RNA–Protein interactions for RNA: ENST00000578904.1

CSNK1D-209, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-209ENST00000578904 TRIM51Q9BSJ1 452 aa14.23□□□□□ -0.13
CSNK1D-209ENST00000578904 FOXP3Q9BZS1 431 aa14.23□□□□□ -0.13
CSNK1D-209ENST00000578904 TRIM31Q9BZY9 425 aa14.23□□□□□ -0.13
CSNK1D-209ENST00000578904 USP29Q9HBJ7 922 aa14.23□□□□□ -0.13
CSNK1D-209ENST00000578904 HEBP1Q9NRV9 189 aa14.23□□□□□ -0.13
CSNK1D-209ENST00000578904 PLK2Q9NYY3 685 aa14.23□□□□□ -0.13
CSNK1D-209ENST00000578904 MARK1Q9P0L2 795 aa14.23□□□□□ -0.13
CSNK1D-209ENST00000578904 KIAA1522Q9P206 1035 aaPredicted RBP14.23□□□□□ -0.13
CSNK1D-209ENST00000578904 IPO11Q9UI26 975 aaKnown RBP14.23□□□□□ -0.13
CSNK1D-209ENST00000578904 FBXL21Q9UKT6 434 aa14.23□□□□□ -0.13
CSNK1D-209ENST00000578904 TBC1D30Q9Y2I9 924 aa14.23□□□□□ -0.13
CSNK1D-209ENST00000578904 MFHAS1Q9Y4C4 1052 aa14.23□□□□□ -0.13
CSNK1D-209ENST00000578904 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP14.22□□□□□ -0.13
CSNK1D-209ENST00000578904 A0A0A0MRY4 1105 aa14.22□□□□□ -0.13
CSNK1D-209ENST00000578904 OTOL1A6NHN0 477 aaPredicted RBP14.22□□□□□ -0.13
CSNK1D-209ENST00000578904 GFRA2O00451 464 aa14.22□□□□□ -0.13
CSNK1D-209ENST00000578904 MATN3O15232 486 aa14.22□□□□□ -0.13
CSNK1D-209ENST00000578904 PSMD3O43242 534 aa14.22□□□□□ -0.13
CSNK1D-209ENST00000578904 MAP3K6O95382 1288 aa14.22□□□□□ -0.13
CSNK1D-209ENST00000578904 PENKP01210 267 aaPredicted RBP14.22□□□□□ -0.13
CSNK1D-209ENST00000578904 TYRP14679 529 aa14.22□□□□□ -0.13
CSNK1D-209ENST00000578904 SOX9P48436 509 aa14.22□□□□□ -0.13
CSNK1D-209ENST00000578904 PAPOLAP51003 745 aaKnown RBP14.22□□□□□ -0.13
CSNK1D-209ENST00000578904 GEMIN4P57678 1058 aaKnown RBP14.22□□□□□ -0.13
CSNK1D-209ENST00000578904 SARNPP82979 210 aaKnown RBP14.22□□□□□ -0.13
CSNK1D-209ENST00000578904 IL10RBQ08334 325 aa14.22□□□□□ -0.13
CSNK1D-209ENST00000578904 PRPSAP1Q14558 356 aa14.22□□□□□ -0.13
CSNK1D-209ENST00000578904 FYB2Q5VWT5 728 aa14.22□□□□□ -0.13
CSNK1D-209ENST00000578904 IL31Q6EBC2 164 aa14.22□□□□□ -0.13
CSNK1D-209ENST00000578904 PPP1R21Q6ZMI0 780 aa14.22□□□□□ -0.13
CSNK1D-209ENST00000578904 CCNI2Q6ZMN8 369 aaPredicted RBP14.22□□□□□ -0.13
CSNK1D-209ENST00000578904 METTL3Q86U44 580 aaKnown RBP14.22□□□□□ -0.13
CSNK1D-209ENST00000578904 CIR1Q86X95 450 aaPredicted RBP14.22□□□□□ -0.13
CSNK1D-209ENST00000578904 MFN1Q8IWA4 741 aa14.22□□□□□ -0.13
CSNK1D-209ENST00000578904 ARHGAP12Q8IWW6 846 aa14.22□□□□□ -0.13
CSNK1D-209ENST00000578904 SPATA13Q96N96 652 aa14.22□□□□□ -0.13
CSNK1D-209ENST00000578904 ZNF599Q96NL3 588 aa14.22□□□□□ -0.13
CSNK1D-209ENST00000578904 SLC2A11Q9BYW1 496 aa14.22□□□□□ -0.13
CSNK1D-209ENST00000578904 MUC3BQ9H195 1237 aa14.22□□□□□ -0.13
CSNK1D-209ENST00000578904 DPH5Q9H2P9 285 aa14.22□□□□□ -0.13
CSNK1D-209ENST00000578904 C8orf33Q9H7E9 229 aaPredicted RBP14.22□□□□□ -0.13
CSNK1D-209ENST00000578904 SEPT10Q9P0V9 454 aa14.22□□□□□ -0.13
CSNK1D-209ENST00000578904 KLHL8Q9P2G9 620 aaPredicted RBP14.22□□□□□ -0.13
CSNK1D-209ENST00000578904 ANAPC5Q9UJX4 755 aa14.22□□□□□ -0.13
CSNK1D-209ENST00000578904 TPX2Q9ULW0 747 aaKnown RBP14.22□□□□□ -0.13
CSNK1D-209ENST00000578904 CA14Q9ULX7 337 aa14.22□□□□□ -0.13
CSNK1D-209ENST00000578904 SNX24Q9Y343 169 aa14.22□□□□□ -0.13
CSNK1D-209ENST00000578904 PIAS3Q9Y6X2 628 aa14.22□□□□□ -0.13
CSNK1D-209ENST00000578904 E7EVH7 732 aa14.21□□□□□ -0.13
CSNK1D-209ENST00000578904 RNF103O00237 685 aa14.21□□□□□ -0.13
CSNK1D-209ENST00000578904 DNALI1O14645 258 aaPredicted RBP14.21□□□□□ -0.13
CSNK1D-209ENST00000578904 CCNB1P14635 433 aa14.21□□□□□ -0.13
CSNK1D-209ENST00000578904 HOXD9P28356 352 aaPredicted RBP14.21□□□□□ -0.13
CSNK1D-209ENST00000578904 GJA4P35212 333 aa14.21□□□□□ -0.13
CSNK1D-209ENST00000578904 VPS41P49754 854 aa14.21□□□□□ -0.13
CSNK1D-209ENST00000578904 MRPS25P82663 173 aaKnown RBP14.21□□□□□ -0.13
CSNK1D-209ENST00000578904 SERINC3Q13530 473 aa14.21□□□□□ -0.13
CSNK1D-209ENST00000578904 HNRNPDQ14103 355 aaKnown RBP14.21□□□□□ -0.13
CSNK1D-209ENST00000578904 RFTN1Q14699 578 aaPredicted RBP14.21□□□□□ -0.13
CSNK1D-209ENST00000578904 MORF4L2Q15014 288 aa14.21□□□□□ -0.13
CSNK1D-209ENST00000578904 TRIP13Q15645 432 aaPredicted RBP14.21□□□□□ -0.13
CSNK1D-209ENST00000578904 MLF2Q15773 248 aaPredicted RBP14.21□□□□□ -0.13
CSNK1D-209ENST00000578904 SLC44A4Q53GD3 710 aa14.21□□□□□ -0.13
CSNK1D-209ENST00000578904 TEX44Q53QW1 395 aa14.21□□□□□ -0.13
CSNK1D-209ENST00000578904 TPRG1Q6ZUI0 275 aa14.21□□□□□ -0.13
CSNK1D-209ENST00000578904 PID1Q7Z2X4 250 aa14.21□□□□□ -0.13
CSNK1D-209ENST00000578904 FIBINQ8TAL6 211 aa14.21□□□□□ -0.13
CSNK1D-209ENST00000578904 ARHGEF2Q92974 986 aaKnown RBP14.21□□□□□ -0.13
CSNK1D-209ENST00000578904 MSANTD3Q96H12 275 aa14.21□□□□□ -0.13
CSNK1D-209ENST00000578904 XPO6Q96QU8 1125 aaKnown RBP14.21□□□□□ -0.13
CSNK1D-209ENST00000578904 FRMD8Q9BZ67 464 aaPredicted RBP14.21□□□□□ -0.13
CSNK1D-209ENST00000578904 ATP13A1Q9HD20 1204 aa14.21□□□□□ -0.13
CSNK1D-209ENST00000578904 ARHGEF3Q9NR81 526 aa14.21□□□□□ -0.13
CSNK1D-209ENST00000578904 DNAJC17Q9NVM6 304 aaKnown RBP14.21□□□□□ -0.13
CSNK1D-209ENST00000578904 ZNF212Q9UDV6 495 aa14.21□□□□□ -0.13
CSNK1D-209ENST00000578904 NEU2Q9Y3R4 380 aa14.21□□□□□ -0.13
CSNK1D-209ENST00000578904 CXorf51AA0A1B0GTR3 108 aa14.2□□□□□ -0.14
CSNK1D-209ENST00000578904 SPECC1L-ADORA2AF8WAN1 911 aa14.2□□□□□ -0.14
CSNK1D-209ENST00000578904 DCXO43602 365 aa14.2□□□□□ -0.14
CSNK1D-209ENST00000578904 KDELR3O43731 214 aa14.2□□□□□ -0.14
CSNK1D-209ENST00000578904 CACNG3O60359 315 aa14.2□□□□□ -0.14
CSNK1D-209ENST00000578904 MAFKO60675 156 aa14.2□□□□□ -0.14
CSNK1D-209ENST00000578904 SEC31AO94979 1220 aaKnown RBP14.2□□□□□ -0.14
CSNK1D-209ENST00000578904 GLULP15104 373 aa14.2□□□□□ -0.14
CSNK1D-209ENST00000578904 CTHP32929 405 aa14.2□□□□□ -0.14
CSNK1D-209ENST00000578904 RPL22P35268 128 aaKnown RBP14.2□□□□□ -0.14
CSNK1D-209ENST00000578904 RPL21P46778 160 aaKnown RBP14.2□□□□□ -0.14
CSNK1D-209ENST00000578904 LMAN1P49257 510 aa14.2□□□□□ -0.14
CSNK1D-209ENST00000578904 IRAK1P51617 712 aa14.2□□□□□ -0.14
CSNK1D-209ENST00000578904 CLCN6P51797 869 aa14.2□□□□□ -0.14
CSNK1D-209ENST00000578904 VSNL1P62760 191 aa14.2□□□□□ -0.14
CSNK1D-209ENST00000578904 IFI35P80217 286 aaPredicted RBP14.2□□□□□ -0.14
CSNK1D-209ENST00000578904 BASP1P80723 227 aaKnown RBP14.2□□□□□ -0.14
CSNK1D-209ENST00000578904 ZXDAP98168 799 aa14.2□□□□□ -0.14
CSNK1D-209ENST00000578904 CDK16Q00536 496 aa14.2□□□□□ -0.14
CSNK1D-209ENST00000578904 DMC1Q14565 340 aa14.2□□□□□ -0.14
CSNK1D-209ENST00000578904 NAA30Q147X3 362 aaPredicted RBP14.2□□□□□ -0.14
CSNK1D-209ENST00000578904 PARP6Q2NL67 630 aa14.2□□□□□ -0.14
CSNK1D-209ENST00000578904 GAB4Q2WGN9 574 aa14.2□□□□□ -0.14
CSNK1D-209ENST00000578904 PREPLQ4J6C6 727 aaPredicted RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms