RNA–Protein interactions for RNA: ENST00000584773.5

SRSF1-208, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5 BASIC

Gene SRSF1, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-208ENST00000584773 PYROXD2Q8N2H3 581 aa18.45■□□□□ 0.54
SRSF1-208ENST00000584773 MCEEQ96PE7 176 aa18.45■□□□□ 0.54
SRSF1-208ENST00000584773 C2orf49Q9BVC5 232 aaPredicted RBP18.45■□□□□ 0.54
SRSF1-208ENST00000584773 OR12D3Q9UGF7 316 aa18.45■□□□□ 0.54
SRSF1-208ENST00000584773 PPM1HQ9ULR3 514 aa18.45■□□□□ 0.54
SRSF1-208ENST00000584773 WASF3Q9UPY6 502 aa18.45■□□□□ 0.54
SRSF1-208ENST00000584773 ANKRD6Q9Y2G4 727 aa18.45■□□□□ 0.54
SRSF1-208ENST00000584773 CHD5Q8TDI0 1954 aa18.44■□□□□ 0.54
SRSF1-208ENST00000584773 MCF2LO15068 1137 aa18.44■□□□□ 0.54
SRSF1-208ENST00000584773 ATMINO43313 823 aaPredicted RBP18.44■□□□□ 0.54
SRSF1-208ENST00000584773 ZMPSTE24O75844 475 aa18.44■□□□□ 0.54
SRSF1-208ENST00000584773 GRIA4P48058 902 aa18.44■□□□□ 0.54
SRSF1-208ENST00000584773 ARF5P84085 180 aa18.44■□□□□ 0.54
SRSF1-208ENST00000584773 IL9RQ01113 521 aa18.44■□□□□ 0.54
SRSF1-208ENST00000584773 OGDHQ02218 1023 aa18.44■□□□□ 0.54
SRSF1-208ENST00000584773 AGBL4Q5VU57 503 aa18.44■□□□□ 0.54
SRSF1-208ENST00000584773 C22orf39Q6P5X5 142 aa18.44■□□□□ 0.54
SRSF1-208ENST00000584773 MCOLN2Q8IZK6 566 aa18.44■□□□□ 0.54
SRSF1-208ENST00000584773 OR2A12Q8NGT7 310 aa18.44■□□□□ 0.54
SRSF1-208ENST00000584773 ATP13A1Q9HD20 1204 aa18.44■□□□□ 0.54
SRSF1-208ENST00000584773 TM7SF3Q9NS93 570 aa18.44■□□□□ 0.54
SRSF1-208ENST00000584773 PPARGC1AQ9UBK2 798 aaKnown RBP18.44■□□□□ 0.54
SRSF1-208ENST00000584773 DNAI1Q9UI46 699 aa18.44■□□□□ 0.54
SRSF1-208ENST00000584773 FRYQ5TBA9 3013 aa18.43■□□□□ 0.54
SRSF1-208ENST00000584773 TBC1D3DA0A087WVF3 549 aa18.43■□□□□ 0.54
SRSF1-208ENST00000584773 TBC1D3IA0A087WXS9 549 aa18.43■□□□□ 0.54
SRSF1-208ENST00000584773 TBC1D3EA0A087X179 549 aa18.43■□□□□ 0.54
SRSF1-208ENST00000584773 TBC1D3KA0A087X1G2 549 aa18.43■□□□□ 0.54
SRSF1-208ENST00000584773 A0A1B0GTH6 734 aa18.43■□□□□ 0.54
SRSF1-208ENST00000584773 ILVBLA1L0T0 632 aa18.43■□□□□ 0.54
SRSF1-208ENST00000584773 TBC1D3FA6NER0 549 aaPredicted RBP18.43■□□□□ 0.54
SRSF1-208ENST00000584773 SIGLEC16A6NMB1 481 aa18.43■□□□□ 0.54
SRSF1-208ENST00000584773 TBC1D3LB9A6J9 549 aa18.43■□□□□ 0.54
SRSF1-208ENST00000584773 ZNF821O75541 412 aaPredicted RBP18.43■□□□□ 0.54
SRSF1-208ENST00000584773 LRIG2O94898 1065 aa18.43■□□□□ 0.54
SRSF1-208ENST00000584773 CER1O95813 267 aa18.43■□□□□ 0.54
SRSF1-208ENST00000584773 TBC1D3HP0C7X1 549 aa18.43■□□□□ 0.54
SRSF1-208ENST00000584773 MAT2AP31153 395 aaKnown RBP18.43■□□□□ 0.54
SRSF1-208ENST00000584773 SHC2P98077 582 aa18.43■□□□□ 0.54
SRSF1-208ENST00000584773 GNA12Q03113 381 aa18.43■□□□□ 0.54
SRSF1-208ENST00000584773 C1QBPQ07021 282 aaKnown RBP18.43■□□□□ 0.54
SRSF1-208ENST00000584773 TEAD4Q15561 434 aa18.43■□□□□ 0.54
SRSF1-208ENST00000584773 ARL13BQ3SXY8 428 aa18.43■□□□□ 0.54
SRSF1-208ENST00000584773 PPP1R15BQ5SWA1 713 aa18.43■□□□□ 0.54
SRSF1-208ENST00000584773 PRAMEF14Q5SWL7 426 aa18.43■□□□□ 0.54
SRSF1-208ENST00000584773 TBC1D3GQ6DHY5 549 aa18.43■□□□□ 0.54
SRSF1-208ENST00000584773 TBC1D3CQ6IPX1 549 aa18.43■□□□□ 0.54
SRSF1-208ENST00000584773 ACAD10Q6JQN1 1059 aa18.43■□□□□ 0.54
SRSF1-208ENST00000584773 LEKR1Q6ZMV7 388 aa18.43■□□□□ 0.54
SRSF1-208ENST00000584773 ADAT2Q7Z6V5 191 aaKnown RBP18.43■□□□□ 0.54
SRSF1-208ENST00000584773 DSG4Q86SJ6 1040 aa18.43■□□□□ 0.54
SRSF1-208ENST00000584773 NLRP14Q86W24 1093 aa18.43■□□□□ 0.54
SRSF1-208ENST00000584773 TBC1D3Q8IZP1 549 aaPredicted RBP18.43■□□□□ 0.54
SRSF1-208ENST00000584773 FAM131CQ96AQ9 280 aa18.43■□□□□ 0.54
SRSF1-208ENST00000584773 ARRDC3Q96B67 414 aa18.43■□□□□ 0.54
SRSF1-208ENST00000584773 CBX8Q9HC52 389 aa18.43■□□□□ 0.54
SRSF1-208ENST00000584773 OSGEPQ9NPF4 335 aa18.43■□□□□ 0.54
SRSF1-208ENST00000584773 BTBD3Q9Y2F9 522 aa18.43■□□□□ 0.54
SRSF1-208ENST00000584773 FCF1Q9Y324 198 aaKnown RBP18.43■□□□□ 0.54
SRSF1-208ENST00000584773 C1QTNF3-AMACRE9PGA6 284 aa18.42■□□□□ 0.54
SRSF1-208ENST00000584773 H0Y8X5 98 aa18.42■□□□□ 0.54
SRSF1-208ENST00000584773 HYAL3O43820 417 aaPredicted RBP18.42■□□□□ 0.54
SRSF1-208ENST00000584773 PLEKP08567 350 aaPredicted RBP18.42■□□□□ 0.54
SRSF1-208ENST00000584773 TNFAIP3P21580 790 aa18.42■□□□□ 0.54
SRSF1-208ENST00000584773 CHRNA3P32297 505 aa18.42■□□□□ 0.54
SRSF1-208ENST00000584773 TAS2R38P59533 333 aa18.42■□□□□ 0.54
SRSF1-208ENST00000584773 SFSWAPQ12872 951 aaKnown RBP18.42■□□□□ 0.54
SRSF1-208ENST00000584773 SLC14A1Q13336 389 aa18.42■□□□□ 0.54
SRSF1-208ENST00000584773 ASIC2Q16515 512 aa18.42■□□□□ 0.54
SRSF1-208ENST00000584773 SCYL2Q6P3W7 929 aa18.42■□□□□ 0.54
SRSF1-208ENST00000584773 LUZP1Q86V48 1076 aa18.42■□□□□ 0.54
SRSF1-208ENST00000584773 GRIN3AQ8TCU5 1115 aa18.42■□□□□ 0.54
SRSF1-208ENST00000584773 OSBPL2Q9H1P3 480 aa18.42■□□□□ 0.54
SRSF1-208ENST00000584773 HAUS4Q9H6D7 363 aa18.42■□□□□ 0.54
SRSF1-208ENST00000584773 AASDHPPTQ9NRN7 309 aa18.42■□□□□ 0.54
SRSF1-208ENST00000584773 TMEM51Q9NW97 253 aa18.42■□□□□ 0.54
SRSF1-208ENST00000584773 CEP295Q9C0D2 2601 aa18.42■□□□□ 0.54
SRSF1-208ENST00000584773 EPG5Q9HCE0 2579 aa18.41■□□□□ 0.54
SRSF1-208ENST00000584773 KPNA3O00505 521 aaPredicted RBP18.41■□□□□ 0.54
SRSF1-208ENST00000584773 ALOX15BO15296 676 aa18.41■□□□□ 0.54
SRSF1-208ENST00000584773 PLRG1O43660 514 aaKnown RBP18.41■□□□□ 0.54
SRSF1-208ENST00000584773 CBFA2T3O75081 653 aa18.41■□□□□ 0.54
SRSF1-208ENST00000584773 CD160O95971 181 aa18.41■□□□□ 0.54
SRSF1-208ENST00000584773 CTSKP43235 329 aa18.41■□□□□ 0.54
SRSF1-208ENST00000584773 SERPINH1P50454 418 aaKnown RBP18.41■□□□□ 0.54
SRSF1-208ENST00000584773 CCR5P51681 352 aa18.41■□□□□ 0.54
SRSF1-208ENST00000584773 ZNF143P52747 638 aaPredicted RBP18.41■□□□□ 0.54
SRSF1-208ENST00000584773 RACK1P63244 317 aaKnown RBP18.41■□□□□ 0.54
SRSF1-208ENST00000584773 NRG1Q02297 640 aaPredicted RBP18.41■□□□□ 0.54
SRSF1-208ENST00000584773 FILIP1LQ4L180 1135 aa18.41■□□□□ 0.54
SRSF1-208ENST00000584773 ACBD5Q5T8D3 534 aaPredicted RBP18.41■□□□□ 0.54
SRSF1-208ENST00000584773 PIP5KL1Q5T9C9 394 aa18.41■□□□□ 0.54
SRSF1-208ENST00000584773 FAM46CQ5VWP2 391 aa18.41■□□□□ 0.54
SRSF1-208ENST00000584773 IL27RAQ6UWB1 636 aa18.41■□□□□ 0.54
SRSF1-208ENST00000584773 DPY19L3Q6ZPD9 716 aa18.41■□□□□ 0.54
SRSF1-208ENST00000584773 ZNF571Q7Z3V5 609 aaPredicted RBP18.41■□□□□ 0.54
SRSF1-208ENST00000584773 NETO2Q8NC67 525 aa18.41■□□□□ 0.54
SRSF1-208ENST00000584773 SETD7Q8WTS6 366 aaKnown RBP18.41■□□□□ 0.54
SRSF1-208ENST00000584773 NTAN1Q96AB6 310 aa18.41■□□□□ 0.54
SRSF1-208ENST00000584773 TBC1D31Q96DN5 1066 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms