RNA–Protein interactions for RNA: ENST00000582717.5

GGA3-214, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 2 BASIC

Gene GGA3, Length 2,255 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-214ENST00000582717 HSP90AA5PQ58FG0 334 aa13.9□□□□□ -0.18
GGA3-214ENST00000582717 SYPL2Q5VXT5 272 aa13.9□□□□□ -0.18
GGA3-214ENST00000582717 ARMC3Q5W041 872 aa13.9□□□□□ -0.18
GGA3-214ENST00000582717 NCBP2-AS2Q69YL0 99 aa13.9□□□□□ -0.18
GGA3-214ENST00000582717 MAVSQ7Z434 540 aa13.9□□□□□ -0.18
GGA3-214ENST00000582717 SIX6OS1Q8N1H7 587 aa13.9□□□□□ -0.18
GGA3-214ENST00000582717 TMEM86AQ8N2M4 240 aa13.9□□□□□ -0.18
GGA3-214ENST00000582717 ZMIZ2Q8NF64 920 aa13.9□□□□□ -0.18
GGA3-214ENST00000582717 TFB1MQ8WVM0 346 aaKnown RBP13.9□□□□□ -0.18
GGA3-214ENST00000582717 PCED1BQ96HM7 432 aa13.9□□□□□ -0.18
GGA3-214ENST00000582717 NPY6RQ99463 290 aa13.9□□□□□ -0.18
GGA3-214ENST00000582717 SMOQ99835 787 aa13.9□□□□□ -0.18
GGA3-214ENST00000582717 CYP4F11Q9HBI6 524 aa13.9□□□□□ -0.18
GGA3-214ENST00000582717 COX16Q9P0S2 106 aa13.9□□□□□ -0.18
GGA3-214ENST00000582717 PRPF19Q9UMS4 504 aaKnown RBP13.9□□□□□ -0.18
GGA3-214ENST00000582717 TDRD15B5MCY1 1934 aaKnown RBP13.9□□□□□ -0.18
GGA3-214ENST00000582717 TMEM88BA6NKF7 163 aa13.89□□□□□ -0.19
GGA3-214ENST00000582717 CAPN15O75808 1086 aa13.89□□□□□ -0.19
GGA3-214ENST00000582717 MLNP12872 115 aa13.89□□□□□ -0.19
GGA3-214ENST00000582717 ALDH1A3P47895 512 aa13.89□□□□□ -0.19
GGA3-214ENST00000582717 LHX1P48742 406 aa13.89□□□□□ -0.19
GGA3-214ENST00000582717 ABCE1P61221 599 aaKnown RBP13.89□□□□□ -0.19
GGA3-214ENST00000582717 NIPAL4Q0D2K0 466 aa13.89□□□□□ -0.19
GGA3-214ENST00000582717 PDE1CQ14123 709 aaPredicted RBP13.89□□□□□ -0.19
GGA3-214ENST00000582717 DSC3Q14574 896 aa13.89□□□□□ -0.19
GGA3-214ENST00000582717 LPIN1Q14693 890 aa13.89□□□□□ -0.19
GGA3-214ENST00000582717 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.89□□□□□ -0.19
GGA3-214ENST00000582717 PAN2Q504Q3 1202 aaKnown RBP13.89□□□□□ -0.19
GGA3-214ENST00000582717 METTL21CQ5VZV1 264 aa13.89□□□□□ -0.19
GGA3-214ENST00000582717 B3GNT6Q6ZMB0 384 aa13.89□□□□□ -0.19
GGA3-214ENST00000582717 TMC7Q7Z402 723 aa13.89□□□□□ -0.19
GGA3-214ENST00000582717 BNIPLQ7Z465 357 aa13.89□□□□□ -0.19
GGA3-214ENST00000582717 CTU1Q7Z7A3 348 aaKnown RBP13.89□□□□□ -0.19
GGA3-214ENST00000582717 PQLC1Q8N2U9 271 aa13.89□□□□□ -0.19
GGA3-214ENST00000582717 NT5C3BQ969T7 300 aa13.89□□□□□ -0.19
GGA3-214ENST00000582717 SLC2A13Q96QE2 648 aa13.89□□□□□ -0.19
GGA3-214ENST00000582717 ULBP1Q9BZM6 244 aa13.89□□□□□ -0.19
GGA3-214ENST00000582717 CIDEBQ9UHD4 219 aa13.89□□□□□ -0.19
GGA3-214ENST00000582717 BCAP29Q9UHQ4 241 aa13.89□□□□□ -0.19
GGA3-214ENST00000582717 RAB26Q9ULW5 256 aa13.89□□□□□ -0.19
GGA3-214ENST00000582717 CDY1Q9Y6F8 540 aa13.89□□□□□ -0.19
GGA3-214ENST00000582717 ZNF195O14628 629 aa13.89□□□□□ -0.19
GGA3-214ENST00000582717 POMCP01189 267 aa13.89□□□□□ -0.19
GGA3-214ENST00000582717 ALDOAP04075 364 aaKnown RBP13.89□□□□□ -0.19
GGA3-214ENST00000582717 COX4I1P13073 169 aa13.89□□□□□ -0.19
GGA3-214ENST00000582717 ZFXP17010 805 aaPredicted RBP13.89□□□□□ -0.19
GGA3-214ENST00000582717 MX2P20592 715 aa13.89□□□□□ -0.19
GGA3-214ENST00000582717 NOS2P35228 1153 aa13.89□□□□□ -0.19
GGA3-214ENST00000582717 SEMA5AQ13591 1074 aa13.89□□□□□ -0.19
GGA3-214ENST00000582717 RARS2Q5T160 578 aaKnown RBP13.89□□□□□ -0.19
GGA3-214ENST00000582717 ZFP1Q6P2D0 407 aa13.89□□□□□ -0.19
GGA3-214ENST00000582717 C16orf46Q6P387 395 aa13.89□□□□□ -0.19
GGA3-214ENST00000582717 FBXL19Q6PCT2 694 aa13.89□□□□□ -0.19
GGA3-214ENST00000582717 PACS1Q6VY07 963 aa13.89□□□□□ -0.19
GGA3-214ENST00000582717 HPS6Q86YV9 775 aa13.89□□□□□ -0.19
GGA3-214ENST00000582717 MPP5Q8N3R9 675 aa13.89□□□□□ -0.19
GGA3-214ENST00000582717 MPP4Q96JB8 637 aa13.89□□□□□ -0.19
GGA3-214ENST00000582717 SERPINI1Q99574 410 aa13.89□□□□□ -0.19
GGA3-214ENST00000582717 RTP3Q9BQQ7 232 aa13.89□□□□□ -0.19
GGA3-214ENST00000582717 MRPS26Q9BYN8 205 aaKnown RBP13.89□□□□□ -0.19
GGA3-214ENST00000582717 RHOBTB2Q9BYZ6 727 aa13.89□□□□□ -0.19
GGA3-214ENST00000582717 TRMT13Q9NUP7 481 aaKnown RBP13.89□□□□□ -0.19
GGA3-214ENST00000582717 RNF186Q9NXI6 227 aa13.89□□□□□ -0.19
GGA3-214ENST00000582717 DTLQ9NZJ0 730 aa13.89□□□□□ -0.19
GGA3-214ENST00000582717 INPP5FQ9Y2H2 1132 aa13.89□□□□□ -0.19
GGA3-214ENST00000582717 M0QYT0 321 aa13.88□□□□□ -0.19
GGA3-214ENST00000582717 TPP1O14773 563 aa13.88□□□□□ -0.19
GGA3-214ENST00000582717 ZNF623O75123 536 aa13.88□□□□□ -0.19
GGA3-214ENST00000582717 TOP3BO95985 862 aaKnown RBP13.88□□□□□ -0.19
GGA3-214ENST00000582717 CLPTM1O96005 669 aa13.88□□□□□ -0.19
GGA3-214ENST00000582717 FYNP06241 537 aa13.88□□□□□ -0.19
GGA3-214ENST00000582717 ITGA2BP08514 1039 aa13.88□□□□□ -0.19
GGA3-214ENST00000582717 NCF2P19878 526 aaPredicted RBP13.88□□□□□ -0.19
GGA3-214ENST00000582717 RPL9P32969 192 aaKnown RBP13.88□□□□□ -0.19
GGA3-214ENST00000582717 KCNT2Q6UVM3 1135 aa13.88□□□□□ -0.19
GGA3-214ENST00000582717 FRMD7Q6ZUT3 714 aa13.88□□□□□ -0.19
GGA3-214ENST00000582717 C10orf107Q8IVU9 208 aa13.88□□□□□ -0.19
GGA3-214ENST00000582717 AHI1Q8N157 1196 aa13.88□□□□□ -0.19
GGA3-214ENST00000582717 DCUN1D1Q96GG9 259 aa13.88□□□□□ -0.19
GGA3-214ENST00000582717 QKIQ96PU8 341 aaKnown RBP eCLIP13.88□□□□□ -0.19
GGA3-214ENST00000582717 OCEL1Q9H607 264 aa13.88□□□□□ -0.19
GGA3-214ENST00000582717 SUDS3Q9H7L9 328 aaPredicted RBP13.88□□□□□ -0.19
GGA3-214ENST00000582717 PNPOQ9NVS9 261 aa13.88□□□□□ -0.19
GGA3-214ENST00000582717 STK39Q9UEW8 545 aa13.88□□□□□ -0.19
GGA3-214ENST00000582717 YJEFN3A6XGL0 299 aa13.88□□□□□ -0.19
GGA3-214ENST00000582717 METTL18O95568 372 aa13.88□□□□□ -0.19
GGA3-214ENST00000582717 RALBP11234 206 aa13.88□□□□□ -0.19
GGA3-214ENST00000582717 HSPA13P48723 471 aa13.88□□□□□ -0.19
GGA3-214ENST00000582717 NR2C2P49116 596 aa13.88□□□□□ -0.19
GGA3-214ENST00000582717 DAOAP59103 153 aa13.88□□□□□ -0.19
GGA3-214ENST00000582717 NME3Q13232 169 aa13.88□□□□□ -0.19
GGA3-214ENST00000582717 TRIM71Q2Q1W2 868 aaKnown RBP13.88□□□□□ -0.19
GGA3-214ENST00000582717 TCHHL1Q5QJ38 904 aaPredicted RBP13.88□□□□□ -0.19
GGA3-214ENST00000582717 NETO2Q8NC67 525 aa13.88□□□□□ -0.19
GGA3-214ENST00000582717 IRGQQ8WZA9 623 aa13.88□□□□□ -0.19
GGA3-214ENST00000582717 NMD3Q96D46 503 aaKnown RBP13.88□□□□□ -0.19
GGA3-214ENST00000582717 ADAM2Q99965 735 aa13.88□□□□□ -0.19
GGA3-214ENST00000582717 NAT9Q9BTE0 207 aa13.88□□□□□ -0.19
GGA3-214ENST00000582717 ZNF696Q9H7X3 374 aa13.88□□□□□ -0.19
GGA3-214ENST00000582717 PIGVQ9NUD9 493 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms