RNA–Protein interactions for RNA: ENST00000580108.1

DDX42-211, Transcript of DEAD-box helicase 42, humanhuman

TSL 3

Gene DDX42, Length 545 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX42-211ENST00000580108 BIRC3Q13489 604 aa4.22□□□□□ -1.73
DDX42-211ENST00000580108 ALCAMQ13740 583 aa4.22□□□□□ -1.73
DDX42-211ENST00000580108 VEPH1Q14D04 833 aa4.22□□□□□ -1.73
DDX42-211ENST00000580108 TAF12Q16514 161 aa4.22□□□□□ -1.73
DDX42-211ENST00000580108 KNOP1Q1ED39 458 aaKnown RBP4.22□□□□□ -1.73
DDX42-211ENST00000580108 ISM2Q6H9L7 571 aa4.22□□□□□ -1.73
DDX42-211ENST00000580108 CNNM4Q6P4Q7 775 aa4.22□□□□□ -1.73
DDX42-211ENST00000580108 FAM171BQ6P995 826 aa4.22□□□□□ -1.73
DDX42-211ENST00000580108 KRBA2Q6ZNG9 492 aa4.22□□□□□ -1.73
DDX42-211ENST00000580108 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.22□□□□□ -1.73
DDX42-211ENST00000580108 SPATA2LQ8IUW3 424 aaPredicted RBP4.22□□□□□ -1.73
DDX42-211ENST00000580108 WDR49Q8IV35 697 aa4.22□□□□□ -1.73
DDX42-211ENST00000580108 C1orf210Q8IVY1 113 aa4.22□□□□□ -1.73
DDX42-211ENST00000580108 MFSD6LQ8IWD5 586 aa4.22□□□□□ -1.73
DDX42-211ENST00000580108 REXO1L1PQ8IX06 675 aa4.22□□□□□ -1.73
DDX42-211ENST00000580108 CEP57L1Q8IYX8 460 aa4.22□□□□□ -1.73
DDX42-211ENST00000580108 DCP1BQ8IZD4 617 aaKnown RBP4.22□□□□□ -1.73
DDX42-211ENST00000580108 ADSSL1Q8N142 457 aa4.22□□□□□ -1.73
DDX42-211ENST00000580108 THEM5Q8N1Q8 247 aa4.22□□□□□ -1.73
DDX42-211ENST00000580108 LRRC52Q8N7C0 313 aa4.22□□□□□ -1.73
DDX42-211ENST00000580108 ARL14EPQ8N8R7 260 aaPredicted RBP4.22□□□□□ -1.73
DDX42-211ENST00000580108 XXYLT1Q8NBI6 393 aa4.22□□□□□ -1.73
DDX42-211ENST00000580108 OR6B3Q8NGW1 331 aa4.22□□□□□ -1.73
DDX42-211ENST00000580108 SPPL2BQ8TCT7 592 aa4.22□□□□□ -1.73
DDX42-211ENST00000580108 SH3RF2Q8TEC5 729 aa4.22□□□□□ -1.73
DDX42-211ENST00000580108 PARD3BQ8TEW8 1205 aa4.22□□□□□ -1.73
DDX42-211ENST00000580108 CACTINQ8WUQ7 758 aaKnown RBP4.22□□□□□ -1.73
DDX42-211ENST00000580108 HNRNPLLQ8WVV9 542 aaKnown RBP4.22□□□□□ -1.73
DDX42-211ENST00000580108 FAM3CQ92520 227 aa4.22□□□□□ -1.73
DDX42-211ENST00000580108 ERLEC1Q96DZ1 483 aa4.22□□□□□ -1.73
DDX42-211ENST00000580108 PCED1BQ96HM7 432 aa4.22□□□□□ -1.73
DDX42-211ENST00000580108 TWNKQ96RR1 684 aa4.22□□□□□ -1.73
DDX42-211ENST00000580108 LMF1Q96S06 567 aa4.22□□□□□ -1.73
DDX42-211ENST00000580108 KCNK16Q96T55 309 aa4.22□□□□□ -1.73
DDX42-211ENST00000580108 MMS19Q96T76 1030 aa4.22□□□□□ -1.73
DDX42-211ENST00000580108 KCNJ15Q99712 375 aa4.22□□□□□ -1.73
DDX42-211ENST00000580108 TACO1Q9BSH4 297 aaKnown RBP4.22□□□□□ -1.73
DDX42-211ENST00000580108 B3GNT5Q9BYG0 378 aa4.22□□□□□ -1.73
DDX42-211ENST00000580108 KCNH6Q9H252 994 aa4.22□□□□□ -1.73
DDX42-211ENST00000580108 CUEDC2Q9H467 287 aa4.22□□□□□ -1.73
DDX42-211ENST00000580108 EBF3Q9H4W6 596 aa4.22□□□□□ -1.73
DDX42-211ENST00000580108 TASP1Q9H6P5 420 aa4.22□□□□□ -1.73
DDX42-211ENST00000580108 TMEM206Q9H813 350 aa4.22□□□□□ -1.73
DDX42-211ENST00000580108 LMAN1LQ9HAT1 526 aa4.22□□□□□ -1.73
DDX42-211ENST00000580108 TRPV4Q9HBA0 871 aa4.22□□□□□ -1.73
DDX42-211ENST00000580108 APOBEC3GQ9HC16 384 aaKnown RBP4.22□□□□□ -1.73
DDX42-211ENST00000580108 FBRSL1Q9HCM7 1045 aaKnown RBP4.22□□□□□ -1.73
DDX42-211ENST00000580108 ZDHHC4Q9NPG8 344 aa4.22□□□□□ -1.73
DDX42-211ENST00000580108 ARHGEF4Q9NR80 690 aa4.22□□□□□ -1.73
DDX42-211ENST00000580108 ST7Q9NRC1 585 aa4.22□□□□□ -1.73
DDX42-211ENST00000580108 GKN1Q9NS71 199 aa4.22□□□□□ -1.73
DDX42-211ENST00000580108 DMAC2Q9NW81 257 aa4.22□□□□□ -1.73
DDX42-211ENST00000580108 GDAP2Q9NXN4 497 aa4.22□□□□□ -1.73
DDX42-211ENST00000580108 ITGA11Q9UKX5 1188 aa4.22□□□□□ -1.73
DDX42-211ENST00000580108 DSEQ9UL01 958 aa4.22□□□□□ -1.73
DDX42-211ENST00000580108 ZFR2Q9UPR6 939 aaKnown RBP4.22□□□□□ -1.73
DDX42-211ENST00000580108 WNT6Q9Y6F9 365 aa4.22□□□□□ -1.73
DDX42-211ENST00000580108 ZFP37Q9Y6Q3 630 aaPredicted RBP4.22□□□□□ -1.73
DDX42-211ENST00000580108 SPTBN2O15020 2390 aa4.22□□□□□ -1.73
DDX42-211ENST00000580108 UBE4BO95155 1302 aa4.21□□□□□ -1.73
DDX42-211ENST00000580108 FRYLO94915 3013 aa4.21□□□□□ -1.74
DDX42-211ENST00000580108 FAM237AA0A1B0GTK4 181 aa4.21□□□□□ -1.74
DDX42-211ENST00000580108 PVALEFA0A1B0GWK0 134 aa4.21□□□□□ -1.74
DDX42-211ENST00000580108 BLACEA4D250 179 aa4.21□□□□□ -1.74
DDX42-211ENST00000580108 PROB1E7EW31 1015 aa4.21□□□□□ -1.74
DDX42-211ENST00000580108 SPECC1L-ADORA2AF8WAN1 911 aa4.21□□□□□ -1.74
DDX42-211ENST00000580108 MDM4O15151 490 aa4.21□□□□□ -1.74
DDX42-211ENST00000580108 CHADO15335 359 aa4.21□□□□□ -1.74
DDX42-211ENST00000580108 AKAP3O75969 853 aa4.21□□□□□ -1.74
DDX42-211ENST00000580108 BEST1O76090 585 aa4.21□□□□□ -1.74
DDX42-211ENST00000580108 ZNF202O95125 648 aa4.21□□□□□ -1.74
DDX42-211ENST00000580108 EGFP01133 1207 aa4.21□□□□□ -1.74
DDX42-211ENST00000580108 C4BPAP04003 597 aaKnown RBP4.21□□□□□ -1.74
DDX42-211ENST00000580108 ENO2P09104 434 aaPredicted RBP4.21□□□□□ -1.74
DDX42-211ENST00000580108 CHRNB1P11230 501 aa4.21□□□□□ -1.74
DDX42-211ENST00000580108 TDGF1P13385 188 aa4.21□□□□□ -1.74
DDX42-211ENST00000580108 PTPN1P18031 435 aaKnown RBP4.21□□□□□ -1.74
DDX42-211ENST00000580108 SCP2P22307 547 aa4.21□□□□□ -1.74
DDX42-211ENST00000580108 ADORA2BP29275 332 aa4.21□□□□□ -1.74
DDX42-211ENST00000580108 GNL1P36915 607 aaPredicted RBP4.21□□□□□ -1.74
DDX42-211ENST00000580108 PNPLA4P41247 253 aa4.21□□□□□ -1.74
DDX42-211ENST00000580108 GCLMP48507 274 aa4.21□□□□□ -1.74
DDX42-211ENST00000580108 FNTBP49356 437 aa4.21□□□□□ -1.74
DDX42-211ENST00000580108 TUFMP49411 452 aaKnown RBP4.21□□□□□ -1.74
DDX42-211ENST00000580108 KPNA1P52294 538 aaPredicted RBP4.21□□□□□ -1.74
DDX42-211ENST00000580108 TNNC1P63316 161 aa4.21□□□□□ -1.74
DDX42-211ENST00000580108 KRT85P78386 507 aa4.21□□□□□ -1.74
DDX42-211ENST00000580108 AMPD3Q01432 767 aa4.21□□□□□ -1.74
DDX42-211ENST00000580108 PPP3CAQ08209 521 aa4.21□□□□□ -1.74
DDX42-211ENST00000580108 TRPC3Q13507 836 aa4.21□□□□□ -1.74
DDX42-211ENST00000580108 CCDC6Q16204 474 aa4.21□□□□□ -1.74
DDX42-211ENST00000580108 ZNF699Q32M78 642 aa4.21□□□□□ -1.74
DDX42-211ENST00000580108 WDR72Q3MJ13 1102 aa4.21□□□□□ -1.74
DDX42-211ENST00000580108 FSTL4Q6MZW2 842 aa4.21□□□□□ -1.74
DDX42-211ENST00000580108 ZNF852Q6ZMS4 543 aa4.21□□□□□ -1.74
DDX42-211ENST00000580108 PAQR9Q6ZVX9 377 aa4.21□□□□□ -1.74
DDX42-211ENST00000580108 STXBP4Q6ZWJ1 553 aa4.21□□□□□ -1.74
DDX42-211ENST00000580108 USP51Q70EK9 711 aa4.21□□□□□ -1.74
DDX42-211ENST00000580108 RTL10Q7L3V2 364 aa4.21□□□□□ -1.74
DDX42-211ENST00000580108 DPH6Q7L8W6 267 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms