RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.69□□□□□ -0.7
VPS4B-207ENST00000591519 RBM43Q6ZSC3 357 aaKnown RBP10.69□□□□□ -0.7
VPS4B-207ENST00000591519 DSG4Q86SJ6 1040 aa10.69□□□□□ -0.7
VPS4B-207ENST00000591519 PRPF39Q86UA1 669 aaKnown RBP10.69□□□□□ -0.7
VPS4B-207ENST00000591519 IQCHQ86VS3 1027 aa10.69□□□□□ -0.7
VPS4B-207ENST00000591519 TMPRSS12Q86WS5 348 aa10.69□□□□□ -0.7
VPS4B-207ENST00000591519 FAM71AQ8IYT1 594 aa10.69□□□□□ -0.7
VPS4B-207ENST00000591519 TBC1D3Q8IZP1 549 aaPredicted RBP10.69□□□□□ -0.7
VPS4B-207ENST00000591519 C1orf131Q8NDD1 294 aaKnown RBP10.69□□□□□ -0.7
VPS4B-207ENST00000591519 OR52K2Q8NGK3 314 aa10.69□□□□□ -0.7
VPS4B-207ENST00000591519 RNF34Q969K3 372 aa10.69□□□□□ -0.7
VPS4B-207ENST00000591519 PGAP3Q96FM1 320 aaPredicted RBP10.69□□□□□ -0.7
VPS4B-207ENST00000591519 C1orf74Q96LT6 269 aa10.69□□□□□ -0.7
VPS4B-207ENST00000591519 RPRD1AQ96P16 312 aaPredicted RBP10.69□□□□□ -0.7
VPS4B-207ENST00000591519 NPY6RQ99463 290 aa10.69□□□□□ -0.7
VPS4B-207ENST00000591519 FAM204AQ9H8W3 233 aa10.69□□□□□ -0.7
VPS4B-207ENST00000591519 AASDHPPTQ9NRN7 309 aa10.69□□□□□ -0.7
VPS4B-207ENST00000591519 SAMSN1Q9NSI8 373 aaKnown RBP10.69□□□□□ -0.7
VPS4B-207ENST00000591519 ARHGEF38Q9NXL2 777 aa10.69□□□□□ -0.7
VPS4B-207ENST00000591519 DNAJC12Q9UKB3 198 aa10.69□□□□□ -0.7
VPS4B-207ENST00000591519 DMTF1Q9Y222 760 aa10.69□□□□□ -0.7
VPS4B-207ENST00000591519 HS3ST4Q9Y661 456 aa10.69□□□□□ -0.7
VPS4B-207ENST00000591519 ADAMTS20P59510 1910 aa10.68□□□□□ -0.7
VPS4B-207ENST00000591519 URB1O60287 2271 aaKnown RBP10.68□□□□□ -0.7
VPS4B-207ENST00000591519 DRGXA6NNA5 263 aa10.68□□□□□ -0.7
VPS4B-207ENST00000591519 M0QYT0 321 aa10.68□□□□□ -0.7
VPS4B-207ENST00000591519 PLRG1O43660 514 aaKnown RBP10.68□□□□□ -0.7
VPS4B-207ENST00000591519 PAGE1O75459 146 aa10.68□□□□□ -0.7
VPS4B-207ENST00000591519 GRAP2O75791 330 aa10.68□□□□□ -0.7
VPS4B-207ENST00000591519 F9P00740 461 aa10.68□□□□□ -0.7
VPS4B-207ENST00000591519 ERBB2P04626 1255 aa10.68□□□□□ -0.7
VPS4B-207ENST00000591519 ERCC5P28715 1186 aaPredicted RBP10.68□□□□□ -0.7
VPS4B-207ENST00000591519 SCNN1AP37088 669 aa10.68□□□□□ -0.7
VPS4B-207ENST00000591519 GABRB2P47870 512 aa10.68□□□□□ -0.7
VPS4B-207ENST00000591519 ARRB1P49407 418 aaPredicted RBP10.68□□□□□ -0.7
VPS4B-207ENST00000591519 CDH4P55283 916 aa10.68□□□□□ -0.7
VPS4B-207ENST00000591519 NXPH1P58417 271 aa10.68□□□□□ -0.7
VPS4B-207ENST00000591519 BPIFB4P59827 614 aa10.68□□□□□ -0.7
VPS4B-207ENST00000591519 TYRO3Q06418 890 aa10.68□□□□□ -0.7
VPS4B-207ENST00000591519 DLG2Q15700 870 aa10.68□□□□□ -0.7
VPS4B-207ENST00000591519 PTPN20Q4JDL3 420 aa10.68□□□□□ -0.7
VPS4B-207ENST00000591519 BRMS1LQ5PSV4 323 aa10.68□□□□□ -0.7
VPS4B-207ENST00000591519 ACBD5Q5T8D3 534 aaPredicted RBP10.68□□□□□ -0.7
VPS4B-207ENST00000591519 OR6B2Q6IFH4 312 aa10.68□□□□□ -0.7
VPS4B-207ENST00000591519 NAPEPLDQ6IQ20 393 aa10.68□□□□□ -0.7
VPS4B-207ENST00000591519 FAM183BPQ6ZVS7 135 aa10.68□□□□□ -0.7
VPS4B-207ENST00000591519 C14orf80Q86SX3 495 aa10.68□□□□□ -0.7
VPS4B-207ENST00000591519 SLC47A2Q86VL8 602 aa10.68□□□□□ -0.7
VPS4B-207ENST00000591519 TRIM69Q86WT6 500 aa10.68□□□□□ -0.7
VPS4B-207ENST00000591519 CIR1Q86X95 450 aaPredicted RBP10.68□□□□□ -0.7
VPS4B-207ENST00000591519 GATAD2AQ86YP4 633 aa10.68□□□□□ -0.7
VPS4B-207ENST00000591519 ZNF683Q8IZ20 524 aa10.68□□□□□ -0.7
VPS4B-207ENST00000591519 OXR1Q8N573 874 aa10.68□□□□□ -0.7
VPS4B-207ENST00000591519 SH2D3CQ8N5H7 860 aa10.68□□□□□ -0.7
VPS4B-207ENST00000591519 MDM1Q8TC05 714 aa10.68□□□□□ -0.7
VPS4B-207ENST00000591519 OR8D1Q8WZ84 308 aa10.68□□□□□ -0.7
VPS4B-207ENST00000591519 TSC1Q92574 1164 aa10.68□□□□□ -0.7
VPS4B-207ENST00000591519 SERAC1Q96JX3 654 aa10.68□□□□□ -0.7
VPS4B-207ENST00000591519 WDCPQ9H6R7 721 aa10.68□□□□□ -0.7
VPS4B-207ENST00000591519 GDF3Q9NR23 364 aa10.68□□□□□ -0.7
VPS4B-207ENST00000591519 ANO10Q9NW15 660 aa10.68□□□□□ -0.7
VPS4B-207ENST00000591519 FTSJ1Q9UET6 329 aa10.68□□□□□ -0.7
VPS4B-207ENST00000591519 AJAP1Q9UKB5 411 aaPredicted RBP10.68□□□□□ -0.7
VPS4B-207ENST00000591519 SARDHQ9UL12 918 aa10.68□□□□□ -0.7
VPS4B-207ENST00000591519 VANGL2Q9ULK5 521 aa10.68□□□□□ -0.7
VPS4B-207ENST00000591519 HS3ST2Q9Y278 367 aa10.68□□□□□ -0.7
VPS4B-207ENST00000591519 ARID1BQ8NFD5 2236 aaPredicted RBP10.68□□□□□ -0.7
VPS4B-207ENST00000591519 APC2O95996 2303 aa10.67□□□□□ -0.7
VPS4B-207ENST00000591519 I6L893 689 aaPredicted RBP10.67□□□□□ -0.7
VPS4B-207ENST00000591519 RNGTTO60942 597 aaKnown RBP10.67□□□□□ -0.7
VPS4B-207ENST00000591519 DAB1O75553 588 aa10.67□□□□□ -0.7
VPS4B-207ENST00000591519 LDOC1O95751 146 aaPredicted RBP10.67□□□□□ -0.7
VPS4B-207ENST00000591519 ITGAVP06756 1048 aa10.67□□□□□ -0.7
VPS4B-207ENST00000591519 IRAK1P51617 712 aa10.67□□□□□ -0.7
VPS4B-207ENST00000591519 METAP1P53582 386 aa10.67□□□□□ -0.7
VPS4B-207ENST00000591519 PPP2CBP62714 309 aa10.67□□□□□ -0.7
VPS4B-207ENST00000591519 PPP2CAP67775 309 aa10.67□□□□□ -0.7
VPS4B-207ENST00000591519 IL9RQ01113 521 aa10.67□□□□□ -0.7
VPS4B-207ENST00000591519 CENPCQ03188 943 aa10.67□□□□□ -0.7
VPS4B-207ENST00000591519 NME3Q13232 169 aa10.67□□□□□ -0.7
VPS4B-207ENST00000591519 MAN2A1Q16706 1144 aa10.67□□□□□ -0.7
VPS4B-207ENST00000591519 ACCSLQ4AC99 568 aa10.67□□□□□ -0.7
VPS4B-207ENST00000591519 ARTNQ5T4W7 220 aa10.67□□□□□ -0.7
VPS4B-207ENST00000591519 AGBL4Q5VU57 503 aa10.67□□□□□ -0.7
VPS4B-207ENST00000591519 SFMBT2Q5VUG0 894 aa10.67□□□□□ -0.7
VPS4B-207ENST00000591519 OTUD1Q5VV17 481 aaPredicted RBP10.67□□□□□ -0.7
VPS4B-207ENST00000591519 NEK5Q6P3R8 708 aa10.67□□□□□ -0.7
VPS4B-207ENST00000591519 DHRS13Q6UX07 377 aa10.67□□□□□ -0.7
VPS4B-207ENST00000591519 KANSL1Q7Z3B3 1105 aa10.67□□□□□ -0.7
VPS4B-207ENST00000591519 BNIPLQ7Z465 357 aa10.67□□□□□ -0.7
VPS4B-207ENST00000591519 SETD3Q86TU7 594 aaPredicted RBP10.67□□□□□ -0.7
VPS4B-207ENST00000591519 SPATS2Q86XZ4 545 aaKnown RBP10.67□□□□□ -0.7
VPS4B-207ENST00000591519 PASD1Q8IV76 773 aa10.67□□□□□ -0.7
VPS4B-207ENST00000591519 FAM114A1Q8IWE2 563 aa10.67□□□□□ -0.7
VPS4B-207ENST00000591519 CACTIN-AS1Q8N1I8 211 aa10.67□□□□□ -0.7
VPS4B-207ENST00000591519 TMEM35BQ8NCS4 154 aa10.67□□□□□ -0.7
VPS4B-207ENST00000591519 PIP4K2CQ8TBX8 421 aa10.67□□□□□ -0.7
VPS4B-207ENST00000591519 C18orf8Q96DM3 657 aa10.67□□□□□ -0.7
VPS4B-207ENST00000591519 NDST4Q9H3R1 872 aa10.67□□□□□ -0.7
VPS4B-207ENST00000591519 PREBQ9HCU5 417 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms