RNA–Protein interactions for RNA: ENST00000589788.1

SDF2-208, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,342 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-208ENST00000589788 LRP3O75074 770 aa10.64□□□□□ -0.71
SDF2-208ENST00000589788 CNTN5O94779 1100 aa10.64□□□□□ -0.71
SDF2-208ENST00000589788 RHOCP08134 193 aa10.64□□□□□ -0.71
SDF2-208ENST00000589788 SRPRAP08240 638 aaKnown RBP10.64□□□□□ -0.71
SDF2-208ENST00000589788 PLEKP08567 350 aaPredicted RBP10.64□□□□□ -0.71
SDF2-208ENST00000589788 ACADMP11310 421 aa10.64□□□□□ -0.71
SDF2-208ENST00000589788 OR1E1P30953 314 aa10.64□□□□□ -0.71
SDF2-208ENST00000589788 DHPSP49366 369 aaPredicted RBP10.64□□□□□ -0.71
SDF2-208ENST00000589788 NUMBP49757 651 aa10.64□□□□□ -0.71
SDF2-208ENST00000589788 PLK1P53350 603 aa10.64□□□□□ -0.71
SDF2-208ENST00000589788 CAMK2GQ13555 558 aaPredicted RBP10.64□□□□□ -0.71
SDF2-208ENST00000589788 ALFQ53S48 1182 aa10.64□□□□□ -0.71
SDF2-208ENST00000589788 C6orf118Q5T5N4 469 aa10.64□□□□□ -0.71
SDF2-208ENST00000589788 HGSNATQ68CP4 663 aa10.64□□□□□ -0.71
SDF2-208ENST00000589788 PLEKHA7Q6IQ23 1121 aa10.64□□□□□ -0.71
SDF2-208ENST00000589788 CXorf57Q6NSI4 855 aaKnown RBP10.64□□□□□ -0.71
SDF2-208ENST00000589788 TMEM214Q6NUQ4 689 aaKnown RBP10.64□□□□□ -0.71
SDF2-208ENST00000589788 RWDD4Q6NW29 188 aaKnown RBP10.64□□□□□ -0.71
SDF2-208ENST00000589788 SLC36A4Q6YBV0 504 aa10.64□□□□□ -0.71
SDF2-208ENST00000589788 TFAP2DQ7Z6R9 452 aa10.64□□□□□ -0.71
SDF2-208ENST00000589788 SLFN11Q7Z7L1 901 aa10.64□□□□□ -0.71
SDF2-208ENST00000589788 SETD3Q86TU7 594 aaPredicted RBP10.64□□□□□ -0.71
SDF2-208ENST00000589788 CACUL1Q86Y37 369 aa10.64□□□□□ -0.71
SDF2-208ENST00000589788 DNAAF5Q86Y56 855 aa10.64□□□□□ -0.71
SDF2-208ENST00000589788 ZNF683Q8IZ20 524 aa10.64□□□□□ -0.71
SDF2-208ENST00000589788 CCDC185Q8N715 623 aa10.64□□□□□ -0.71
SDF2-208ENST00000589788 KDM1BQ8NB78 822 aa10.64□□□□□ -0.71
SDF2-208ENST00000589788 OR8K1Q8NGG5 319 aa10.64□□□□□ -0.71
SDF2-208ENST00000589788 OR2T3Q8NH03 318 aa10.64□□□□□ -0.71
SDF2-208ENST00000589788 RNF217Q8TC41 542 aa10.64□□□□□ -0.71
SDF2-208ENST00000589788 SIPA1Q96FS4 1042 aa10.64□□□□□ -0.71
SDF2-208ENST00000589788 FEM1AQ9BSK4 669 aa10.64□□□□□ -0.71
SDF2-208ENST00000589788 ZYG11BQ9C0D3 744 aa10.64□□□□□ -0.71
SDF2-208ENST00000589788 MKRN2Q9H000 416 aaKnown RBP10.64□□□□□ -0.71
SDF2-208ENST00000589788 FBRSQ9HAH7 460 aa10.64□□□□□ -0.71
SDF2-208ENST00000589788 MRPL47Q9HD33 250 aaKnown RBP10.64□□□□□ -0.71
SDF2-208ENST00000589788 ZNHIT6Q9NWK9 470 aaKnown RBP10.64□□□□□ -0.71
SDF2-208ENST00000589788 MPP6Q9NZW5 540 aa10.64□□□□□ -0.71
SDF2-208ENST00000589788 MYO1AQ9UBC5 1043 aa10.64□□□□□ -0.71
SDF2-208ENST00000589788 SLC25A13Q9UJS0 675 aa10.64□□□□□ -0.71
SDF2-208ENST00000589788 DCTN4Q9UJW0 460 aa10.64□□□□□ -0.71
SDF2-208ENST00000589788 CYP8B1Q9UNU6 501 aa10.64□□□□□ -0.71
SDF2-208ENST00000589788 TBC1D30Q9Y2I9 924 aa10.64□□□□□ -0.71
SDF2-208ENST00000589788 SCINQ9Y6U3 715 aa10.64□□□□□ -0.71
SDF2-208ENST00000589788 DOCK4Q8N1I0 1966 aa10.64□□□□□ -0.71
SDF2-208ENST00000589788 ABCA7Q8IZY2 2146 aa10.64□□□□□ -0.71
SDF2-208ENST00000589788 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.63□□□□□ -0.71
SDF2-208ENST00000589788 NDUFS2O75306 463 aa10.63□□□□□ -0.71
SDF2-208ENST00000589788 RNF8O76064 485 aa10.63□□□□□ -0.71
SDF2-208ENST00000589788 EPN2O95208 641 aa10.63□□□□□ -0.71
SDF2-208ENST00000589788 PSMA2P25787 234 aa10.63□□□□□ -0.71
SDF2-208ENST00000589788 AIF1P55008 147 aa10.63□□□□□ -0.71
SDF2-208ENST00000589788 KRT83P78385 493 aa10.63□□□□□ -0.71
SDF2-208ENST00000589788 NRG1Q02297 640 aaPredicted RBP10.63□□□□□ -0.71
SDF2-208ENST00000589788 RPL6Q02878 288 aaKnown RBP10.63□□□□□ -0.71
SDF2-208ENST00000589788 CREB5Q02930 508 aa10.63□□□□□ -0.71
SDF2-208ENST00000589788 TBX2Q13207 712 aaPredicted RBP10.63□□□□□ -0.71
SDF2-208ENST00000589788 HNRNPA1L2Q32P51 320 aaKnown RBP10.63□□□□□ -0.71
SDF2-208ENST00000589788 EFHC2Q5JST6 749 aa10.63□□□□□ -0.71
SDF2-208ENST00000589788 PMS2CLQ68D20 193 aa10.63□□□□□ -0.71
SDF2-208ENST00000589788 MRPL14Q6P1L8 145 aaKnown RBP10.63□□□□□ -0.71
SDF2-208ENST00000589788 TMEFF1Q8IYR6 380 aa10.63□□□□□ -0.71
SDF2-208ENST00000589788 FRMD1Q8N878 549 aa10.63□□□□□ -0.71
SDF2-208ENST00000589788 SPC24Q8NBT2 197 aa10.63□□□□□ -0.71
SDF2-208ENST00000589788 NTAN1Q96AB6 310 aa10.63□□□□□ -0.71
SDF2-208ENST00000589788 RPL10LQ96L21 214 aaKnown RBP10.63□□□□□ -0.71
SDF2-208ENST00000589788 MRGPRX3Q96LB0 322 aa10.63□□□□□ -0.71
SDF2-208ENST00000589788 PHACTR1Q9C0D0 580 aa10.63□□□□□ -0.71
SDF2-208ENST00000589788 ISCUQ9H1K1 167 aa10.63□□□□□ -0.71
SDF2-208ENST00000589788 OSBPL2Q9H1P3 480 aa10.63□□□□□ -0.71
SDF2-208ENST00000589788 ARRDC1-AS1Q9H2J1 176 aa10.63□□□□□ -0.71
SDF2-208ENST00000589788 PRSS16Q9NQE7 514 aa10.63□□□□□ -0.71
SDF2-208ENST00000589788 PPARGC1AQ9UBK2 798 aaKnown RBP10.63□□□□□ -0.71
SDF2-208ENST00000589788 PCDHGA5Q9Y5G8 931 aa10.63□□□□□ -0.71
SDF2-208ENST00000589788 GVINP1Q7Z2Y8 2422 aa10.63□□□□□ -0.71
SDF2-208ENST00000589788 CEP192Q8TEP8 1941 aa10.62□□□□□ -0.71
SDF2-208ENST00000589788 A0A087X0T9 212 aa10.62□□□□□ -0.71
SDF2-208ENST00000589788 IGHV1OR15-9A0A0B4J2B8 117 aa10.62□□□□□ -0.71
SDF2-208ENST00000589788 EDDM13A0A1B0GTR0 161 aa10.62□□□□□ -0.71
SDF2-208ENST00000589788 FAM187AA6NFU0 413 aa10.62□□□□□ -0.71
SDF2-208ENST00000589788 TMEM191CA6NGB0 347 aa10.62□□□□□ -0.71
SDF2-208ENST00000589788 TTC34A8MYJ7 566 aa10.62□□□□□ -0.71
SDF2-208ENST00000589788 RNASEH1O60930 286 aaKnown RBP10.62□□□□□ -0.71
SDF2-208ENST00000589788 DNTTP04053 509 aa10.62□□□□□ -0.71
SDF2-208ENST00000589788 FAM228BP0C875 321 aa10.62□□□□□ -0.71
SDF2-208ENST00000589788 HNRNPH3P31942 346 aaKnown RBP10.62□□□□□ -0.71
SDF2-208ENST00000589788 EIF4A3P38919 411 aaKnown RBP10.62□□□□□ -0.71
SDF2-208ENST00000589788 MPLP40238 635 aa10.62□□□□□ -0.71
SDF2-208ENST00000589788 STK19P49842 368 aaPredicted RBP10.62□□□□□ -0.71
SDF2-208ENST00000589788 TPMTP51580 245 aa10.62□□□□□ -0.71
SDF2-208ENST00000589788 COPAP53621 1224 aa10.62□□□□□ -0.71
SDF2-208ENST00000589788 OGDHQ02218 1023 aa10.62□□□□□ -0.71
SDF2-208ENST00000589788 SCAPQ12770 1279 aa10.62□□□□□ -0.71
SDF2-208ENST00000589788 ACCSLQ4AC99 568 aa10.62□□□□□ -0.71
SDF2-208ENST00000589788 SPDYCQ5MJ68 293 aa10.62□□□□□ -0.71
SDF2-208ENST00000589788 CCDC122Q5T0U0 273 aa10.62□□□□□ -0.71
SDF2-208ENST00000589788 ZNF776Q68DI1 518 aaPredicted RBP10.62□□□□□ -0.71
SDF2-208ENST00000589788 ALKBH5Q6P6C2 394 aaKnown RBP10.62□□□□□ -0.71
SDF2-208ENST00000589788 ARMCX6Q7L4S7 300 aa10.62□□□□□ -0.71
SDF2-208ENST00000589788 OR52K2Q8NGK3 314 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms