RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 ZNF354CQ86Y25 554 aa8.94□□□□□ -0.98
SMAD4-206ENST00000588860 CCNJLQ8IV13 435 aa8.94□□□□□ -0.98
SMAD4-206ENST00000588860 LGI2Q8N0V4 545 aa8.94□□□□□ -0.98
SMAD4-206ENST00000588860 UMODL1-AS1Q8N2C9 162 aa8.94□□□□□ -0.98
SMAD4-206ENST00000588860 DNAAF3Q8N9W5 541 aa8.94□□□□□ -0.98
SMAD4-206ENST00000588860 ZNF461Q8TAF7 563 aa8.94□□□□□ -0.98
SMAD4-206ENST00000588860 IGSF8Q969P0 613 aa8.94□□□□□ -0.98
SMAD4-206ENST00000588860 HMCESQ96FZ2 354 aa8.94□□□□□ -0.98
SMAD4-206ENST00000588860 CHMP6Q96FZ7 201 aa8.94□□□□□ -0.98
SMAD4-206ENST00000588860 RPRD1AQ96P16 312 aaPredicted RBP8.94□□□□□ -0.98
SMAD4-206ENST00000588860 IL12RB2Q99665 862 aa8.94□□□□□ -0.98
SMAD4-206ENST00000588860 PAIP2Q9BPZ3 127 aaKnown RBP8.94□□□□□ -0.98
SMAD4-206ENST00000588860 APOL2Q9BQE5 337 aa8.94□□□□□ -0.98
SMAD4-206ENST00000588860 NAT9Q9BTE0 207 aa8.94□□□□□ -0.98
SMAD4-206ENST00000588860 CCDC134Q9H6E4 229 aa8.94□□□□□ -0.98
SMAD4-206ENST00000588860 NOL6Q9H6R4 1146 aaKnown RBP8.94□□□□□ -0.98
SMAD4-206ENST00000588860 LRRC40Q9H9A6 602 aa8.94□□□□□ -0.98
SMAD4-206ENST00000588860 SP110Q9HB58 689 aa8.94□□□□□ -0.98
SMAD4-206ENST00000588860 GLOD4Q9HC38 313 aa8.94□□□□□ -0.98
SMAD4-206ENST00000588860 CASS4Q9NQ75 786 aa8.94□□□□□ -0.98
SMAD4-206ENST00000588860 SMYD2Q9NRG4 433 aa8.94□□□□□ -0.98
SMAD4-206ENST00000588860 MRPL17Q9NRX2 175 aaKnown RBP8.94□□□□□ -0.98
SMAD4-206ENST00000588860 TMEM248Q9NWD8 314 aa8.94□□□□□ -0.98
SMAD4-206ENST00000588860 UBP1Q9NZI7 540 aa8.94□□□□□ -0.98
SMAD4-206ENST00000588860 TRPM5Q9NZQ8 1165 aa8.94□□□□□ -0.98
SMAD4-206ENST00000588860 SAMD15Q9P1V8 674 aa8.94□□□□□ -0.98
SMAD4-206ENST00000588860 HSFX1Q9UBD0 423 aa8.94□□□□□ -0.98
SMAD4-206ENST00000588860 EYSQ5T1H1 3165 aa8.94□□□□□ -0.98
SMAD4-206ENST00000588860 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.93□□□□□ -0.98
SMAD4-206ENST00000588860 DRGXA6NNA5 263 aa8.93□□□□□ -0.98
SMAD4-206ENST00000588860 TRIM49D1C9J1S8 452 aa8.93□□□□□ -0.98
SMAD4-206ENST00000588860 GOLGA8RI6L899 631 aa8.93□□□□□ -0.98
SMAD4-206ENST00000588860 COCHO43405 550 aa8.93□□□□□ -0.98
SMAD4-206ENST00000588860 UGT1A9O60656 530 aa8.93□□□□□ -0.98
SMAD4-206ENST00000588860 ANXA9O76027 345 aa8.93□□□□□ -0.98
SMAD4-206ENST00000588860 C1QAP02745 245 aa8.93□□□□□ -0.98
SMAD4-206ENST00000588860 VIMP08670 466 aaKnown RBP8.93□□□□□ -0.98
SMAD4-206ENST00000588860 KRT4P19013 534 aa8.93□□□□□ -0.98
SMAD4-206ENST00000588860 CA4P22748 312 aa8.93□□□□□ -0.98
SMAD4-206ENST00000588860 SLC11A2P49281 568 aa8.93□□□□□ -0.98
SMAD4-206ENST00000588860 EPHB3P54753 998 aa8.93□□□□□ -0.98
SMAD4-206ENST00000588860 GEMP55040 296 aa8.93□□□□□ -0.98
SMAD4-206ENST00000588860 CREMQ03060 361 aa8.93□□□□□ -0.98
SMAD4-206ENST00000588860 RAB33AQ14088 237 aa8.93□□□□□ -0.98
SMAD4-206ENST00000588860 CRYMQ14894 314 aa8.93□□□□□ -0.98
SMAD4-206ENST00000588860 QPCTQ16769 361 aa8.93□□□□□ -0.98
SMAD4-206ENST00000588860 SPANXN3Q5MJ09 141 aa8.93□□□□□ -0.98
SMAD4-206ENST00000588860 ZNF697Q5TEC3 545 aa8.93□□□□□ -0.98
SMAD4-206ENST00000588860 SNX30Q5VWJ9 437 aa8.93□□□□□ -0.98
SMAD4-206ENST00000588860 NAPEPLDQ6IQ20 393 aa8.93□□□□□ -0.98
SMAD4-206ENST00000588860 MARK2Q7KZI7 788 aaKnown RBP8.93□□□□□ -0.98
SMAD4-206ENST00000588860 CPLX4Q7Z7G2 160 aa8.93□□□□□ -0.98
SMAD4-206ENST00000588860 LRRC6Q86X45 466 aa8.93□□□□□ -0.98
SMAD4-206ENST00000588860 LRRC49Q8IUZ0 686 aa8.93□□□□□ -0.98
SMAD4-206ENST00000588860 LRRC34Q8IZ02 419 aa8.93□□□□□ -0.98
SMAD4-206ENST00000588860 FIBCD1Q8N539 461 aa8.93□□□□□ -0.98
SMAD4-206ENST00000588860 ZNF276Q8N554 614 aa8.93□□□□□ -0.98
SMAD4-206ENST00000588860 CNTD1Q8N815 330 aa8.93□□□□□ -0.98
SMAD4-206ENST00000588860 IPMKQ8NFU5 416 aa8.93□□□□□ -0.98
SMAD4-206ENST00000588860 ZSCAN18Q8TBC5 510 aaPredicted RBP8.93□□□□□ -0.98
SMAD4-206ENST00000588860 MZB1Q8WU39 189 aa8.93□□□□□ -0.98
SMAD4-206ENST00000588860 CKAP2Q8WWK9 683 aa8.93□□□□□ -0.98
SMAD4-206ENST00000588860 ZDHHC16Q969W1 377 aa8.93□□□□□ -0.98
SMAD4-206ENST00000588860 ZNF669Q96BR6 464 aaPredicted RBP8.93□□□□□ -0.98
SMAD4-206ENST00000588860 PLD4Q96BZ4 506 aa8.93□□□□□ -0.98
SMAD4-206ENST00000588860 TRMT2BQ96GJ1 504 aaKnown RBP8.93□□□□□ -0.98
SMAD4-206ENST00000588860 OXNAD1Q96HP4 312 aaPredicted RBP8.93□□□□□ -0.98
SMAD4-206ENST00000588860 PPP1R2P1Q96PQ5 205 aa8.93□□□□□ -0.98
SMAD4-206ENST00000588860 FCRL5Q96RD9 977 aa8.93□□□□□ -0.98
SMAD4-206ENST00000588860 KLF6Q99612 283 aaPredicted RBP8.93□□□□□ -0.98
SMAD4-206ENST00000588860 TBL1YQ9BQ87 522 aa8.93□□□□□ -0.98
SMAD4-206ENST00000588860 FICDQ9BVA6 458 aa8.93□□□□□ -0.98
SMAD4-206ENST00000588860 NSRP1Q9H0G5 558 aaKnown RBP8.93□□□□□ -0.98
SMAD4-206ENST00000588860 UGT1A7Q9HAW7 530 aa8.93□□□□□ -0.98
SMAD4-206ENST00000588860 UGT1A10Q9HAW8 530 aa8.93□□□□□ -0.98
SMAD4-206ENST00000588860 UGT1A8Q9HAW9 530 aa8.93□□□□□ -0.98
SMAD4-206ENST00000588860 SSU72Q9NP77 194 aaKnown RBP8.93□□□□□ -0.98
SMAD4-206ENST00000588860 RBM22Q9NW64 420 aaKnown RBP eCLIP8.93□□□□□ -0.982e-11■□□□□ 8.7
SMAD4-206ENST00000588860 DONSONQ9NYP3 566 aa8.93□□□□□ -0.98
SMAD4-206ENST00000588860 BFARQ9NZS9 450 aa8.93□□□□□ -0.98
SMAD4-206ENST00000588860 IPO11Q9UI26 975 aaKnown RBP8.93□□□□□ -0.98
SMAD4-206ENST00000588860 AAR2Q9Y312 384 aaKnown RBP8.93□□□□□ -0.98
SMAD4-206ENST00000588860 ARIH1Q9Y4X5 557 aaPredicted RBP8.93□□□□□ -0.98
SMAD4-206ENST00000588860 PCDHB12Q9Y5F1 795 aa8.93□□□□□ -0.98
SMAD4-206ENST00000588860 PRUNE2Q8WUY3 3088 aa8.92□□□□□ -0.98
SMAD4-206ENST00000588860 ATG2AQ2TAZ0 1938 aa8.92□□□□□ -0.98
SMAD4-206ENST00000588860 TCP11X1B4DZS4 312 aa8.92□□□□□ -0.98
SMAD4-206ENST00000588860 EBAG9O00559 213 aa8.92□□□□□ -0.98
SMAD4-206ENST00000588860 CACNG3O60359 315 aa8.92□□□□□ -0.98
SMAD4-206ENST00000588860 ACSL4O60488 711 aa8.92□□□□□ -0.98
SMAD4-206ENST00000588860 RAMP2O60895 175 aa8.92□□□□□ -0.98
SMAD4-206ENST00000588860 FGF18O76093 207 aa8.92□□□□□ -0.98
SMAD4-206ENST00000588860 ZWINTO95229 277 aa8.92□□□□□ -0.98
SMAD4-206ENST00000588860 SNRPAP09012 282 aaKnown RBP8.92□□□□□ -0.98
SMAD4-206ENST00000588860 IRF1P10914 325 aa8.92□□□□□ -0.98
SMAD4-206ENST00000588860 CORO1AP31146 461 aaKnown RBP8.92□□□□□ -0.98
SMAD4-206ENST00000588860 SLC6A4P31645 630 aa8.92□□□□□ -0.98
SMAD4-206ENST00000588860 RPA3P35244 121 aaPredicted RBP8.92□□□□□ -0.98
SMAD4-206ENST00000588860 MAPKAPK2P49137 400 aa8.92□□□□□ -0.98
SMAD4-206ENST00000588860 NPY2RP49146 381 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms