RNA–Protein interactions for RNA: ENST00000594661.5

PNKP-204, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 2

Gene PNKP, Length 2,111 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-204ENST00000594661 CCDC160A6NGH7 325 aa15.69■□□□□ 0.1
PNKP-204ENST00000594661 YJEFN3A6XGL0 299 aa15.69■□□□□ 0.1
PNKP-204ENST00000594661 FYNP06241 537 aa15.69■□□□□ 0.1
PNKP-204ENST00000594661 GCAP28676 217 aa15.69■□□□□ 0.1
PNKP-204ENST00000594661 AQP4P55087 323 aa15.69■□□□□ 0.1
PNKP-204ENST00000594661 DAOAP59103 153 aa15.69■□□□□ 0.1
PNKP-204ENST00000594661 COG7P83436 770 aa15.69■□□□□ 0.1
PNKP-204ENST00000594661 SLC1A5Q15758 541 aa15.69■□□□□ 0.1
PNKP-204ENST00000594661 INAQ16352 499 aa15.69■□□□□ 0.1
PNKP-204ENST00000594661 DPYSL2Q16555 572 aa15.69■□□□□ 0.1
PNKP-204ENST00000594661 FNBP1LQ5T0N5 605 aa15.69■□□□□ 0.1
PNKP-204ENST00000594661 KYAT3Q6YP21 454 aaKnown RBP15.69■□□□□ 0.1
PNKP-204ENST00000594661 TDRPQ86YL5 185 aa15.69■□□□□ 0.1
PNKP-204ENST00000594661 ERI1Q8IV48 349 aaKnown RBP15.69■□□□□ 0.1
PNKP-204ENST00000594661 CASP10Q92851 521 aa15.69■□□□□ 0.1
PNKP-204ENST00000594661 NT5C3BQ969T7 300 aa15.69■□□□□ 0.1
PNKP-204ENST00000594661 FAF2Q96CS3 445 aa15.69■□□□□ 0.1
PNKP-204ENST00000594661 COX4I2Q96KJ9 171 aa15.69■□□□□ 0.1
PNKP-204ENST00000594661 BIRC8Q96P09 236 aa15.69■□□□□ 0.1
PNKP-204ENST00000594661 KCTD15Q96SI1 283 aaPredicted RBP15.69■□□□□ 0.1
PNKP-204ENST00000594661 CYTH2Q99418 400 aa15.69■□□□□ 0.1
PNKP-204ENST00000594661 ZNF670Q9BS34 389 aa15.69■□□□□ 0.1
PNKP-204ENST00000594661 TRABDQ9H4I3 376 aa15.69■□□□□ 0.1
PNKP-204ENST00000594661 S100A14Q9HCY8 104 aa15.69■□□□□ 0.1
PNKP-204ENST00000594661 TBC1D13Q9NVG8 400 aa15.69■□□□□ 0.1
PNKP-204ENST00000594661 SYNJ2BP-COX16A0A087WUM0 186 aa15.68■□□□□ 0.1
PNKP-204ENST00000594661 APOL1O14791 398 aa15.68■□□□□ 0.1
PNKP-204ENST00000594661 ADAM23O75077 832 aa15.68■□□□□ 0.1
PNKP-204ENST00000594661 USP17L7P0C7H9 530 aa15.68■□□□□ 0.1
PNKP-204ENST00000594661 S100A1P23297 94 aa15.68■□□□□ 0.1
PNKP-204ENST00000594661 BDNFP23560 247 aa15.68■□□□□ 0.1
PNKP-204ENST00000594661 NFKBIAP25963 317 aa15.68■□□□□ 0.1
PNKP-204ENST00000594661 STIP1P31948 543 aaKnown RBP15.68■□□□□ 0.1
PNKP-204ENST00000594661 NOS2P35228 1153 aa15.68■□□□□ 0.1
PNKP-204ENST00000594661 RPA3P35244 121 aaPredicted RBP15.68■□□□□ 0.1
PNKP-204ENST00000594661 CCR3P51677 355 aa15.68■□□□□ 0.1
PNKP-204ENST00000594661 USP41Q3LFD5 358 aa15.68■□□□□ 0.1
PNKP-204ENST00000594661 MSS51Q4VC12 460 aa15.68■□□□□ 0.1
PNKP-204ENST00000594661 SLC9A4Q6AI14 798 aa15.68■□□□□ 0.1
PNKP-204ENST00000594661 FBXL19Q6PCT2 694 aa15.68■□□□□ 0.1
PNKP-204ENST00000594661 BNIPLQ7Z465 357 aa15.68■□□□□ 0.1
PNKP-204ENST00000594661 COLGALT2Q8IYK4 626 aa15.68■□□□□ 0.1
PNKP-204ENST00000594661 PYROXD1Q8WU10 500 aa15.68■□□□□ 0.1
PNKP-204ENST00000594661 DEFB118Q96PH6 123 aa15.68■□□□□ 0.1
PNKP-204ENST00000594661 NPY6RQ99463 290 aa15.68■□□□□ 0.1
PNKP-204ENST00000594661 POPDC2Q9HBU9 364 aa15.68■□□□□ 0.1
PNKP-204ENST00000594661 CSNK1G1Q9HCP0 422 aa15.68■□□□□ 0.1
PNKP-204ENST00000594661 PAK6Q9NQU5 681 aaPredicted RBP15.68■□□□□ 0.1
PNKP-204ENST00000594661 COX16Q9P0S2 106 aa15.68■□□□□ 0.1
PNKP-204ENST00000594661 XPO7Q9UIA9 1087 aaKnown RBP15.68■□□□□ 0.1
PNKP-204ENST00000594661 DENRO43583 198 aaKnown RBP15.68■□□□□ 0.1
PNKP-204ENST00000594661 TYROBPO43914 113 aa15.68■□□□□ 0.1
PNKP-204ENST00000594661 PEX1O43933 1283 aa15.68■□□□□ 0.1
PNKP-204ENST00000594661 TMEM63AO94886 807 aa15.68■□□□□ 0.1
PNKP-204ENST00000594661 FBXO21O94952 628 aa15.68■□□□□ 0.1
PNKP-204ENST00000594661 MAP3K6O95382 1288 aa15.68■□□□□ 0.1
PNKP-204ENST00000594661 CYP2F1P24903 491 aa15.68■□□□□ 0.1
PNKP-204ENST00000594661 BCAR1P56945 870 aa15.68■□□□□ 0.1
PNKP-204ENST00000594661 NAA20P61599 178 aa15.68■□□□□ 0.1
PNKP-204ENST00000594661 MTM1Q13496 603 aa15.68■□□□□ 0.1
PNKP-204ENST00000594661 FAM182AQ5T1J6 154 aa15.68■□□□□ 0.1
PNKP-204ENST00000594661 RFX8Q6ZV50 586 aa15.68■□□□□ 0.1
PNKP-204ENST00000594661 BHLHA9Q7RTU4 235 aa15.68■□□□□ 0.1
PNKP-204ENST00000594661 ULK2Q8IYT8 1036 aa15.68■□□□□ 0.1
PNKP-204ENST00000594661 PYROXD2Q8N2H3 581 aa15.68■□□□□ 0.1
PNKP-204ENST00000594661 DBF4BQ8NFT6 615 aa15.68■□□□□ 0.1
PNKP-204ENST00000594661 URGCPQ8TCY9 931 aa15.68■□□□□ 0.1
PNKP-204ENST00000594661 MRRFQ96E11 262 aaKnown RBP15.68■□□□□ 0.1
PNKP-204ENST00000594661 PRR11Q96HE9 360 aaPredicted RBP15.68■□□□□ 0.1
PNKP-204ENST00000594661 FTHL17Q9BXU8 183 aa15.68■□□□□ 0.1
PNKP-204ENST00000594661 TRIM55Q9BYV6 548 aa15.68■□□□□ 0.1
PNKP-204ENST00000594661 TMPRSS4Q9NRS4 437 aa15.68■□□□□ 0.1
PNKP-204ENST00000594661 DCTN4Q9UJW0 460 aa15.68■□□□□ 0.1
PNKP-204ENST00000594661 NLRC5Q86WI3 1866 aa15.68■□□□□ 0.1
PNKP-204ENST00000594661 M0QYT0 321 aa15.67■□□□□ 0.1
PNKP-204ENST00000594661 TYMPP19971 482 aa15.67■□□□□ 0.1
PNKP-204ENST00000594661 TGM2P21980 687 aa15.67■□□□□ 0.1
PNKP-204ENST00000594661 GPX6P59796 221 aa15.67■□□□□ 0.1
PNKP-204ENST00000594661 CREB5Q02930 508 aa15.67■□□□□ 0.1
PNKP-204ENST00000594661 BFSP2Q13515 415 aa15.67■□□□□ 0.1
PNKP-204ENST00000594661 ZNF423Q2M1K9 1284 aa15.67■□□□□ 0.1
PNKP-204ENST00000594661 TCTN1Q2MV58 587 aa15.67■□□□□ 0.1
PNKP-204ENST00000594661 GIPC3Q8TF64 312 aa15.67■□□□□ 0.1
PNKP-204ENST00000594661 ZNF696Q9H7X3 374 aa15.67■□□□□ 0.1
PNKP-204ENST00000594661 CNGB3Q9NQW8 809 aa15.67■□□□□ 0.1
PNKP-204ENST00000594661 TMEM161AQ9NX61 479 aa15.67■□□□□ 0.1
PNKP-204ENST00000594661 SLC7A8Q9UHI5 535 aa15.67■□□□□ 0.1
PNKP-204ENST00000594661 FZD10Q9ULW2 581 aa15.67■□□□□ 0.1
PNKP-204ENST00000594661 PCDHB8Q9UN66 801 aa15.67■□□□□ 0.1
PNKP-204ENST00000594661 LZTS1Q9Y250 596 aa15.67■□□□□ 0.1
PNKP-204ENST00000594661 PRG3Q9Y2Y8 225 aaPredicted RBP15.67■□□□□ 0.1
PNKP-204ENST00000594661 AK5Q9Y6K8 562 aa15.67■□□□□ 0.1
PNKP-204ENST00000594661 CLUHO75153 1309 aa15.67■□□□□ 0.1
PNKP-204ENST00000594661 PHBP35232 272 aa15.67■□□□□ 0.1
PNKP-204ENST00000594661 OR1G1P47890 313 aa15.67■□□□□ 0.1
PNKP-204ENST00000594661 NME3Q13232 169 aa15.67■□□□□ 0.1
PNKP-204ENST00000594661 APOFQ13790 326 aa15.67■□□□□ 0.1
PNKP-204ENST00000594661 TGFBIQ15582 683 aa15.67■□□□□ 0.1
PNKP-204ENST00000594661 BBS9Q3SYG4 887 aa15.67■□□□□ 0.1
PNKP-204ENST00000594661 PDIK1LQ8N165 341 aa15.67■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms