000600118 TMCO4Q5TGY1 634 aa12.89□□□□□ -0.35
CHMP2A-206ENST00000600118 CWF19L1Q69YN2 538 aaKnown RBP12.89□□□□□ -0.35
CHMP2A-206ENST00000600118 TIGD7Q6NT04 549 aaPredicted RBP12.89□□□□□ -0.35
CHMP2A-206ENST00000600118 LEKR1Q6ZMV7 388 aa12.89□□□□□ -0.35
CHMP2A-206ENST00000600118 B4GALNT4Q76KP1 1039 aa12.89□□□□□ -0.35
CHMP2A-206ENST00000600118 CCDC105Q8IYK2 499 aa12.89□□□□□ -0.35
CHMP2A-206ENST00000600118 ZNF513Q8N8E2 541 aaPredicted RBP12.89□□□□□ -0.35
CHMP2A-206ENST00000600118 C12orf50Q8NA57 414 aaPredicted RBP12.89□□□□□ -0.35
CHMP2A-206ENST00000600118 CCNYQ8ND76 341 aa12.89□□□□□ -0.35
CHMP2A-206ENST00000600118 PJA1Q8NG27 643 aa12.89□□□□□ -0.35
CHMP2A-206ENST00000600118 FRS2Q8WU20 508 aa12.89□□□□□ -0.35
CHMP2A-206ENST00000600118 C1orf54Q8WWF1 131 aa12.89□□□□□ -0.35
CHMP2A-206ENST00000600118 ZNF592Q92610 1267 aa12.89□□□□□ -0.35
CHMP2A-206ENST00000600118 CAPZA3Q96KX2 299 aa12.89□□□□□ -0.35
CHMP2A-206ENST00000600118 RPL10LQ96L21 214 aaKnown RBP12.89□□□□□ -0.35
CHMP2A-206ENST00000600118 ACOX2Q99424 681 aa12.89□□□□□ -0.35
CHMP2A-206ENST00000600118 GABRG3Q99928 467 aa12.89□□□□□ -0.35
CHMP2A-206ENST00000600118 LMAN1LQ9HAT1 526 aa12.89□□□□□ -0.35
CHMP2A-206ENST00000600118 UBA2Q9UBT2 640 aaPredicted RBP12.89□□□□□ -0.35
CHMP2A-206ENST00000600118 CDC23Q9UJX2 597 aa12.89□□□□□ -0.35
CHMP2A-206ENST00000600118 DNPEPQ9ULA0 475 aa12.89□□□□□ -0.35
CHMP2A-206ENST00000600118 PLA2G4CQ9UP65 541 aa12.89□□□□□ -0.35
CHMP2A-206ENST00000600118 TMEM221A6NGB7 291 aa12.88□□□□□ -0.35
CHMP2A-206ENST00000600118 TTC34A8MYJ7 566 aa12.88□□□□□ -0.35
CHMP2A-206ENST00000600118 CHURC1-FNTBB4DL54 471 aa12.88□□□□□ -0.35
CHMP2A-206ENST00000600118 H7C0C1 242 aa12.88□□□□□ -0.35
CHMP2A-206ENST00000600118 M0R296 226 aa12.88□□□□□ -0.35
CHMP2A-206ENST00000600118 KCNK1O00180 336 aa12.88□□□□□ -0.35
CHMP2A-206ENST00000600118 TMCC1O94876 653 aa12.88□□□□□ -0.35
CHMP2A-206ENST00000600118 PDGFBP01127 241 aaPredicted RBP12.88□□□□□ -0.35
CHMP2A-206ENST00000600118 PRKCHP24723 683 aa12.88□□□□□ -0.35
CHMP2A-206ENST00000600118 TIE1P35590 1138 aa12.88□□□□□ -0.35
CHMP2A-206ENST00000600118 ATP5OP48047 213 aa12.88□□□□□ -0.35
CHMP2A-206ENST00000600118 SEC13P55735 322 aa12.88□□□□□ -0.35
CHMP2A-206ENST00000600118 SLC10A7Q0GE19 358 aa12.88□□□□□ -0.35
CHMP2A-206ENST00000600118 WASHC5Q12768 1159 aa12.88□□□□□ -0.35
CHMP2A-206ENST00000600118 HNRNPA1L2Q32P51 320 aaKnown RBP12.88□□□□□ -0.35
CHMP2A-206ENST00000600118 HSF5Q4G112 596 aaPredicted RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms