RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 ATP5OP48047 213 aa11.51□□□□□ -0.57
CDK5RAP3-210ENST00000578733 RENBPP51606 427 aa11.51□□□□□ -0.57
CDK5RAP3-210ENST00000578733 OTUD4Q01804 1114 aaKnown RBP11.51□□□□□ -0.57
CDK5RAP3-210ENST00000578733 GBE1Q04446 702 aa11.51□□□□□ -0.57
CDK5RAP3-210ENST00000578733 CKAP4Q07065 602 aaKnown RBP11.51□□□□□ -0.57
CDK5RAP3-210ENST00000578733 AP1B1Q10567 949 aa11.51□□□□□ -0.57
CDK5RAP3-210ENST00000578733 NOMO1Q15155 1222 aa11.51□□□□□ -0.57
CDK5RAP3-210ENST00000578733 FNDC3BQ53EP0 1204 aaKnown RBP11.51□□□□□ -0.57
CDK5RAP3-210ENST00000578733 INO80DQ53TQ3 878 aaPredicted RBP11.51□□□□□ -0.57
CDK5RAP3-210ENST00000578733 ASTLQ6HA08 431 aaPredicted RBP11.51□□□□□ -0.57
CDK5RAP3-210ENST00000578733 FSTL4Q6MZW2 842 aa11.51□□□□□ -0.57
CDK5RAP3-210ENST00000578733 AADACL2Q6P093 401 aa11.51□□□□□ -0.57
CDK5RAP3-210ENST00000578733 TXNDC11Q6PKC3 985 aa11.51□□□□□ -0.57
CDK5RAP3-210ENST00000578733 ADIPOR2Q86V24 386 aa11.51□□□□□ -0.57
CDK5RAP3-210ENST00000578733 ARHGAP12Q8IWW6 846 aa11.51□□□□□ -0.57
CDK5RAP3-210ENST00000578733 CCDC13Q8IYE1 715 aa11.51□□□□□ -0.57
CDK5RAP3-210ENST00000578733 APCDD1Q8J025 514 aa11.51□□□□□ -0.57
CDK5RAP3-210ENST00000578733 PHTF2Q8N3S3 785 aa11.51□□□□□ -0.57
CDK5RAP3-210ENST00000578733 NPWQ8N729 165 aa11.51□□□□□ -0.57
CDK5RAP3-210ENST00000578733 ZNF513Q8N8E2 541 aaPredicted RBP11.51□□□□□ -0.57
CDK5RAP3-210ENST00000578733 TFB1MQ8WVM0 346 aaKnown RBP11.51□□□□□ -0.57
CDK5RAP3-210ENST00000578733 LMLNQ96KR4 655 aa11.51□□□□□ -0.57
CDK5RAP3-210ENST00000578733 IER2Q9BTL4 223 aa11.51□□□□□ -0.57
CDK5RAP3-210ENST00000578733 KLC2Q9H0B6 622 aa11.51□□□□□ -0.57
CDK5RAP3-210ENST00000578733 TBC1D17Q9HA65 648 aa11.51□□□□□ -0.57
CDK5RAP3-210ENST00000578733 UBA2Q9UBT2 640 aaPredicted RBP11.51□□□□□ -0.57
CDK5RAP3-210ENST00000578733 SUN2Q9UH99 717 aa11.51□□□□□ -0.57
CDK5RAP3-210ENST00000578733 VPS51Q9UID3 782 aa11.51□□□□□ -0.57
CDK5RAP3-210ENST00000578733 OR51B4Q9Y5P0 310 aa11.51□□□□□ -0.57
CDK5RAP3-210ENST00000578733 CFAP69A5D8W1 941 aa11.5□□□□□ -0.57
CDK5RAP3-210ENST00000578733 KRBA1A5PL33 1030 aa11.5□□□□□ -0.57
CDK5RAP3-210ENST00000578733 PRRT4C9JH25 899 aa11.5□□□□□ -0.57
CDK5RAP3-210ENST00000578733 TRIM24O15164 1050 aa11.5□□□□□ -0.57
CDK5RAP3-210ENST00000578733 PRAMEF11O60813 436 aa11.5□□□□□ -0.57
CDK5RAP3-210ENST00000578733 URI1O94763 535 aaPredicted RBP11.5□□□□□ -0.57
CDK5RAP3-210ENST00000578733 EGFP01133 1207 aa11.5□□□□□ -0.57
CDK5RAP3-210ENST00000578733 HNRNPLP14866 589 aaKnown RBP eCLIP11.5□□□□□ -0.57
CDK5RAP3-210ENST00000578733 HSPA9P38646 679 aaKnown RBP11.5□□□□□ -0.57
CDK5RAP3-210ENST00000578733 RECQLP46063 649 aaPredicted RBP11.5□□□□□ -0.57
CDK5RAP3-210ENST00000578733 SERPINH1P50454 418 aaKnown RBP11.5□□□□□ -0.57
CDK5RAP3-210ENST00000578733 VASPP50552 380 aaPredicted RBP11.5□□□□□ -0.57
CDK5RAP3-210ENST00000578733 EIF3EP60228 445 aaKnown RBP11.5□□□□□ -0.57
CDK5RAP3-210ENST00000578733 PPIDQ08752 370 aaKnown RBP11.5□□□□□ -0.57
CDK5RAP3-210ENST00000578733 KLF1Q13351 362 aaPredicted RBP11.5□□□□□ -0.57
CDK5RAP3-210ENST00000578733 ZNF235Q14590 738 aa11.5□□□□□ -0.57
CDK5RAP3-210ENST00000578733 STARD3Q14849 445 aa11.5□□□□□ -0.57
CDK5RAP3-210ENST00000578733 EOGTQ5NDL2 527 aa11.5□□□□□ -0.57
CDK5RAP3-210ENST00000578733 HEATR6Q6AI08 1181 aaKnown RBP11.5□□□□□ -0.57
CDK5RAP3-210ENST00000578733 DARS2Q6PI48 645 aaKnown RBP11.5□□□□□ -0.57
CDK5RAP3-210ENST00000578733 CHPFQ8IZ52 775 aa11.5□□□□□ -0.57
CDK5RAP3-210ENST00000578733 ATP11CQ8NB49 1132 aa11.5□□□□□ -0.57
CDK5RAP3-210ENST00000578733 FLCNQ8NFG4 579 aa11.5□□□□□ -0.57
CDK5RAP3-210ENST00000578733 OR52K2Q8NGK3 314 aa11.5□□□□□ -0.57
CDK5RAP3-210ENST00000578733 ACTL9Q8TC94 416 aa11.5□□□□□ -0.57
CDK5RAP3-210ENST00000578733 FATE1Q969F0 183 aa11.5□□□□□ -0.57
CDK5RAP3-210ENST00000578733 ALG14Q96F25 216 aa11.5□□□□□ -0.57
CDK5RAP3-210ENST00000578733 P2RY11Q96G91 374 aa11.5□□□□□ -0.57
CDK5RAP3-210ENST00000578733 CAPZA3Q96KX2 299 aa11.5□□□□□ -0.57
CDK5RAP3-210ENST00000578733 OLFM3Q96PB7 478 aa11.5□□□□□ -0.57
CDK5RAP3-210ENST00000578733 TSGA13Q96PP4 275 aa11.5□□□□□ -0.57
CDK5RAP3-210ENST00000578733 CINPQ9BW66 212 aaPredicted RBP11.5□□□□□ -0.57
CDK5RAP3-210ENST00000578733 CEP44Q9C0F1 390 aa11.5□□□□□ -0.57
CDK5RAP3-210ENST00000578733 NOL6Q9H6R4 1146 aaKnown RBP11.5□□□□□ -0.57
CDK5RAP3-210ENST00000578733 THAP10Q9P2Z0 257 aaPredicted RBP11.5□□□□□ -0.57
CDK5RAP3-210ENST00000578733 AMACRQ9UHK6 382 aa11.5□□□□□ -0.57
CDK5RAP3-210ENST00000578733 INTS6Q9UL03 887 aaKnown RBP11.5□□□□□ -0.57
CDK5RAP3-210ENST00000578733 ERVW-1Q9UQF0 538 aa11.5□□□□□ -0.57
CDK5RAP3-210ENST00000578733 HS3ST2Q9Y278 367 aa11.5□□□□□ -0.57
CDK5RAP3-210ENST00000578733 MFHAS1Q9Y4C4 1052 aa11.5□□□□□ -0.57
CDK5RAP3-210ENST00000578733 FARP1Q9Y4F1 1045 aaPredicted RBP11.5□□□□□ -0.57
CDK5RAP3-210ENST00000578733 FAM170BA6NMN3 283 aa11.49□□□□□ -0.57
CDK5RAP3-210ENST00000578733 K7EQS6 105 aa11.49□□□□□ -0.57
CDK5RAP3-210ENST00000578733 KRIT1O00522 736 aa11.49□□□□□ -0.57
CDK5RAP3-210ENST00000578733 MATN3O15232 486 aa11.49□□□□□ -0.57
CDK5RAP3-210ENST00000578733 ZBTB24O43167 697 aaPredicted RBP11.49□□□□□ -0.57
CDK5RAP3-210ENST00000578733 RNF40O75150 1001 aa11.49□□□□□ -0.57
CDK5RAP3-210ENST00000578733 RBP3P10745 1247 aa11.49□□□□□ -0.57
CDK5RAP3-210ENST00000578733 PECAM1P16284 738 aaPredicted RBP11.49□□□□□ -0.57
CDK5RAP3-210ENST00000578733 CD72P21854 359 aa11.49□□□□□ -0.57
CDK5RAP3-210ENST00000578733 TIE1P35590 1138 aa11.49□□□□□ -0.57
CDK5RAP3-210ENST00000578733 ACTN2P35609 894 aa11.49□□□□□ -0.57
CDK5RAP3-210ENST00000578733 SEC13P55735 322 aa11.49□□□□□ -0.57
CDK5RAP3-210ENST00000578733 LMNB2Q03252 620 aa11.49□□□□□ -0.57
CDK5RAP3-210ENST00000578733 BYSLQ13895 437 aaKnown RBP11.49□□□□□ -0.57
CDK5RAP3-210ENST00000578733 CCINQ13939 588 aa11.49□□□□□ -0.57
CDK5RAP3-210ENST00000578733 HNRNPDQ14103 355 aaKnown RBP11.49□□□□□ -0.57
CDK5RAP3-210ENST00000578733 LBRQ14739 615 aaKnown RBP11.49□□□□□ -0.57
CDK5RAP3-210ENST00000578733 CCNG2Q16589 344 aa11.49□□□□□ -0.57
CDK5RAP3-210ENST00000578733 ACCSLQ4AC99 568 aa11.49□□□□□ -0.57
CDK5RAP3-210ENST00000578733 SLC45A4Q5BKX6 768 aa11.49□□□□□ -0.57
CDK5RAP3-210ENST00000578733 MARC1Q5VT66 337 aa11.49□□□□□ -0.57
CDK5RAP3-210ENST00000578733 NAIF1Q69YI7 327 aaPredicted RBP11.49□□□□□ -0.57
CDK5RAP3-210ENST00000578733 NPNTQ6UXI9 565 aa11.49□□□□□ -0.57
CDK5RAP3-210ENST00000578733 SERPINA13PQ6UXR4 307 aa11.49□□□□□ -0.57
CDK5RAP3-210ENST00000578733 ADAT2Q7Z6V5 191 aaKnown RBP11.49□□□□□ -0.57
CDK5RAP3-210ENST00000578733 ZC3H18Q86VM9 953 aaKnown RBP11.49□□□□□ -0.57
CDK5RAP3-210ENST00000578733 SH2D3CQ8N5H7 860 aa11.49□□□□□ -0.57
CDK5RAP3-210ENST00000578733 PJA1Q8NG27 643 aa11.49□□□□□ -0.57
CDK5RAP3-210ENST00000578733 COG1Q8WTW3 980 aa11.49□□□□□ -0.57
CDK5RAP3-210ENST00000578733 ATOH1Q92858 354 aaPredicted RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms