RNA–Protein interactions for RNA: ENST00000597901.1

LIG1-215, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-215ENST00000597901 C1QTNF3-AMACRE9PGA6 284 aa15.42■□□□□ 0.06
LIG1-215ENST00000597901 CBX4O00257 560 aa15.42■□□□□ 0.06
LIG1-215ENST00000597901 WNT9AO14904 365 aa15.42■□□□□ 0.06
LIG1-215ENST00000597901 VILLO15195 856 aa15.42■□□□□ 0.06
LIG1-215ENST00000597901 SLC7A4O43246 635 aa15.42■□□□□ 0.06
LIG1-215ENST00000597901 RTN2O75298 545 aa15.42■□□□□ 0.06
LIG1-215ENST00000597901 PLEKP08567 350 aaPredicted RBP15.42■□□□□ 0.06
LIG1-215ENST00000597901 SPINK2P20155 84 aa15.42■□□□□ 0.06
LIG1-215ENST00000597901 RRM1P23921 792 aa15.42■□□□□ 0.06
LIG1-215ENST00000597901 CHRNA3P32297 505 aa15.42■□□□□ 0.06
LIG1-215ENST00000597901 PI4KAP42356 2102 aa15.42■□□□□ 0.06
LIG1-215ENST00000597901 CTSKP43235 329 aa15.42■□□□□ 0.06
LIG1-215ENST00000597901 CLCN6P51797 869 aa15.42■□□□□ 0.06
LIG1-215ENST00000597901 GNA12Q03113 381 aa15.42■□□□□ 0.06
LIG1-215ENST00000597901 CNTN1Q12860 1018 aa15.42■□□□□ 0.06
LIG1-215ENST00000597901 SUZ12Q15022 739 aaKnown RBP15.42■□□□□ 0.06
LIG1-215ENST00000597901 IQCB1Q15051 598 aa15.42■□□□□ 0.06
LIG1-215ENST00000597901 POM121L1PQ3SYA9 428 aa15.42■□□□□ 0.06
LIG1-215ENST00000597901 RETSATQ6NUM9 610 aa15.42■□□□□ 0.06
LIG1-215ENST00000597901 LAYNQ6UX15 382 aa15.42■□□□□ 0.06
LIG1-215ENST00000597901 ADAT2Q7Z6V5 191 aaKnown RBP15.42■□□□□ 0.06
LIG1-215ENST00000597901 NAXDQ8IW45 347 aa15.42■□□□□ 0.06
LIG1-215ENST00000597901 DRC7Q8IY82 874 aa15.42■□□□□ 0.06
LIG1-215ENST00000597901 MCOLN2Q8IZK6 566 aa15.42■□□□□ 0.06
LIG1-215ENST00000597901 CCDC185Q8N715 623 aa15.42■□□□□ 0.06
LIG1-215ENST00000597901 TMIEQ8NEW7 156 aa15.42■□□□□ 0.06
LIG1-215ENST00000597901 SETD7Q8WTS6 366 aaKnown RBP15.42■□□□□ 0.06
LIG1-215ENST00000597901 SLC6A18Q96N87 628 aa15.42■□□□□ 0.06
LIG1-215ENST00000597901 SYT11Q9BT88 431 aa15.42■□□□□ 0.06
LIG1-215ENST00000597901 FUCA2Q9BTY2 467 aa15.42■□□□□ 0.06
LIG1-215ENST00000597901 ACE2Q9BYF1 805 aaPredicted RBP15.42■□□□□ 0.06
LIG1-215ENST00000597901 KDM4CQ9H3R0 1056 aa15.42■□□□□ 0.06
LIG1-215ENST00000597901 RETREG1Q9H6L5 497 aa15.42■□□□□ 0.06
LIG1-215ENST00000597901 PCDHGB2Q9Y5G2 931 aa15.42■□□□□ 0.06
LIG1-215ENST00000597901 CBFA2T3O75081 653 aa15.41■□□□□ 0.06
LIG1-215ENST00000597901 ZNF821O75541 412 aaPredicted RBP15.41■□□□□ 0.06
LIG1-215ENST00000597901 WNT1P04628 370 aa15.41■□□□□ 0.06
LIG1-215ENST00000597901 CTSLP07711 333 aa15.41■□□□□ 0.06
LIG1-215ENST00000597901 RHOQP17081 205 aa15.41■□□□□ 0.06
LIG1-215ENST00000597901 ZNF143P52747 638 aaPredicted RBP15.41■□□□□ 0.06
LIG1-215ENST00000597901 C21orf59P57076 290 aa15.41■□□□□ 0.06
LIG1-215ENST00000597901 RPL7AP62424 266 aaKnown RBP15.41■□□□□ 0.06
LIG1-215ENST00000597901 NR1I3Q14994 352 aa15.41■□□□□ 0.06
LIG1-215ENST00000597901 PPP1R15BQ5SWA1 713 aa15.41■□□□□ 0.06
LIG1-215ENST00000597901 MANEALQ5VSG8 457 aa15.41■□□□□ 0.06
LIG1-215ENST00000597901 RWDD4Q6NW29 188 aaKnown RBP15.41■□□□□ 0.06
LIG1-215ENST00000597901 SCYL2Q6P3W7 929 aa15.41■□□□□ 0.06
LIG1-215ENST00000597901 SLFN11Q7Z7L1 901 aa15.41■□□□□ 0.06
LIG1-215ENST00000597901 PRPF39Q86UA1 669 aaKnown RBP15.41■□□□□ 0.06
LIG1-215ENST00000597901 NLRP14Q86W24 1093 aa15.41■□□□□ 0.06
LIG1-215ENST00000597901 CHST14Q8NCH0 376 aa15.41■□□□□ 0.06
LIG1-215ENST00000597901 NTAN1Q96AB6 310 aa15.41■□□□□ 0.06
LIG1-215ENST00000597901 SKA1Q96BD8 255 aa15.41■□□□□ 0.06
LIG1-215ENST00000597901 CCDC114Q96M63 670 aa15.41■□□□□ 0.06
LIG1-215ENST00000597901 TNKS2Q9H2K2 1166 aa15.41■□□□□ 0.06
LIG1-215ENST00000597901 ATP13A1Q9HD20 1204 aa15.41■□□□□ 0.06
LIG1-215ENST00000597901 NDFIP2Q9NV92 336 aa15.41■□□□□ 0.06
LIG1-215ENST00000597901 ARHGAP20Q9P2F6 1191 aa15.41■□□□□ 0.06
LIG1-215ENST00000597901 PCOLCE2Q9UKZ9 415 aa15.41■□□□□ 0.06
LIG1-215ENST00000597901 TPX2Q9ULW0 747 aaKnown RBP15.41■□□□□ 0.06
LIG1-215ENST00000597901 ASCC3Q8N3C0 2202 aaKnown RBP15.4■□□□□ 0.06
LIG1-215ENST00000597901 A0A1W2PQC6 194 aa15.4■□□□□ 0.06
LIG1-215ENST00000597901 A0A1W2PR77 199 aa15.4■□□□□ 0.06
LIG1-215ENST00000597901 H0Y8X5 98 aa15.4■□□□□ 0.06
LIG1-215ENST00000597901 LATO43561 262 aa15.4■□□□□ 0.06
LIG1-215ENST00000597901 PLRG1O43660 514 aaKnown RBP15.4■□□□□ 0.06
LIG1-215ENST00000597901 KRT37O76014 449 aa15.4■□□□□ 0.06
LIG1-215ENST00000597901 LRIG2O94898 1065 aa15.4■□□□□ 0.06
LIG1-215ENST00000597901 CD38P28907 300 aa15.4■□□□□ 0.06
LIG1-215ENST00000597901 ACVRL1P37023 503 aa15.4■□□□□ 0.06
LIG1-215ENST00000597901 PPP2CBP62714 309 aa15.4■□□□□ 0.06
LIG1-215ENST00000597901 PPP2CAP67775 309 aa15.4■□□□□ 0.06
LIG1-215ENST00000597901 ARF5P84085 180 aa15.4■□□□□ 0.06
LIG1-215ENST00000597901 ZNF423Q2M1K9 1284 aa15.4■□□□□ 0.06
LIG1-215ENST00000597901 ARSIQ5FYB1 569 aa15.4■□□□□ 0.06
LIG1-215ENST00000597901 PRAMEF14Q5SWL7 426 aa15.4■□□□□ 0.06
LIG1-215ENST00000597901 AGBL4Q5VU57 503 aa15.4■□□□□ 0.06
LIG1-215ENST00000597901 DNAJC24Q6P3W2 148 aa15.4■□□□□ 0.06
LIG1-215ENST00000597901 DPY19L3Q6ZPD9 716 aa15.4■□□□□ 0.06
LIG1-215ENST00000597901 RHBDD1Q8TEB9 315 aa15.4■□□□□ 0.06
LIG1-215ENST00000597901 VCPIP1Q96JH7 1222 aa15.4■□□□□ 0.06
LIG1-215ENST00000597901 SERAC1Q96JX3 654 aa15.4■□□□□ 0.06
LIG1-215ENST00000597901 SCNM1Q9BWG6 230 aa15.4■□□□□ 0.06
LIG1-215ENST00000597901 AASDHPPTQ9NRN7 309 aa15.4■□□□□ 0.06
LIG1-215ENST00000597901 TMEM248Q9NWD8 314 aa15.4■□□□□ 0.06
LIG1-215ENST00000597901 TAS2R14Q9NYV8 317 aa15.4■□□□□ 0.06
LIG1-215ENST00000597901 AIPL1Q9NZN9 384 aa15.4■□□□□ 0.06
LIG1-215ENST00000597901 DNAI1Q9UI46 699 aa15.4■□□□□ 0.06
LIG1-215ENST00000597901 NUMA1Q14980 2115 aa15.4■□□□□ 0.06
LIG1-215ENST00000597901 ADAMTS9Q9P2N4 1935 aa15.39■□□□□ 0.05
LIG1-215ENST00000597901 A0A1B0GTH6 734 aa15.39■□□□□ 0.05
LIG1-215ENST00000597901 ANKRD62A6NC57 917 aa15.39■□□□□ 0.05
LIG1-215ENST00000597901 LRRC53A6NM62 1247 aa15.39■□□□□ 0.05
LIG1-215ENST00000597901 TMCO5BA8MYB1 307 aa15.39■□□□□ 0.05
LIG1-215ENST00000597901 RNF103O00237 685 aa15.39■□□□□ 0.05
LIG1-215ENST00000597901 KPNA3O00505 521 aaPredicted RBP15.39■□□□□ 0.05
LIG1-215ENST00000597901 CCP110O43303 1012 aa15.39■□□□□ 0.05
LIG1-215ENST00000597901 HYAL3O43820 417 aaPredicted RBP15.39■□□□□ 0.05
LIG1-215ENST00000597901 DFNA5O60443 496 aa15.39■□□□□ 0.05
LIG1-215ENST00000597901 TRIM16O95361 564 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms