RNA–Protein interactions for RNA: ENST00000578922.1

SMG8-203, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

BASIC

Gene SMG8, Length 2,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-203ENST00000578922 KLHDC10Q6PID8 442 aa20.66■□□□□ 0.9
SMG8-203ENST00000578922 ZNF534Q76KX8 674 aa20.66■□□□□ 0.9
SMG8-203ENST00000578922 ZNF354CQ86Y25 554 aa20.66■□□□□ 0.9
SMG8-203ENST00000578922 ZNF276Q8N554 614 aa20.66■□□□□ 0.9
SMG8-203ENST00000578922 MRPL43Q8N983 215 aaKnown RBP20.66■□□□□ 0.9
SMG8-203ENST00000578922 ARHGEF3Q9NR81 526 aa20.66■□□□□ 0.9
SMG8-203ENST00000578922 TLR9Q9NR96 1032 aa20.66■□□□□ 0.9
SMG8-203ENST00000578922 PPARGC1AQ9UBK2 798 aaKnown RBP20.66■□□□□ 0.9
SMG8-203ENST00000578922 IGLV3-10A0A075B6K4 115 aa20.65■□□□□ 0.9
SMG8-203ENST00000578922 F5H5T6 163 aa20.65■□□□□ 0.9
SMG8-203ENST00000578922 MAFKO60675 156 aa20.65■□□□□ 0.9
SMG8-203ENST00000578922 GLUD1P00367 558 aa20.65■□□□□ 0.9
SMG8-203ENST00000578922 GJA1P17302 382 aa20.65■□□□□ 0.9
SMG8-203ENST00000578922 TPSB2P20231 275 aa20.65■□□□□ 0.9
SMG8-203ENST00000578922 CD68P34810 354 aaPredicted RBP20.65■□□□□ 0.9
SMG8-203ENST00000578922 SLC11A2P49281 568 aa20.65■□□□□ 0.9
SMG8-203ENST00000578922 TPSAB1Q15661 275 aa20.65■□□□□ 0.9
SMG8-203ENST00000578922 TEX44Q53QW1 395 aa20.65■□□□□ 0.9
SMG8-203ENST00000578922 PALM2Q8IXS6 379 aa20.65■□□□□ 0.9
SMG8-203ENST00000578922 FITM2Q8N6M3 262 aa20.65■□□□□ 0.9
SMG8-203ENST00000578922 ARL14EPQ8N8R7 260 aaPredicted RBP20.65■□□□□ 0.9
SMG8-203ENST00000578922 DENND1AQ8TEH3 1009 aa20.65■□□□□ 0.9
SMG8-203ENST00000578922 TMEM248Q9NWD8 314 aa20.65■□□□□ 0.9
SMG8-203ENST00000578922 FETUBQ9UGM5 382 aa20.65■□□□□ 0.9
SMG8-203ENST00000578922 MAFFQ9ULX9 164 aa20.65■□□□□ 0.9
SMG8-203ENST00000578922 WASH4PA8MWX3 477 aa20.65■□□□□ 0.9
SMG8-203ENST00000578922 FOXO6A8MYZ6 492 aa20.65■□□□□ 0.9
SMG8-203ENST00000578922 GRM6O15303 877 aa20.65■□□□□ 0.9
SMG8-203ENST00000578922 CCL16O15467 120 aa20.65■□□□□ 0.9
SMG8-203ENST00000578922 ATP5HO75947 161 aa20.65■□□□□ 0.9
SMG8-203ENST00000578922 CCNB1P14635 433 aa20.65■□□□□ 0.9
SMG8-203ENST00000578922 NFKB1P19838 968 aa20.65■□□□□ 0.9
SMG8-203ENST00000578922 GCAP28676 217 aa20.65■□□□□ 0.9
SMG8-203ENST00000578922 WDR4P57081 412 aaKnown RBP20.65■□□□□ 0.9
SMG8-203ENST00000578922 AFMIDQ63HM1 303 aa20.65■□□□□ 0.9
SMG8-203ENST00000578922 CGB2Q6NT52 195 aa20.65■□□□□ 0.9
SMG8-203ENST00000578922 C3orf62Q6ZUJ4 267 aa20.65■□□□□ 0.9
SMG8-203ENST00000578922 ASRGL1Q7L266 308 aa20.65■□□□□ 0.9
SMG8-203ENST00000578922 HMCESQ96FZ2 354 aa20.65■□□□□ 0.9
SMG8-203ENST00000578922 CFAP36Q96G28 342 aa20.65■□□□□ 0.9
SMG8-203ENST00000578922 GORASP1Q9BQQ3 440 aa20.65■□□□□ 0.9
SMG8-203ENST00000578922 UBP1Q9NZI7 540 aa20.65■□□□□ 0.9
SMG8-203ENST00000578922 ANAPC1Q9H1A4 1944 aa20.64■□□□□ 0.9
SMG8-203ENST00000578922 NYNRINQ9P2P1 1898 aaKnown RBP20.64■□□□□ 0.89
SMG8-203ENST00000578922 DRGXA6NNA5 263 aa20.64■□□□□ 0.89
SMG8-203ENST00000578922 NRG2O14511 850 aaPredicted RBP20.64■□□□□ 0.89
SMG8-203ENST00000578922 MTSS1O43312 755 aa20.64■□□□□ 0.89
SMG8-203ENST00000578922 CA3P07451 260 aa20.64■□□□□ 0.89
SMG8-203ENST00000578922 CCNCP24863 283 aa20.64■□□□□ 0.89
SMG8-203ENST00000578922 FOXN2P32314 431 aa20.64■□□□□ 0.89
SMG8-203ENST00000578922 ZKSCAN8Q15776 578 aaPredicted RBP20.64■□□□□ 0.89
SMG8-203ENST00000578922 GAREM2Q75VX8 874 aa20.64■□□□□ 0.89
SMG8-203ENST00000578922 OTOP3Q7RTS5 596 aa20.64■□□□□ 0.89
SMG8-203ENST00000578922 ATP11CQ8NB49 1132 aa20.64■□□□□ 0.89
SMG8-203ENST00000578922 MCUQ8NE86 351 aa20.64■□□□□ 0.89
SMG8-203ENST00000578922 ZSCAN18Q8TBC5 510 aaPredicted RBP20.64■□□□□ 0.89
SMG8-203ENST00000578922 FBF1Q8TES7 1133 aa20.64■□□□□ 0.89
SMG8-203ENST00000578922 ZNF419Q96HQ0 510 aaPredicted RBP20.64■□□□□ 0.89
SMG8-203ENST00000578922 TRIM56Q9BRZ2 755 aaKnown RBP20.64■□□□□ 0.89
SMG8-203ENST00000578922 KLF16Q9BXK1 252 aaPredicted RBP20.64■□□□□ 0.89
SMG8-203ENST00000578922 SSU72Q9NP77 194 aaKnown RBP20.64■□□□□ 0.89
SMG8-203ENST00000578922 IGSF9Q9P2J2 1179 aa20.64■□□□□ 0.89
SMG8-203ENST00000578922 LZTS1Q9Y250 596 aa20.64■□□□□ 0.89
SMG8-203ENST00000578922 DOCK4Q8N1I0 1966 aa20.64■□□□□ 0.89
SMG8-203ENST00000578922 ARHGAP42A6NI28 874 aa20.63■□□□□ 0.89
SMG8-203ENST00000578922 OR1E1P30953 314 aa20.63■□□□□ 0.89
SMG8-203ENST00000578922 PPP3CCP48454 512 aa20.63■□□□□ 0.89
SMG8-203ENST00000578922 CCDC149Q6ZUS6 474 aa20.63■□□□□ 0.89
SMG8-203ENST00000578922 MPP5Q8N3R9 675 aa20.63■□□□□ 0.89
SMG8-203ENST00000578922 CNTD1Q8N815 330 aa20.63■□□□□ 0.89
SMG8-203ENST00000578922 PLD4Q96BZ4 506 aa20.63■□□□□ 0.89
SMG8-203ENST00000578922 SMC6Q96SB8 1091 aa20.63■□□□□ 0.89
SMG8-203ENST00000578922 CORO1BQ9BR76 489 aa20.63■□□□□ 0.89
SMG8-203ENST00000578922 TRABDQ9H4I3 376 aa20.63■□□□□ 0.89
SMG8-203ENST00000578922 IPO11Q9UI26 975 aaKnown RBP20.63■□□□□ 0.89
SMG8-203ENST00000578922 TEX264Q9Y6I9 313 aa20.63■□□□□ 0.89
SMG8-203ENST00000578922 POC1B-GALNT4F8VUJ3 575 aa20.63■□□□□ 0.89
SMG8-203ENST00000578922 TSPAN3O60637 253 aa20.63■□□□□ 0.89
SMG8-203ENST00000578922 USP12O75317 370 aa20.63■□□□□ 0.89
SMG8-203ENST00000578922 RPS24P62847 133 aaKnown RBP20.63■□□□□ 0.89
SMG8-203ENST00000578922 KCNJ2P63252 427 aa20.63■□□□□ 0.89
SMG8-203ENST00000578922 SMAD3P84022 425 aaKnown RBP20.63■□□□□ 0.89
SMG8-203ENST00000578922 EFTUD2Q15029 972 aaKnown RBP eCLIP20.63■□□□□ 0.89
SMG8-203ENST00000578922 UMODL1-AS1Q8N2C9 162 aa20.63■□□□□ 0.89
SMG8-203ENST00000578922 TEKT5Q96M29 485 aa20.63■□□□□ 0.89
SMG8-203ENST00000578922 TSGA13Q96PP4 275 aa20.63■□□□□ 0.89
SMG8-203ENST00000578922 TXLNGQ9NUQ3 528 aa20.63■□□□□ 0.89
SMG8-203ENST00000578922 AGO1Q9UL18 857 aaKnown RBP20.63■□□□□ 0.89
SMG8-203ENST00000578922 IRAK3Q9Y616 596 aa20.63■□□□□ 0.89
SMG8-203ENST00000578922 MAD1L1Q9Y6D9 718 aa20.63■□□□□ 0.89
SMG8-203ENST00000578922 ZFP37Q9Y6Q3 630 aaPredicted RBP20.63■□□□□ 0.89
SMG8-203ENST00000578922 A0A1W2PRU2 124 aa20.62■□□□□ 0.89
SMG8-203ENST00000578922 J3KR12 359 aa20.62■□□□□ 0.89
SMG8-203ENST00000578922 RFPL2O75678 378 aa20.62■□□□□ 0.89
SMG8-203ENST00000578922 MYL4P12829 197 aa20.62■□□□□ 0.89
SMG8-203ENST00000578922 HDCP19113 662 aa20.62■□□□□ 0.89
SMG8-203ENST00000578922 SESN2P58004 480 aaPredicted RBP20.62■□□□□ 0.89
SMG8-203ENST00000578922 CRADDP78560 199 aa20.62■□□□□ 0.89
SMG8-203ENST00000578922 STXBP5Q5T5C0 1151 aa20.62■□□□□ 0.89
SMG8-203ENST00000578922 MAB21L3Q8N8X9 362 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms