RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 CTSLP07711 333 aa14.2□□□□□ -0.14
APOC1-208ENST00000592535 TNFAIP3P21580 790 aa14.2□□□□□ -0.14
APOC1-208ENST00000592535 RPL7AP62424 266 aaKnown RBP14.2□□□□□ -0.14
APOC1-208ENST00000592535 FAM193AP78312 1265 aa14.2□□□□□ -0.14
APOC1-208ENST00000592535 GNA12Q03113 381 aa14.2□□□□□ -0.14
APOC1-208ENST00000592535 CNTN1Q12860 1018 aa14.2□□□□□ -0.14
APOC1-208ENST00000592535 FOXC1Q12948 553 aa14.2□□□□□ -0.14
APOC1-208ENST00000592535 TEAD4Q15561 434 aa14.2□□□□□ -0.14
APOC1-208ENST00000592535 ASIC2Q16515 512 aa14.2□□□□□ -0.14
APOC1-208ENST00000592535 PPP1R15BQ5SWA1 713 aa14.2□□□□□ -0.14
APOC1-208ENST00000592535 FAM46CQ5VWP2 391 aa14.2□□□□□ -0.14
APOC1-208ENST00000592535 E4F1Q66K89 784 aaPredicted RBP14.2□□□□□ -0.14
APOC1-208ENST00000592535 RWDD4Q6NW29 188 aaKnown RBP14.2□□□□□ -0.14
APOC1-208ENST00000592535 C22orf39Q6P5X5 142 aa14.2□□□□□ -0.14
APOC1-208ENST00000592535 IL27RAQ6UWB1 636 aa14.2□□□□□ -0.14
APOC1-208ENST00000592535 ZNF783Q6ZMS7 281 aa14.2□□□□□ -0.14
APOC1-208ENST00000592535 MCOLN2Q8IZK6 566 aa14.2□□□□□ -0.14
APOC1-208ENST00000592535 OR2A12Q8NGT7 310 aa14.2□□□□□ -0.14
APOC1-208ENST00000592535 NTAN1Q96AB6 310 aa14.2□□□□□ -0.14
APOC1-208ENST00000592535 SLC6A18Q96N87 628 aa14.2□□□□□ -0.14
APOC1-208ENST00000592535 TNKS2Q9H2K2 1166 aa14.2□□□□□ -0.14
APOC1-208ENST00000592535 CBX8Q9HC52 389 aa14.2□□□□□ -0.14
APOC1-208ENST00000592535 ATP13A1Q9HD20 1204 aa14.2□□□□□ -0.14
APOC1-208ENST00000592535 NDFIP2Q9NV92 336 aa14.2□□□□□ -0.14
APOC1-208ENST00000592535 NEU3Q9UQ49 428 aa14.2□□□□□ -0.14
APOC1-208ENST00000592535 ANKRD6Q9Y2G4 727 aa14.2□□□□□ -0.14
APOC1-208ENST00000592535 TBC1D3DA0A087WVF3 549 aa14.19□□□□□ -0.14
APOC1-208ENST00000592535 TBC1D3IA0A087WXS9 549 aa14.19□□□□□ -0.14
APOC1-208ENST00000592535 TBC1D3EA0A087X179 549 aa14.19□□□□□ -0.14
APOC1-208ENST00000592535 TBC1D3KA0A087X1G2 549 aa14.19□□□□□ -0.14
APOC1-208ENST00000592535 TBC1D3FA6NER0 549 aaPredicted RBP14.19□□□□□ -0.14
APOC1-208ENST00000592535 TMCO5BA8MYB1 307 aa14.19□□□□□ -0.14
APOC1-208ENST00000592535 TBC1D3LB9A6J9 549 aa14.19□□□□□ -0.14
APOC1-208ENST00000592535 RNF103O00237 685 aa14.19□□□□□ -0.14
APOC1-208ENST00000592535 KCNK3O14649 394 aa14.19□□□□□ -0.14
APOC1-208ENST00000592535 TOP3BO95985 862 aaKnown RBP14.19□□□□□ -0.14
APOC1-208ENST00000592535 SERPINC1P01008 464 aa14.19□□□□□ -0.14
APOC1-208ENST00000592535 PLEKP08567 350 aaPredicted RBP14.19□□□□□ -0.14
APOC1-208ENST00000592535 TBC1D3HP0C7X1 549 aa14.19□□□□□ -0.14
APOC1-208ENST00000592535 RHOQP17081 205 aa14.19□□□□□ -0.14
APOC1-208ENST00000592535 CHRNA3P32297 505 aa14.19□□□□□ -0.14
APOC1-208ENST00000592535 ACVRL1P37023 503 aa14.19□□□□□ -0.14
APOC1-208ENST00000592535 CCR5P51681 352 aa14.19□□□□□ -0.14
APOC1-208ENST00000592535 CLCN6P51797 869 aa14.19□□□□□ -0.14
APOC1-208ENST00000592535 ZNF143P52747 638 aaPredicted RBP14.19□□□□□ -0.14
APOC1-208ENST00000592535 PPP2CBP62714 309 aa14.19□□□□□ -0.14
APOC1-208ENST00000592535 RACK1P63244 317 aaKnown RBP14.19□□□□□ -0.14
APOC1-208ENST00000592535 PPP2CAP67775 309 aa14.19□□□□□ -0.14
APOC1-208ENST00000592535 SIM1P81133 766 aaPredicted RBP14.19□□□□□ -0.14
APOC1-208ENST00000592535 ARF5P84085 180 aa14.19□□□□□ -0.14
APOC1-208ENST00000592535 SHC2P98077 582 aa14.19□□□□□ -0.14
APOC1-208ENST00000592535 KCNT1Q5JUK3 1230 aa14.19□□□□□ -0.14
APOC1-208ENST00000592535 AGBL4Q5VU57 503 aa14.19□□□□□ -0.14
APOC1-208ENST00000592535 TBC1D3GQ6DHY5 549 aa14.19□□□□□ -0.14
APOC1-208ENST00000592535 TBC1D3CQ6IPX1 549 aa14.19□□□□□ -0.14
APOC1-208ENST00000592535 SLFN11Q7Z7L1 901 aa14.19□□□□□ -0.14
APOC1-208ENST00000592535 LUZP1Q86V48 1076 aa14.19□□□□□ -0.14
APOC1-208ENST00000592535 NLRP14Q86W24 1093 aa14.19□□□□□ -0.14
APOC1-208ENST00000592535 NAXDQ8IW45 347 aa14.19□□□□□ -0.14
APOC1-208ENST00000592535 TBC1D3Q8IZP1 549 aaPredicted RBP14.19□□□□□ -0.14
APOC1-208ENST00000592535 PYROXD2Q8N2H3 581 aa14.19□□□□□ -0.14
APOC1-208ENST00000592535 CHST14Q8NCH0 376 aa14.19□□□□□ -0.14
APOC1-208ENST00000592535 TBC1D31Q96DN5 1066 aa14.19□□□□□ -0.14
APOC1-208ENST00000592535 CCDC114Q96M63 670 aa14.19□□□□□ -0.14
APOC1-208ENST00000592535 TTYH3Q9C0H2 523 aa14.19□□□□□ -0.14
APOC1-208ENST00000592535 HAUS4Q9H6D7 363 aa14.19□□□□□ -0.14
APOC1-208ENST00000592535 TM7SF3Q9NS93 570 aa14.19□□□□□ -0.14
APOC1-208ENST00000592535 TMEM248Q9NWD8 314 aa14.19□□□□□ -0.14
APOC1-208ENST00000592535 DNAI1Q9UI46 699 aa14.19□□□□□ -0.14
APOC1-208ENST00000592535 ACTL7AQ9Y615 435 aa14.19□□□□□ -0.14
APOC1-208ENST00000592535 CABIN1Q9Y6J0 2220 aa14.18□□□□□ -0.14
APOC1-208ENST00000592535 ANKRD62A6NC57 917 aa14.18□□□□□ -0.14
APOC1-208ENST00000592535 WNT9AO14904 365 aa14.18□□□□□ -0.14
APOC1-208ENST00000592535 SLC7A4O43246 635 aa14.18□□□□□ -0.14
APOC1-208ENST00000592535 ATMINO43313 823 aaPredicted RBP14.18□□□□□ -0.14
APOC1-208ENST00000592535 PLRG1O43660 514 aaKnown RBP14.18□□□□□ -0.14
APOC1-208ENST00000592535 ZNF821O75541 412 aaPredicted RBP14.18□□□□□ -0.14
APOC1-208ENST00000592535 WNT1P04628 370 aa14.18□□□□□ -0.14
APOC1-208ENST00000592535 ZNF883P0CG24 379 aa14.18□□□□□ -0.14
APOC1-208ENST00000592535 SPINK2P20155 84 aa14.18□□□□□ -0.14
APOC1-208ENST00000592535 MAPKAPK2P49137 400 aa14.18□□□□□ -0.14
APOC1-208ENST00000592535 SERPINH1P50454 418 aaKnown RBP14.18□□□□□ -0.14
APOC1-208ENST00000592535 OGDHQ02218 1023 aa14.18□□□□□ -0.14
APOC1-208ENST00000592535 SCAPQ12770 1279 aa14.18□□□□□ -0.14
APOC1-208ENST00000592535 NR1I3Q14994 352 aa14.18□□□□□ -0.14
APOC1-208ENST00000592535 SFMBT2Q5VUG0 894 aa14.18□□□□□ -0.14
APOC1-208ENST00000592535 RETSATQ6NUM9 610 aa14.18□□□□□ -0.14
APOC1-208ENST00000592535 SCYL2Q6P3W7 929 aa14.18□□□□□ -0.14
APOC1-208ENST00000592535 DCUN1D2Q6PH85 259 aa14.18□□□□□ -0.14
APOC1-208ENST00000592535 ZNF571Q7Z3V5 609 aaPredicted RBP14.18□□□□□ -0.14
APOC1-208ENST00000592535 ADAT2Q7Z6V5 191 aaKnown RBP14.18□□□□□ -0.14
APOC1-208ENST00000592535 DNAAF5Q86Y56 855 aa14.18□□□□□ -0.14
APOC1-208ENST00000592535 ARRDC3Q96B67 414 aa14.18□□□□□ -0.14
APOC1-208ENST00000592535 CNPY3Q9BT09 278 aa14.18□□□□□ -0.14
APOC1-208ENST00000592535 ACE2Q9BYF1 805 aaPredicted RBP14.18□□□□□ -0.14
APOC1-208ENST00000592535 AIPL1Q9NZN9 384 aa14.18□□□□□ -0.14
APOC1-208ENST00000592535 WASF3Q9UPY6 502 aa14.18□□□□□ -0.14
APOC1-208ENST00000592535 FCF1Q9Y324 198 aaKnown RBP14.18□□□□□ -0.14
APOC1-208ENST00000592535 FARP1Q9Y4F1 1045 aaPredicted RBP14.18□□□□□ -0.14
APOC1-208ENST00000592535 TPRP12270 2363 aaKnown RBP14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms