RNA–Protein interactions for RNA: ENST00000587339.2

TRIM47-204, Transcript of tripartite motif containing 47, humanhuman

TSL 1 (best)

Gene TRIM47, Length 1,907 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-204ENST00000587339 NAT9Q9BTE0 207 aa20.23■□□□□ 0.83
TRIM47-204ENST00000587339 PCDHA11Q9Y5I1 949 aa20.23■□□□□ 0.83
TRIM47-204ENST00000587339 GRM6O15303 877 aa20.22■□□□□ 0.83
TRIM47-204ENST00000587339 SHOX2O60902 331 aaPredicted RBP20.22■□□□□ 0.83
TRIM47-204ENST00000587339 MT-CYBP00156 380 aaPredicted RBP20.22■□□□□ 0.83
TRIM47-204ENST00000587339 MYL4P12829 197 aa20.22■□□□□ 0.83
TRIM47-204ENST00000587339 IRS1P35568 1242 aa20.22■□□□□ 0.83
TRIM47-204ENST00000587339 ACVRL1P37023 503 aa20.22■□□□□ 0.83
TRIM47-204ENST00000587339 GNGT1P63211 74 aa20.22■□□□□ 0.83
TRIM47-204ENST00000587339 ZXDBP98169 803 aa20.22■□□□□ 0.83
TRIM47-204ENST00000587339 SLC10A7Q0GE19 358 aa20.22■□□□□ 0.83
TRIM47-204ENST00000587339 ARNTL2Q8WYA1 636 aa20.22■□□□□ 0.83
TRIM47-204ENST00000587339 DHRS4Q9BTZ2 278 aa20.22■□□□□ 0.83
TRIM47-204ENST00000587339 MAGEH1Q9H213 219 aa20.22■□□□□ 0.83
TRIM47-204ENST00000587339 CASS4Q9NQ75 786 aa20.22■□□□□ 0.83
TRIM47-204ENST00000587339 BFARQ9NZS9 450 aa20.22■□□□□ 0.83
TRIM47-204ENST00000587339 ZKSCAN7Q9P0L1 754 aaPredicted RBP20.22■□□□□ 0.83
TRIM47-204ENST00000587339 SAMD15Q9P1V8 674 aa20.22■□□□□ 0.83
TRIM47-204ENST00000587339 IKBKGQ9Y6K9 419 aa20.22■□□□□ 0.83
TRIM47-204ENST00000587339 A0A1B0GVM2 712 aa20.21■□□□□ 0.83
TRIM47-204ENST00000587339 TCAF2A6NFQ2 919 aa20.21■□□□□ 0.83
TRIM47-204ENST00000587339 FOXO6A8MYZ6 492 aa20.21■□□□□ 0.83
TRIM47-204ENST00000587339 H3BNC9 293 aa20.21■□□□□ 0.83
TRIM47-204ENST00000587339 AP3B1O00203 1094 aa20.21■□□□□ 0.83
TRIM47-204ENST00000587339 TSPAN3O60637 253 aa20.21■□□□□ 0.83
TRIM47-204ENST00000587339 CA3P07451 260 aa20.21■□□□□ 0.83
TRIM47-204ENST00000587339 KRT15P19012 456 aa20.21■□□□□ 0.83
TRIM47-204ENST00000587339 SGSHP51688 502 aa20.21■□□□□ 0.83
TRIM47-204ENST00000587339 GNA12Q03113 381 aa20.21■□□□□ 0.83
TRIM47-204ENST00000587339 CAMK1Q14012 370 aa20.21■□□□□ 0.83
TRIM47-204ENST00000587339 FAM109BQ6ICB4 259 aaPredicted RBP20.21■□□□□ 0.83
TRIM47-204ENST00000587339 ADGRD1Q6QNK2 874 aa20.21■□□□□ 0.83
TRIM47-204ENST00000587339 CHST9Q7L1S5 443 aa20.21■□□□□ 0.83
TRIM47-204ENST00000587339 RTL10Q7L3V2 364 aa20.21■□□□□ 0.83
TRIM47-204ENST00000587339 PRPF39Q86UA1 669 aaKnown RBP20.21■□□□□ 0.83
TRIM47-204ENST00000587339 SRRM1Q8IYB3 904 aaKnown RBP20.21■□□□□ 0.83
TRIM47-204ENST00000587339 TTC16Q8NEE8 873 aa20.21■□□□□ 0.83
TRIM47-204ENST00000587339 ADAMTS19Q8TE59 1207 aa20.21■□□□□ 0.83
TRIM47-204ENST00000587339 APOL2Q9BQE5 337 aa20.21■□□□□ 0.83
TRIM47-204ENST00000587339 SYBUQ9NX95 663 aa20.21■□□□□ 0.83
TRIM47-204ENST00000587339 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.21■□□□□ 0.83
TRIM47-204ENST00000587339 A0A0D9SEW6 157 aa20.21■□□□□ 0.83
TRIM47-204ENST00000587339 GJA1P17302 382 aa20.21■□□□□ 0.83
TRIM47-204ENST00000587339 PGAM1P18669 254 aa20.21■□□□□ 0.83
TRIM47-204ENST00000587339 PRKCHP24723 683 aa20.21■□□□□ 0.83
TRIM47-204ENST00000587339 GEMP55040 296 aa20.21■□□□□ 0.83
TRIM47-204ENST00000587339 CDH17Q12864 832 aa20.21■□□□□ 0.83
TRIM47-204ENST00000587339 ZNF177Q13360 481 aaPredicted RBP20.21■□□□□ 0.83
TRIM47-204ENST00000587339 TTC39BQ5VTQ0 682 aaPredicted RBP20.21■□□□□ 0.83
TRIM47-204ENST00000587339 NT5MQ9NPB1 228 aa20.21■□□□□ 0.83
TRIM47-204ENST00000587339 MAN1C1Q9NR34 630 aa20.21■□□□□ 0.83
TRIM47-204ENST00000587339 ACTL7BQ9Y614 415 aa20.21■□□□□ 0.83
TRIM47-204ENST00000587339 TRAV19A0A0A6YYK7 116 aa20.2■□□□□ 0.82
TRIM47-204ENST00000587339 SCAMP3O14828 347 aaKnown RBP20.2■□□□□ 0.82
TRIM47-204ENST00000587339 PRAMEF11O60813 436 aa20.2■□□□□ 0.82
TRIM47-204ENST00000587339 RFPL2O75678 378 aa20.2■□□□□ 0.82
TRIM47-204ENST00000587339 C1QAP02745 245 aa20.2■□□□□ 0.82
TRIM47-204ENST00000587339 SLC7A9P82251 487 aa20.2■□□□□ 0.82
TRIM47-204ENST00000587339 IL31Q6EBC2 164 aa20.2■□□□□ 0.82
TRIM47-204ENST00000587339 LRRC6Q86X45 466 aa20.2■□□□□ 0.82
TRIM47-204ENST00000587339 CTAGE3PQ8IX95 158 aa20.2■□□□□ 0.82
TRIM47-204ENST00000587339 TEX26Q8N6G2 289 aa20.2■□□□□ 0.82
TRIM47-204ENST00000587339 IPMKQ8NFU5 416 aa20.2■□□□□ 0.82
TRIM47-204ENST00000587339 MDM1Q8TC05 714 aa20.2■□□□□ 0.82
TRIM47-204ENST00000587339 DCAKDQ8WVC6 231 aa20.2■□□□□ 0.82
TRIM47-204ENST00000587339 SLC44A1Q8WWI5 657 aa20.2■□□□□ 0.82
TRIM47-204ENST00000587339 HCFC1R1Q9NWW0 138 aa20.2■□□□□ 0.82
TRIM47-204ENST00000587339 LSM7Q9UK45 103 aaKnown RBP20.2■□□□□ 0.82
TRIM47-204ENST00000587339 OBSL1O75147 1896 aa20.2■□□□□ 0.82
TRIM47-204ENST00000587339 GREM1O60565 184 aa20.19■□□□□ 0.82
TRIM47-204ENST00000587339 POLBP06746 335 aa20.19■□□□□ 0.82
TRIM47-204ENST00000587339 INHBAP08476 426 aa20.19■□□□□ 0.82
TRIM47-204ENST00000587339 BRAFP15056 766 aa20.19■□□□□ 0.82
TRIM47-204ENST00000587339 CREB1P16220 341 aa20.19■□□□□ 0.82
TRIM47-204ENST00000587339 NUMBP49757 651 aa20.19■□□□□ 0.82
TRIM47-204ENST00000587339 ITKQ08881 620 aa20.19■□□□□ 0.82
TRIM47-204ENST00000587339 LBRQ14739 615 aaKnown RBP20.19■□□□□ 0.82
TRIM47-204ENST00000587339 STXBP5Q5T5C0 1151 aa20.19■□□□□ 0.82
TRIM47-204ENST00000587339 STEAP4Q687X5 459 aa20.19■□□□□ 0.82
TRIM47-204ENST00000587339 TRMT10BQ6PF06 316 aaKnown RBP20.19■□□□□ 0.82
TRIM47-204ENST00000587339 CYS1Q717R9 158 aa20.19■□□□□ 0.82
TRIM47-204ENST00000587339 SETD3Q86TU7 594 aaPredicted RBP20.19■□□□□ 0.82
TRIM47-204ENST00000587339 TRABD2AQ86V40 505 aa20.19■□□□□ 0.82
TRIM47-204ENST00000587339 OR52K2Q8NGK3 314 aa20.19■□□□□ 0.82
TRIM47-204ENST00000587339 SLC25A51Q9H1U9 297 aa20.19■□□□□ 0.82
TRIM47-204ENST00000587339 RHOCP08134 193 aa20.19■□□□□ 0.82
TRIM47-204ENST00000587339 NPY2RP49146 381 aa20.19■□□□□ 0.82
TRIM47-204ENST00000587339 TMCO4Q5TGY1 634 aa20.19■□□□□ 0.82
TRIM47-204ENST00000587339 Q6ZNB5 142 aa20.19■□□□□ 0.82
TRIM47-204ENST00000587339 PPM1NQ8N819 430 aa20.19■□□□□ 0.82
TRIM47-204ENST00000587339 OR7D4Q8NG98 312 aa20.19■□□□□ 0.82
TRIM47-204ENST00000587339 TGS1Q96RS0 853 aaKnown RBP20.19■□□□□ 0.82
TRIM47-204ENST00000587339 TBL1YQ9BQ87 522 aa20.19■□□□□ 0.82
TRIM47-204ENST00000587339 FSD1LQ9BXM9 530 aa20.19■□□□□ 0.82
TRIM47-204ENST00000587339 IL22Q9GZX6 179 aa20.19■□□□□ 0.82
TRIM47-204ENST00000587339 MOCS1Q9NZB8 636 aa20.19■□□□□ 0.82
TRIM47-204ENST00000587339 SENP1Q9P0U3 644 aa20.19■□□□□ 0.82
TRIM47-204ENST00000587339 CHD7Q9P2D1 2997 aa20.19■□□□□ 0.82
TRIM47-204ENST00000587339 TBC1D30Q9Y2I9 924 aa20.19■□□□□ 0.82
TRIM47-204ENST00000587339 ILVBLA1L0T0 632 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms