RNA–Protein interactions for RNA: ENST00000599165.5

LIG1-217, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-217ENST00000599165 A0A1B0GVT2 93 aa12.43□□□□□ -0.42
LIG1-217ENST00000599165 TMCO5BA8MYB1 307 aa12.43□□□□□ -0.42
LIG1-217ENST00000599165 RTN2O75298 545 aa12.43□□□□□ -0.42
LIG1-217ENST00000599165 RNASEH2AO75792 299 aaKnown RBP12.43□□□□□ -0.42
LIG1-217ENST00000599165 FSBPO95073 299 aa12.43□□□□□ -0.42
LIG1-217ENST00000599165 ADH1BP00325 375 aa12.43□□□□□ -0.42
LIG1-217ENST00000599165 IL1BP01584 269 aa12.43□□□□□ -0.42
LIG1-217ENST00000599165 WNT1P04628 370 aa12.43□□□□□ -0.42
LIG1-217ENST00000599165 PLEKP08567 350 aaPredicted RBP12.43□□□□□ -0.42
LIG1-217ENST00000599165 SKILP12757 684 aa12.43□□□□□ -0.42
LIG1-217ENST00000599165 GNSP15586 552 aa12.43□□□□□ -0.42
LIG1-217ENST00000599165 RHOQP17081 205 aa12.43□□□□□ -0.42
LIG1-217ENST00000599165 TNFAIP3P21580 790 aa12.43□□□□□ -0.42
LIG1-217ENST00000599165 KCNA4P22459 653 aa12.43□□□□□ -0.42
LIG1-217ENST00000599165 CD27P26842 260 aa12.43□□□□□ -0.42
LIG1-217ENST00000599165 NNMTP40261 264 aa12.43□□□□□ -0.42
LIG1-217ENST00000599165 CSNK1EP49674 416 aaKnown RBP12.43□□□□□ -0.42
LIG1-217ENST00000599165 GNA12Q03113 381 aa12.43□□□□□ -0.42
LIG1-217ENST00000599165 ASIC2Q16515 512 aa12.43□□□□□ -0.42
LIG1-217ENST00000599165 POM121L1PQ3SYA9 428 aa12.43□□□□□ -0.42
LIG1-217ENST00000599165 FILIP1LQ4L180 1135 aa12.43□□□□□ -0.42
LIG1-217ENST00000599165 C22orf39Q6P5X5 142 aa12.43□□□□□ -0.42
LIG1-217ENST00000599165 ZNF783Q6ZMS7 281 aa12.43□□□□□ -0.42
LIG1-217ENST00000599165 DRC7Q8IY82 874 aa12.43□□□□□ -0.42
LIG1-217ENST00000599165 PIP4K2CQ8TBX8 421 aa12.43□□□□□ -0.42
LIG1-217ENST00000599165 ARRDC3Q96B67 414 aa12.43□□□□□ -0.42
LIG1-217ENST00000599165 PEBP4Q96S96 227 aa12.43□□□□□ -0.42
LIG1-217ENST00000599165 CNPY3Q9BT09 278 aa12.43□□□□□ -0.42
LIG1-217ENST00000599165 C2orf49Q9BVC5 232 aaPredicted RBP12.43□□□□□ -0.42
LIG1-217ENST00000599165 EDEM3Q9BZQ6 932 aa12.43□□□□□ -0.42
LIG1-217ENST00000599165 FZD10Q9ULW2 581 aa12.43□□□□□ -0.42
LIG1-217ENST00000599165 FNDC3AQ9Y2H6 1198 aaKnown RBP12.43□□□□□ -0.42
LIG1-217ENST00000599165 A0A1W2PPC4 97 aa12.42□□□□□ -0.42
LIG1-217ENST00000599165 FAM47DPA6NHR8 397 aa12.42□□□□□ -0.42
LIG1-217ENST00000599165 ALOX15BO15296 676 aa12.42□□□□□ -0.42
LIG1-217ENST00000599165 LATO43561 262 aa12.42□□□□□ -0.42
LIG1-217ENST00000599165 RNASEH1O60930 286 aaKnown RBP12.42□□□□□ -0.42
LIG1-217ENST00000599165 TOP3BO95985 862 aaKnown RBP12.42□□□□□ -0.42
LIG1-217ENST00000599165 SERPINC1P01008 464 aa12.42□□□□□ -0.42
LIG1-217ENST00000599165 SYPP08247 313 aa12.42□□□□□ -0.42
LIG1-217ENST00000599165 L1CAMP32004 1257 aa12.42□□□□□ -0.42
LIG1-217ENST00000599165 SERPINH1P50454 418 aaKnown RBP12.42□□□□□ -0.42
LIG1-217ENST00000599165 KRT83P78385 493 aa12.42□□□□□ -0.42
LIG1-217ENST00000599165 CNTN1Q12860 1018 aa12.42□□□□□ -0.42
LIG1-217ENST00000599165 CA9Q16790 459 aa12.42□□□□□ -0.42
LIG1-217ENST00000599165 KIF19Q2TAC6 998 aa12.42□□□□□ -0.42
LIG1-217ENST00000599165 ACCSLQ4AC99 568 aa12.42□□□□□ -0.42
LIG1-217ENST00000599165 PIP5KL1Q5T9C9 394 aa12.42□□□□□ -0.42
LIG1-217ENST00000599165 SFMBT2Q5VUG0 894 aa12.42□□□□□ -0.42
LIG1-217ENST00000599165 ATP11CQ8NB49 1132 aa12.42□□□□□ -0.42
LIG1-217ENST00000599165 OR2T34Q8NGX1 318 aa12.42□□□□□ -0.42
LIG1-217ENST00000599165 GANCQ8TET4 914 aa12.42□□□□□ -0.42
LIG1-217ENST00000599165 OR8D1Q8WZ84 308 aa12.42□□□□□ -0.42
LIG1-217ENST00000599165 SNX19Q92543 992 aa12.42□□□□□ -0.42
LIG1-217ENST00000599165 ARHGEF2Q92974 986 aaKnown RBP12.42□□□□□ -0.42
LIG1-217ENST00000599165 VCPIP1Q96JH7 1222 aa12.42□□□□□ -0.42
LIG1-217ENST00000599165 SLC6A18Q96N87 628 aa12.42□□□□□ -0.42
LIG1-217ENST00000599165 CAMK1GQ96NX5 476 aa12.42□□□□□ -0.42
LIG1-217ENST00000599165 PPP1R9BQ96SB3 815 aa12.42□□□□□ -0.42
LIG1-217ENST00000599165 OMDQ99983 421 aa12.42□□□□□ -0.42
LIG1-217ENST00000599165 KLC2Q9H0B6 622 aa12.42□□□□□ -0.42
LIG1-217ENST00000599165 TNKS2Q9H2K2 1166 aa12.42□□□□□ -0.42
LIG1-217ENST00000599165 ATP13A1Q9HD20 1204 aa12.42□□□□□ -0.42
LIG1-217ENST00000599165 ARHGAP20Q9P2F6 1191 aa12.42□□□□□ -0.42
LIG1-217ENST00000599165 DNAI1Q9UI46 699 aa12.42□□□□□ -0.42
LIG1-217ENST00000599165 NCKAP1Q9Y2A7 1128 aa12.42□□□□□ -0.42
LIG1-217ENST00000599165 SNX11Q9Y5W9 270 aa12.42□□□□□ -0.42
LIG1-217ENST00000599165 WASF2Q9Y6W5 498 aa12.42□□□□□ -0.42
LIG1-217ENST00000599165 TRPM6Q9BX84 2022 aa12.42□□□□□ -0.42
LIG1-217ENST00000599165 A0A1W2PQJ5 194 aa12.41□□□□□ -0.42
LIG1-217ENST00000599165 A0A1W2PR77 199 aa12.41□□□□□ -0.42
LIG1-217ENST00000599165 TMEM191CA6NGB0 347 aa12.41□□□□□ -0.42
LIG1-217ENST00000599165 CBX4O00257 560 aa12.41□□□□□ -0.42
LIG1-217ENST00000599165 PLRG1O43660 514 aaKnown RBP12.41□□□□□ -0.42
LIG1-217ENST00000599165 OPHN1O60890 802 aa12.41□□□□□ -0.42
LIG1-217ENST00000599165 CBFA2T3O75081 653 aa12.41□□□□□ -0.42
LIG1-217ENST00000599165 CCDC172P0C7W6 258 aa12.41□□□□□ -0.42
LIG1-217ENST00000599165 GZMAP12544 262 aa12.41□□□□□ -0.42
LIG1-217ENST00000599165 CEACAM1P13688 526 aa12.41□□□□□ -0.42
LIG1-217ENST00000599165 CHRNA3P32297 505 aa12.41□□□□□ -0.42
LIG1-217ENST00000599165 GRIA4P48058 902 aa12.41□□□□□ -0.42
LIG1-217ENST00000599165 MAPKAPK2P49137 400 aa12.41□□□□□ -0.42
LIG1-217ENST00000599165 CCR5P51681 352 aa12.41□□□□□ -0.42
LIG1-217ENST00000599165 CLCN6P51797 869 aa12.41□□□□□ -0.42
LIG1-217ENST00000599165 HLA-BQ31612 363 aa12.41□□□□□ -0.42
LIG1-217ENST00000599165 ARL13BQ3SXY8 428 aa12.41□□□□□ -0.42
LIG1-217ENST00000599165 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.41□□□□□ -0.42
LIG1-217ENST00000599165 DBX2Q6ZNG2 339 aa12.41□□□□□ -0.42
LIG1-217ENST00000599165 DPY19L3Q6ZPD9 716 aa12.41□□□□□ -0.42
LIG1-217ENST00000599165 TMC6Q7Z403 805 aa12.41□□□□□ -0.42
LIG1-217ENST00000599165 SLFN11Q7Z7L1 901 aa12.41□□□□□ -0.42
LIG1-217ENST00000599165 OR14C36Q8NHC7 312 aa12.41□□□□□ -0.42
LIG1-217ENST00000599165 TBC1D31Q96DN5 1066 aa12.41□□□□□ -0.42
LIG1-217ENST00000599165 SPON2Q9BUD6 331 aa12.41□□□□□ -0.42
LIG1-217ENST00000599165 ZDHHC5Q9C0B5 715 aa12.41□□□□□ -0.42
LIG1-217ENST00000599165 ISCUQ9H1K1 167 aa12.41□□□□□ -0.42
LIG1-217ENST00000599165 GPATCH2LQ9NWQ4 482 aa12.41□□□□□ -0.42
LIG1-217ENST00000599165 NENFQ9UMX5 172 aa12.41□□□□□ -0.42
LIG1-217ENST00000599165 USP24Q9UPU5 2620 aa12.41□□□□□ -0.42
LIG1-217ENST00000599165 FCF1Q9Y324 198 aaKnown RBP12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms