RNA–Protein interactions for RNA: ENST00000580019.1

KPNB1-208, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2

Gene KPNB1, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-208ENST00000580019 CMTM4Q8IZR5 234 aa3.31□□□□□ -1.88
KPNB1-208ENST00000580019 SCML4Q8N228 414 aa3.31□□□□□ -1.88
KPNB1-208ENST00000580019 LRRC71Q8N4P6 559 aa3.31□□□□□ -1.88
KPNB1-208ENST00000580019 WDTC1Q8N5D0 677 aa3.31□□□□□ -1.88
KPNB1-208ENST00000580019 SYT2Q8N9I0 419 aaPredicted RBP3.31□□□□□ -1.88
KPNB1-208ENST00000580019 FAM71DQ8N9W8 422 aa3.31□□□□□ -1.88
KPNB1-208ENST00000580019 TDRD5Q8NAT2 981 aaKnown RBP3.31□□□□□ -1.88
KPNB1-208ENST00000580019 PLA2G15Q8NCC3 412 aa3.31□□□□□ -1.88
KPNB1-208ENST00000580019 PIK3C3Q8NEB9 887 aa3.31□□□□□ -1.88
KPNB1-208ENST00000580019 LILRB1Q8NHL6 650 aaPredicted RBP3.31□□□□□ -1.88
KPNB1-208ENST00000580019 ARHGEF2Q92974 986 aaKnown RBP3.31□□□□□ -1.88
KPNB1-208ENST00000580019 ATP6V0A1Q93050 837 aa3.31□□□□□ -1.88
KPNB1-208ENST00000580019 SCAMP4Q969E2 229 aa3.31□□□□□ -1.88
KPNB1-208ENST00000580019 FAM162AQ96A26 154 aa3.31□□□□□ -1.88
KPNB1-208ENST00000580019 EXOC4Q96A65 974 aa3.31□□□□□ -1.88
KPNB1-208ENST00000580019 VPS33AQ96AX1 596 aa3.31□□□□□ -1.88
KPNB1-208ENST00000580019 KIF1BPQ96EK5 621 aa3.31□□□□□ -1.88
KPNB1-208ENST00000580019 PGAP3Q96FM1 320 aaPredicted RBP3.31□□□□□ -1.88
KPNB1-208ENST00000580019 SIPA1Q96FS4 1042 aa3.31□□□□□ -1.88
KPNB1-208ENST00000580019 CMTM3Q96MX0 182 aa3.31□□□□□ -1.88
KPNB1-208ENST00000580019 LENG8Q96PV6 779 aaPredicted RBP3.31□□□□□ -1.88
KPNB1-208ENST00000580019 CD180Q99467 661 aa3.31□□□□□ -1.88
KPNB1-208ENST00000580019 LBHD1Q9BQE6 289 aaPredicted RBP3.31□□□□□ -1.88
KPNB1-208ENST00000580019 THUMPD3Q9BV44 507 aaKnown RBP3.31□□□□□ -1.88
KPNB1-208ENST00000580019 IL21RQ9HBE5 538 aa3.31□□□□□ -1.88
KPNB1-208ENST00000580019 RXFP3Q9NSD7 469 aa3.31□□□□□ -1.88
KPNB1-208ENST00000580019 DECR2Q9NUI1 292 aa3.31□□□□□ -1.88
KPNB1-208ENST00000580019 GIMAP4Q9NUV9 329 aa3.31□□□□□ -1.88
KPNB1-208ENST00000580019 TBCCD1Q9NVR7 557 aa3.31□□□□□ -1.88
KPNB1-208ENST00000580019 BEX4Q9NWD9 120 aaPredicted RBP3.31□□□□□ -1.88
KPNB1-208ENST00000580019 TRMT1Q9NXH9 659 aaKnown RBP3.31□□□□□ -1.88
KPNB1-208ENST00000580019 KCND2Q9NZV8 630 aa3.31□□□□□ -1.88
KPNB1-208ENST00000580019 JKAMPQ9P055 326 aa3.31□□□□□ -1.88
KPNB1-208ENST00000580019 HCN3Q9P1Z3 774 aa3.31□□□□□ -1.88
KPNB1-208ENST00000580019 CPSF2Q9P2I0 782 aaKnown RBP3.31□□□□□ -1.88
KPNB1-208ENST00000580019 SUCLA2Q9P2R7 463 aaPredicted RBP3.31□□□□□ -1.88
KPNB1-208ENST00000580019 ARPP21Q9UBL0 812 aaPredicted RBP3.31□□□□□ -1.88
KPNB1-208ENST00000580019 UBA2Q9UBT2 640 aaPredicted RBP3.31□□□□□ -1.88
KPNB1-208ENST00000580019 SLC25A10Q9UBX3 287 aaPredicted RBP3.31□□□□□ -1.88
KPNB1-208ENST00000580019 LIMA1Q9UHB6 759 aaKnown RBP3.31□□□□□ -1.88
KPNB1-208ENST00000580019 MAGEL2Q9UJ55 1249 aa3.31□□□□□ -1.88
KPNB1-208ENST00000580019 SARDHQ9UL12 918 aa3.31□□□□□ -1.88
KPNB1-208ENST00000580019 RABL2BQ9UNT1 228 aa3.31□□□□□ -1.88
KPNB1-208ENST00000580019 ATP11BQ9Y2G3 1177 aa3.31□□□□□ -1.88
KPNB1-208ENST00000580019 ATP6V0A2Q9Y487 856 aa3.31□□□□□ -1.88
KPNB1-208ENST00000580019 CHST2Q9Y4C5 530 aa3.31□□□□□ -1.88
KPNB1-208ENST00000580019 ENTPD2Q9Y5L3 495 aa3.31□□□□□ -1.88
KPNB1-208ENST00000580019 KCNE2Q9Y6J6 123 aa3.31□□□□□ -1.88
KPNB1-208ENST00000580019 SHANK2Q9UPX8 1470 aa3.3□□□□□ -1.88
KPNB1-208ENST00000580019 FHOD3Q2V2M9 1422 aa3.3□□□□□ -1.88
KPNB1-208ENST00000580019 GOLGA6L10A0A0M3HER8 536 aa3.3□□□□□ -1.88
KPNB1-208ENST00000580019 CCDC151A5D8V7 595 aa3.3□□□□□ -1.88
KPNB1-208ENST00000580019 LIPT2A6NK58 231 aa3.3□□□□□ -1.88
KPNB1-208ENST00000580019 ZNF785A8K8V0 405 aa3.3□□□□□ -1.88
KPNB1-208ENST00000580019 M0QYG6 137 aa3.3□□□□□ -1.88
KPNB1-208ENST00000580019 PLOD2O00469 737 aa3.3□□□□□ -1.88
KPNB1-208ENST00000580019 KIAA0391O15091 583 aaKnown RBP3.3□□□□□ -1.88
KPNB1-208ENST00000580019 RGS10O43665 173 aa3.3□□□□□ -1.88
KPNB1-208ENST00000580019 STX6O43752 255 aa3.3□□□□□ -1.88
KPNB1-208ENST00000580019 RRP9O43818 475 aaKnown RBP3.3□□□□□ -1.88
KPNB1-208ENST00000580019 EXOC3O60645 756 aa3.3□□□□□ -1.88
KPNB1-208ENST00000580019 KERAO60938 352 aa3.3□□□□□ -1.88
KPNB1-208ENST00000580019 TAF5LO75529 589 aa3.3□□□□□ -1.88
KPNB1-208ENST00000580019 ITGA10O75578 1167 aa3.3□□□□□ -1.88
KPNB1-208ENST00000580019 RPP40O75818 363 aaKnown RBP3.3□□□□□ -1.88
KPNB1-208ENST00000580019 SEC14L2O76054 403 aa3.3□□□□□ -1.88
KPNB1-208ENST00000580019 STC2O76061 302 aa3.3□□□□□ -1.88
KPNB1-208ENST00000580019 ALDH1A2O94788 518 aa3.3□□□□□ -1.88
KPNB1-208ENST00000580019 GUCA1CO95843 209 aa3.3□□□□□ -1.88
KPNB1-208ENST00000580019 SLC4A1P02730 911 aa3.3□□□□□ -1.88
KPNB1-208ENST00000580019 EIF2S1P05198 315 aaKnown RBP3.3□□□□□ -1.88
KPNB1-208ENST00000580019 SNRNP70P08621 437 aaKnown RBP3.3□□□□□ -1.88
KPNB1-208ENST00000580019 CCDC175P0C221 793 aa3.3□□□□□ -1.88
KPNB1-208ENST00000580019 RAP2AP10114 183 aa3.3□□□□□ -1.88
KPNB1-208ENST00000580019 PIM1P11309 404 aaPredicted RBP3.3□□□□□ -1.88
KPNB1-208ENST00000580019 RARGP13631 454 aa3.3□□□□□ -1.88
KPNB1-208ENST00000580019 EEF2P13639 858 aaKnown RBP3.3□□□□□ -1.88
KPNB1-208ENST00000580019 KCNA2P16389 499 aa3.3□□□□□ -1.88
KPNB1-208ENST00000580019 MAPK3P27361 379 aaPredicted RBP3.3□□□□□ -1.88
KPNB1-208ENST00000580019 CCKARP32238 428 aa3.3□□□□□ -1.88
KPNB1-208ENST00000580019 HSD17B4P51659 736 aa3.3□□□□□ -1.88
KPNB1-208ENST00000580019 ZNF135P52742 658 aaPredicted RBP3.3□□□□□ -1.88
KPNB1-208ENST00000580019 POLGP54098 1239 aaPredicted RBP3.3□□□□□ -1.88
KPNB1-208ENST00000580019 SLC12A2P55011 1212 aa3.3□□□□□ -1.88
KPNB1-208ENST00000580019 EIF3BP55884 814 aaKnown RBP3.3□□□□□ -1.88
KPNB1-208ENST00000580019 UBASH3AP57075 661 aa3.3□□□□□ -1.88
KPNB1-208ENST00000580019 EIF4A1P60842 406 aaKnown RBP3.3□□□□□ -1.88
KPNB1-208ENST00000580019 SSBP2P81877 361 aaPredicted RBP3.3□□□□□ -1.88
KPNB1-208ENST00000580019 HMGN5P82970 282 aaKnown RBP3.3□□□□□ -1.88
KPNB1-208ENST00000580019 IL1RL1Q01638 556 aa3.3□□□□□ -1.88
KPNB1-208ENST00000580019 YWHAHQ04917 246 aaPredicted RBP3.3□□□□□ -1.88
KPNB1-208ENST00000580019 GOLGA8DPQ0D2H9 430 aa3.3□□□□□ -1.88
KPNB1-208ENST00000580019 TNIP1Q15025 636 aa3.3□□□□□ -1.88
KPNB1-208ENST00000580019 TAF7Q15545 349 aaPredicted RBP3.3□□□□□ -1.88
KPNB1-208ENST00000580019 ZNF674Q2M3X9 581 aa3.3□□□□□ -1.88
KPNB1-208ENST00000580019 MTX3Q5HYI7 312 aa3.3□□□□□ -1.88
KPNB1-208ENST00000580019 C9orf152Q5JTZ5 239 aa3.3□□□□□ -1.88
KPNB1-208ENST00000580019 ERMARDQ5T6L9 678 aa3.3□□□□□ -1.88
KPNB1-208ENST00000580019 MANEALQ5VSG8 457 aa3.3□□□□□ -1.88
KPNB1-208ENST00000580019 CACHD1Q5VU97 1274 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms