RNA–Protein interactions for RNA: ENST00000598359.5

SCAF1-203, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-203ENST00000598359 PLXNA2O75051 1894 aa14.1□□□□□ -0.15
SCAF1-203ENST00000598359 AKAP13Q12802 2813 aa14.1□□□□□ -0.15
SCAF1-203ENST00000598359 GCN1Q92616 2671 aaKnown RBP14.09□□□□□ -0.15
SCAF1-203ENST00000598359 LRRC72A6NJI9 287 aa14.09□□□□□ -0.15
SCAF1-203ENST00000598359 HYAL3O43820 417 aaPredicted RBP14.09□□□□□ -0.15
SCAF1-203ENST00000598359 CTSLP07711 333 aa14.09□□□□□ -0.15
SCAF1-203ENST00000598359 CDC25BP30305 580 aa14.09□□□□□ -0.15
SCAF1-203ENST00000598359 KRT83P78385 493 aa14.09□□□□□ -0.15
SCAF1-203ENST00000598359 IL9RQ01113 521 aa14.09□□□□□ -0.15
SCAF1-203ENST00000598359 CNTN1Q12860 1018 aa14.09□□□□□ -0.15
SCAF1-203ENST00000598359 PRAMEF14Q5SWL7 426 aa14.09□□□□□ -0.15
SCAF1-203ENST00000598359 WDR59Q6PJI9 974 aa14.09□□□□□ -0.15
SCAF1-203ENST00000598359 ARCQ7LC44 396 aa14.09□□□□□ -0.15
SCAF1-203ENST00000598359 ADAT2Q7Z6V5 191 aaKnown RBP14.09□□□□□ -0.15
SCAF1-203ENST00000598359 DNAAF5Q86Y56 855 aa14.09□□□□□ -0.15
SCAF1-203ENST00000598359 CCDC185Q8N715 623 aa14.09□□□□□ -0.15
SCAF1-203ENST00000598359 CHST14Q8NCH0 376 aa14.09□□□□□ -0.15
SCAF1-203ENST00000598359 PIP4K2CQ8TBX8 421 aa14.09□□□□□ -0.15
SCAF1-203ENST00000598359 SETD7Q8WTS6 366 aaKnown RBP14.09□□□□□ -0.15
SCAF1-203ENST00000598359 FAM172AQ8WUF8 416 aa14.09□□□□□ -0.15
SCAF1-203ENST00000598359 C2orf49Q9BVC5 232 aaPredicted RBP14.09□□□□□ -0.15
SCAF1-203ENST00000598359 ZYG11BQ9C0D3 744 aa14.09□□□□□ -0.15
SCAF1-203ENST00000598359 TNKS2Q9H2K2 1166 aa14.09□□□□□ -0.15
SCAF1-203ENST00000598359 RRAGDQ9NQL2 400 aaPredicted RBP14.09□□□□□ -0.15
SCAF1-203ENST00000598359 TM7SF3Q9NS93 570 aa14.09□□□□□ -0.15
SCAF1-203ENST00000598359 NDFIP2Q9NV92 336 aa14.09□□□□□ -0.15
SCAF1-203ENST00000598359 FZD4Q9ULV1 537 aa14.09□□□□□ -0.15
SCAF1-203ENST00000598359 DAAM1Q9Y4D1 1078 aa14.09□□□□□ -0.15
SCAF1-203ENST00000598359 TBC1D3DA0A087WVF3 549 aa14.08□□□□□ -0.16
SCAF1-203ENST00000598359 TBC1D3IA0A087WXS9 549 aa14.08□□□□□ -0.16
SCAF1-203ENST00000598359 TBC1D3EA0A087X179 549 aa14.08□□□□□ -0.16
SCAF1-203ENST00000598359 TBC1D3KA0A087X1G2 549 aa14.08□□□□□ -0.16
SCAF1-203ENST00000598359 A0A1W2PPC4 97 aa14.08□□□□□ -0.16
SCAF1-203ENST00000598359 TBC1D3FA6NER0 549 aaPredicted RBP14.08□□□□□ -0.16
SCAF1-203ENST00000598359 TBC1D3LB9A6J9 549 aa14.08□□□□□ -0.16
SCAF1-203ENST00000598359 H0Y8X5 98 aa14.08□□□□□ -0.16
SCAF1-203ENST00000598359 CBX4O00257 560 aa14.08□□□□□ -0.16
SCAF1-203ENST00000598359 CER1O95813 267 aa14.08□□□□□ -0.16
SCAF1-203ENST00000598359 WNT1P04628 370 aa14.08□□□□□ -0.16
SCAF1-203ENST00000598359 TBC1D3HP0C7X1 549 aa14.08□□□□□ -0.16
SCAF1-203ENST00000598359 KRT3P12035 628 aa14.08□□□□□ -0.16
SCAF1-203ENST00000598359 MAT2AP31153 395 aaKnown RBP14.08□□□□□ -0.16
SCAF1-203ENST00000598359 ADRA1BP35368 520 aa14.08□□□□□ -0.16
SCAF1-203ENST00000598359 GRIA4P48058 902 aa14.08□□□□□ -0.16
SCAF1-203ENST00000598359 VASPP50552 380 aaPredicted RBP14.08□□□□□ -0.16
SCAF1-203ENST00000598359 HDAC4P56524 1084 aa14.08□□□□□ -0.16
SCAF1-203ENST00000598359 SFSWAPQ12872 951 aaKnown RBP14.08□□□□□ -0.16
SCAF1-203ENST00000598359 SLC14A1Q13336 389 aa14.08□□□□□ -0.16
SCAF1-203ENST00000598359 TEAD4Q15561 434 aa14.08□□□□□ -0.16
SCAF1-203ENST00000598359 C6orf118Q5T5N4 469 aa14.08□□□□□ -0.16
SCAF1-203ENST00000598359 TBC1D3GQ6DHY5 549 aa14.08□□□□□ -0.16
SCAF1-203ENST00000598359 TBC1D3CQ6IPX1 549 aa14.08□□□□□ -0.16
SCAF1-203ENST00000598359 RWDD4Q6NW29 188 aaKnown RBP14.08□□□□□ -0.16
SCAF1-203ENST00000598359 MON1BQ7L1V2 547 aa14.08□□□□□ -0.16
SCAF1-203ENST00000598359 SETD3Q86TU7 594 aaPredicted RBP14.08□□□□□ -0.16
SCAF1-203ENST00000598359 PHF13Q86YI8 300 aaPredicted RBP14.08□□□□□ -0.16
SCAF1-203ENST00000598359 TBC1D3Q8IZP1 549 aaPredicted RBP14.08□□□□□ -0.16
SCAF1-203ENST00000598359 DCAF4L2Q8NA75 395 aa14.08□□□□□ -0.16
SCAF1-203ENST00000598359 OR2A12Q8NGT7 310 aa14.08□□□□□ -0.16
SCAF1-203ENST00000598359 SELENOOQ9BVL4 669 aa14.08□□□□□ -0.16
SCAF1-203ENST00000598359 SCNM1Q9BWG6 230 aa14.08□□□□□ -0.16
SCAF1-203ENST00000598359 RTN4Q9NQC3 1192 aaKnown RBP14.08□□□□□ -0.16
SCAF1-203ENST00000598359 AASDHPPTQ9NRN7 309 aa14.08□□□□□ -0.16
SCAF1-203ENST00000598359 TAS2R14Q9NYV8 317 aa14.08□□□□□ -0.16
SCAF1-203ENST00000598359 OR12D3Q9UGF7 316 aa14.08□□□□□ -0.16
SCAF1-203ENST00000598359 PPM1HQ9ULR3 514 aa14.08□□□□□ -0.16
SCAF1-203ENST00000598359 HS3ST2Q9Y278 367 aa14.08□□□□□ -0.16
SCAF1-203ENST00000598359 BTBD3Q9Y2F9 522 aa14.08□□□□□ -0.16
SCAF1-203ENST00000598359 ZKSCAN5Q9Y2L8 839 aa14.08□□□□□ -0.16
SCAF1-203ENST00000598359 TMCO5BA8MYB1 307 aa14.07□□□□□ -0.16
SCAF1-203ENST00000598359 C10orf142B7Z368 130 aa14.07□□□□□ -0.16
SCAF1-203ENST00000598359 GOLGA6L19H0YKK7 550 aa14.07□□□□□ -0.16
SCAF1-203ENST00000598359 MCF2LO15068 1137 aa14.07□□□□□ -0.16
SCAF1-203ENST00000598359 CALB1P05937 261 aa14.07□□□□□ -0.16
SCAF1-203ENST00000598359 TPM3P06753 285 aa14.07□□□□□ -0.16
SCAF1-203ENST00000598359 GPD1P21695 349 aa14.07□□□□□ -0.16
SCAF1-203ENST00000598359 ACVRL1P37023 503 aa14.07□□□□□ -0.16
SCAF1-203ENST00000598359 CTSKP43235 329 aa14.07□□□□□ -0.16
SCAF1-203ENST00000598359 PTPN9P43378 593 aa14.07□□□□□ -0.16
SCAF1-203ENST00000598359 TRIP6Q15654 476 aaKnown RBP14.07□□□□□ -0.16
SCAF1-203ENST00000598359 MANEALQ5VSG8 457 aa14.07□□□□□ -0.16
SCAF1-203ENST00000598359 AGBL4Q5VU57 503 aa14.07□□□□□ -0.16
SCAF1-203ENST00000598359 DNAJC24Q6P3W2 148 aa14.07□□□□□ -0.16
SCAF1-203ENST00000598359 IL27RAQ6UWB1 636 aa14.07□□□□□ -0.16
SCAF1-203ENST00000598359 LEKR1Q6ZMV7 388 aa14.07□□□□□ -0.16
SCAF1-203ENST00000598359 IRF2BP2Q7Z5L9 587 aa14.07□□□□□ -0.16
SCAF1-203ENST00000598359 DSG4Q86SJ6 1040 aa14.07□□□□□ -0.16
SCAF1-203ENST00000598359 PYROXD2Q8N2H3 581 aa14.07□□□□□ -0.16
SCAF1-203ENST00000598359 PNPLA1Q8N8W4 532 aa14.07□□□□□ -0.16
SCAF1-203ENST00000598359 C3orf20Q8ND61 904 aa14.07□□□□□ -0.16
SCAF1-203ENST00000598359 GRIN3AQ8TCU5 1115 aa14.07□□□□□ -0.16
SCAF1-203ENST00000598359 BAP1Q92560 729 aa14.07□□□□□ -0.16
SCAF1-203ENST00000598359 CENPIQ92674 756 aaPredicted RBP14.07□□□□□ -0.16
SCAF1-203ENST00000598359 NAP1L5Q96NT1 182 aaPredicted RBP14.07□□□□□ -0.16
SCAF1-203ENST00000598359 MCEEQ96PE7 176 aa14.07□□□□□ -0.16
SCAF1-203ENST00000598359 ATP13A1Q9HD20 1204 aa14.07□□□□□ -0.16
SCAF1-203ENST00000598359 OSGEPQ9NPF4 335 aa14.07□□□□□ -0.16
SCAF1-203ENST00000598359 DNAI1Q9UI46 699 aa14.07□□□□□ -0.16
SCAF1-203ENST00000598359 KLK13Q9UKR3 277 aa14.07□□□□□ -0.16
SCAF1-203ENST00000598359 PCOLCE2Q9UKZ9 415 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms