RNA–Protein interactions for RNA: ENST00000588032.5

TPM4-207, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 712 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-207ENST00000588032 PPM1HQ9ULR3 514 aa10.33□□□□□ -0.76
TPM4-207ENST00000588032 FZD4Q9ULV1 537 aa10.33□□□□□ -0.76
TPM4-207ENST00000588032 TPX2Q9ULW0 747 aaKnown RBP10.33□□□□□ -0.76
TPM4-207ENST00000588032 MUC22E2RYF6 1773 aaPredicted RBP10.32□□□□□ -0.76
TPM4-207ENST00000588032 C1QTNF3-AMACRE9PGA6 284 aa10.32□□□□□ -0.76
TPM4-207ENST00000588032 H3BRJ5 948 aa10.32□□□□□ -0.76
TPM4-207ENST00000588032 KHNYNO15037 678 aaKnown RBP10.32□□□□□ -0.76
TPM4-207ENST00000588032 PROSCO94903 275 aa10.32□□□□□ -0.76
TPM4-207ENST00000588032 IL1BP01584 269 aa10.32□□□□□ -0.76
TPM4-207ENST00000588032 GOT1P17174 413 aa10.32□□□□□ -0.76
TPM4-207ENST00000588032 ARL4AP40617 200 aa10.32□□□□□ -0.76
TPM4-207ENST00000588032 ARHGAP25P42331 645 aa10.32□□□□□ -0.76
TPM4-207ENST00000588032 PTGER3P43115 390 aa10.32□□□□□ -0.76
TPM4-207ENST00000588032 ARF5P84085 180 aa10.32□□□□□ -0.76
TPM4-207ENST00000588032 TCEAL1Q15170 157 aa10.32□□□□□ -0.76
TPM4-207ENST00000588032 DPYSL2Q16555 572 aa10.32□□□□□ -0.76
TPM4-207ENST00000588032 CA9Q16790 459 aa10.32□□□□□ -0.76
TPM4-207ENST00000588032 INO80DQ53TQ3 878 aaPredicted RBP10.32□□□□□ -0.76
TPM4-207ENST00000588032 PPP6R3Q5H9R7 873 aaPredicted RBP10.32□□□□□ -0.76
TPM4-207ENST00000588032 PEAR1Q5VY43 1037 aaPredicted RBP10.32□□□□□ -0.76
TPM4-207ENST00000588032 PRR23CQ6ZRP0 262 aa10.32□□□□□ -0.76
TPM4-207ENST00000588032 RFX8Q6ZV50 586 aa10.32□□□□□ -0.76
TPM4-207ENST00000588032 CYP4V2Q6ZWL3 525 aaPredicted RBP10.32□□□□□ -0.76
TPM4-207ENST00000588032 PCDH20Q8N6Y1 951 aaKnown RBP10.32□□□□□ -0.76
TPM4-207ENST00000588032 TMIEQ8NEW7 156 aa10.32□□□□□ -0.76
TPM4-207ENST00000588032 SLC35G2Q8TBE7 412 aa10.32□□□□□ -0.76
TPM4-207ENST00000588032 GANCQ8TET4 914 aa10.32□□□□□ -0.76
TPM4-207ENST00000588032 PIGKQ92643 395 aa10.32□□□□□ -0.76
TPM4-207ENST00000588032 HSPA12BQ96MM6 686 aa10.32□□□□□ -0.76
TPM4-207ENST00000588032 PEBP4Q96S96 227 aa10.32□□□□□ -0.76
TPM4-207ENST00000588032 GPR174Q9BXC1 333 aa10.32□□□□□ -0.76
TPM4-207ENST00000588032 PARD6AQ9NPB6 346 aa10.32□□□□□ -0.76
TPM4-207ENST00000588032 LUC7LQ9NQ29 371 aaKnown RBP10.32□□□□□ -0.76
TPM4-207ENST00000588032 SPTLC3Q9NUV7 552 aa10.32□□□□□ -0.76
TPM4-207ENST00000588032 GPATCH2LQ9NWQ4 482 aa10.32□□□□□ -0.76
TPM4-207ENST00000588032 FBXL12Q9NXK8 326 aa10.32□□□□□ -0.76
TPM4-207ENST00000588032 IMPACTQ9P2X3 320 aa10.32□□□□□ -0.76
TPM4-207ENST00000588032 SUSD2Q9UGT4 822 aa10.32□□□□□ -0.76
TPM4-207ENST00000588032 EVLQ9UI08 416 aaPredicted RBP10.32□□□□□ -0.76
TPM4-207ENST00000588032 PILRBQ9UKJ0 227 aa10.32□□□□□ -0.76
TPM4-207ENST00000588032 CKAP5Q14008 2032 aa10.32□□□□□ -0.76
TPM4-207ENST00000588032 EML5Q05BV3 1969 aa10.32□□□□□ -0.76
TPM4-207ENST00000588032 PLXND1Q9Y4D7 1925 aa10.31□□□□□ -0.76
TPM4-207ENST00000588032 ARHGAP42A6NI28 874 aa10.31□□□□□ -0.76
TPM4-207ENST00000588032 LRRC72A6NJI9 287 aa10.31□□□□□ -0.76
TPM4-207ENST00000588032 RASA4BC9J798 803 aa10.31□□□□□ -0.76
TPM4-207ENST00000588032 K7ERQ8 282 aa10.31□□□□□ -0.76
TPM4-207ENST00000588032 MID1O15344 667 aa10.31□□□□□ -0.76
TPM4-207ENST00000588032 SLC7A4O43246 635 aa10.31□□□□□ -0.76
TPM4-207ENST00000588032 RASA4O43374 803 aa10.31□□□□□ -0.76
TPM4-207ENST00000588032 MTA2O94776 668 aa10.31□□□□□ -0.76
TPM4-207ENST00000588032 LCA5LO95447 670 aa10.31□□□□□ -0.76
TPM4-207ENST00000588032 SEMA4FO95754 770 aa10.31□□□□□ -0.76
TPM4-207ENST00000588032 PRNPP04156 253 aa10.31□□□□□ -0.76
TPM4-207ENST00000588032 KRT7P08729 469 aa10.31□□□□□ -0.76
TPM4-207ENST00000588032 RARAP10276 462 aa10.31□□□□□ -0.76
TPM4-207ENST00000588032 VAV1P15498 845 aa10.31□□□□□ -0.76
TPM4-207ENST00000588032 GNSP15586 552 aa10.31□□□□□ -0.76
TPM4-207ENST00000588032 ERCC2P18074 760 aa10.31□□□□□ -0.76
TPM4-207ENST00000588032 GLDCP23378 1020 aa10.31□□□□□ -0.76
TPM4-207ENST00000588032 IL1R2P27930 398 aa10.31□□□□□ -0.76
TPM4-207ENST00000588032 CDC25BP30305 580 aa10.31□□□□□ -0.76
TPM4-207ENST00000588032 CHRNA3P32297 505 aa10.31□□□□□ -0.76
TPM4-207ENST00000588032 ACSL1P33121 698 aa10.31□□□□□ -0.76
TPM4-207ENST00000588032 MAN1A1P33908 653 aa10.31□□□□□ -0.76
TPM4-207ENST00000588032 CYLC1P35663 651 aaPredicted RBP10.31□□□□□ -0.76
TPM4-207ENST00000588032 ACVRL1P37023 503 aa10.31□□□□□ -0.76
TPM4-207ENST00000588032 NUMBP49757 651 aa10.31□□□□□ -0.76
TPM4-207ENST00000588032 SERINC3Q13530 473 aa10.31□□□□□ -0.76
TPM4-207ENST00000588032 SPA17Q15506 151 aa10.31□□□□□ -0.76
TPM4-207ENST00000588032 DUOXA1Q1HG43 343 aa10.31□□□□□ -0.76
TPM4-207ENST00000588032 CARD16Q5EG05 197 aa10.31□□□□□ -0.76
TPM4-207ENST00000588032 C22orf39Q6P5X5 142 aa10.31□□□□□ -0.76
TPM4-207ENST00000588032 SLC23A3Q6PIS1 610 aa10.31□□□□□ -0.76
TPM4-207ENST00000588032 LINGO4Q6UY18 593 aa10.31□□□□□ -0.76
TPM4-207ENST00000588032 Q6ZVU0 165 aa10.31□□□□□ -0.76
TPM4-207ENST00000588032 FAM124AQ86V42 546 aa10.31□□□□□ -0.76
TPM4-207ENST00000588032 ZNF354CQ86Y25 554 aa10.31□□□□□ -0.76
TPM4-207ENST00000588032 CACUL1Q86Y37 369 aa10.31□□□□□ -0.76
TPM4-207ENST00000588032 TMTC1Q8IUR5 882 aa10.31□□□□□ -0.76
TPM4-207ENST00000588032 SLC41A1Q8IVJ1 513 aa10.31□□□□□ -0.76
TPM4-207ENST00000588032 HDDC3Q8N4P3 179 aa10.31□□□□□ -0.76
TPM4-207ENST00000588032 OR2A12Q8NGT7 310 aa10.31□□□□□ -0.76
TPM4-207ENST00000588032 RFFLQ8WZ73 363 aa10.31□□□□□ -0.76
TPM4-207ENST00000588032 DNASE2BQ8WZ79 361 aa10.31□□□□□ -0.76
TPM4-207ENST00000588032 LRIG1Q96JA1 1093 aa10.31□□□□□ -0.76
TPM4-207ENST00000588032 BTBD6Q96KE9 485 aa10.31□□□□□ -0.76
TPM4-207ENST00000588032 KCTD15Q96SI1 283 aaPredicted RBP10.31□□□□□ -0.76
TPM4-207ENST00000588032 PACSIN1Q9BY11 444 aa10.31□□□□□ -0.76
TPM4-207ENST00000588032 NEUROG2Q9H2A3 272 aa10.31□□□□□ -0.76
TPM4-207ENST00000588032 KDM4CQ9H3R0 1056 aa10.31□□□□□ -0.76
TPM4-207ENST00000588032 NOL6Q9H6R4 1146 aaKnown RBP10.31□□□□□ -0.76
TPM4-207ENST00000588032 CD93Q9NPY3 652 aa10.31□□□□□ -0.76
TPM4-207ENST00000588032 CWC15Q9P013 229 aaKnown RBP10.31□□□□□ -0.76
TPM4-207ENST00000588032 RCOR3Q9P2K3 495 aaPredicted RBP10.31□□□□□ -0.76
TPM4-207ENST00000588032 DOCK4Q8N1I0 1966 aa10.3□□□□□ -0.76
TPM4-207ENST00000588032 A0A1W2PP55 124 aa10.3□□□□□ -0.76
TPM4-207ENST00000588032 MEI4A8MW99 385 aa10.3□□□□□ -0.76
TPM4-207ENST00000588032 SMAD6O43541 496 aaKnown RBP10.3□□□□□ -0.76
TPM4-207ENST00000588032 BUB1O43683 1085 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms