RNA–Protein interactions for RNA: ENST00000578430.1

SRSF1-202, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2

Gene SRSF1, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-202ENST00000578430 PID1Q7Z2X4 250 aa13.7□□□□□ -0.22
SRSF1-202ENST00000578430 PPIL6Q8IXY8 311 aa13.7□□□□□ -0.22
SRSF1-202ENST00000578430 YAF2Q8IY57 180 aa13.7□□□□□ -0.22
SRSF1-202ENST00000578430 ZNF567Q8N184 647 aa13.7□□□□□ -0.22
SRSF1-202ENST00000578430 BBS5Q8N3I7 341 aa13.7□□□□□ -0.22
SRSF1-202ENST00000578430 CCDC33Q8N5R6 958 aa13.7□□□□□ -0.22
SRSF1-202ENST00000578430 TEX26Q8N6G2 289 aa13.7□□□□□ -0.22
SRSF1-202ENST00000578430 DCAF4L2Q8NA75 395 aa13.7□□□□□ -0.22
SRSF1-202ENST00000578430 NETO2Q8NC67 525 aa13.7□□□□□ -0.22
SRSF1-202ENST00000578430 CCDC110Q8TBZ0 833 aa13.7□□□□□ -0.22
SRSF1-202ENST00000578430 HNRNPLLQ8WVV9 542 aaKnown RBP13.7□□□□□ -0.22
SRSF1-202ENST00000578430 ART4Q93070 314 aa13.7□□□□□ -0.22
SRSF1-202ENST00000578430 TEKT5Q96M29 485 aa13.7□□□□□ -0.22
SRSF1-202ENST00000578430 LRRC3BQ96PB8 259 aa13.7□□□□□ -0.22
SRSF1-202ENST00000578430 FAM83CQ9BQN1 747 aa13.7□□□□□ -0.22
SRSF1-202ENST00000578430 C2orf49Q9BVC5 232 aaPredicted RBP13.7□□□□□ -0.22
SRSF1-202ENST00000578430 FRMD8Q9BZ67 464 aaPredicted RBP13.7□□□□□ -0.22
SRSF1-202ENST00000578430 UBE2ZQ9H832 354 aaPredicted RBP13.7□□□□□ -0.22
SRSF1-202ENST00000578430 ATP13A1Q9HD20 1204 aa13.7□□□□□ -0.22
SRSF1-202ENST00000578430 SEPT10Q9P0V9 454 aa13.7□□□□□ -0.22
SRSF1-202ENST00000578430 KLHL8Q9P2G9 620 aaPredicted RBP13.7□□□□□ -0.22
SRSF1-202ENST00000578430 MTRF1LQ9UGC7 380 aaKnown RBP13.7□□□□□ -0.22
SRSF1-202ENST00000578430 ANAPC5Q9UJX4 755 aa13.7□□□□□ -0.22
SRSF1-202ENST00000578430 SHOC2Q9UQ13 582 aa13.7□□□□□ -0.22
SRSF1-202ENST00000578430 OR51B4Q9Y5P0 310 aa13.7□□□□□ -0.22
SRSF1-202ENST00000578430 DOCK8Q8NF50 2099 aa13.69□□□□□ -0.22
SRSF1-202ENST00000578430 A0A0D9SEW6 157 aa13.69□□□□□ -0.22
SRSF1-202ENST00000578430 CHADO15335 359 aa13.69□□□□□ -0.22
SRSF1-202ENST00000578430 NEBLO76041 1014 aa13.69□□□□□ -0.22
SRSF1-202ENST00000578430 PEX11BO96011 259 aa13.69□□□□□ -0.22
SRSF1-202ENST00000578430 JCHAINP01591 159 aa13.69□□□□□ -0.22
SRSF1-202ENST00000578430 TYRP14679 529 aa13.69□□□□□ -0.22
SRSF1-202ENST00000578430 PSMC3P17980 439 aa13.69□□□□□ -0.22
SRSF1-202ENST00000578430 VPS41P49754 854 aa13.69□□□□□ -0.22
SRSF1-202ENST00000578430 CDK16Q00536 496 aa13.69□□□□□ -0.22
SRSF1-202ENST00000578430 MARC1Q5VT66 337 aa13.69□□□□□ -0.22
SRSF1-202ENST00000578430 HIBCHQ6NVY1 386 aaPredicted RBP13.69□□□□□ -0.22
SRSF1-202ENST00000578430 EMBQ6PCB8 327 aa13.69□□□□□ -0.22
SRSF1-202ENST00000578430 RHBDF2Q6PJF5 856 aa13.69□□□□□ -0.22
SRSF1-202ENST00000578430 VITQ6UXI7 678 aa13.69□□□□□ -0.22
SRSF1-202ENST00000578430 ARHGAP36Q6ZRI8 547 aa13.69□□□□□ -0.22
SRSF1-202ENST00000578430 METTL3Q86U44 580 aaKnown RBP13.69□□□□□ -0.22
SRSF1-202ENST00000578430 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.69□□□□□ -0.222e-7■■□□□ 13.8
SRSF1-202ENST00000578430 OR7D4Q8NG98 312 aa13.69□□□□□ -0.22
SRSF1-202ENST00000578430 EXOC4Q96A65 974 aa13.69□□□□□ -0.22
SRSF1-202ENST00000578430 ACDQ96AP0 544 aa13.69□□□□□ -0.22
SRSF1-202ENST00000578430 ALG14Q96F25 216 aa13.69□□□□□ -0.22
SRSF1-202ENST00000578430 XPO6Q96QU8 1125 aaKnown RBP13.69□□□□□ -0.22
SRSF1-202ENST00000578430 FEM1AQ9BSK4 669 aa13.69□□□□□ -0.22
SRSF1-202ENST00000578430 SPON2Q9BUD6 331 aa13.69□□□□□ -0.22
SRSF1-202ENST00000578430 PDFQ9HBH1 243 aa13.69□□□□□ -0.22
SRSF1-202ENST00000578430 RAB6BQ9NRW1 208 aa13.69□□□□□ -0.22
SRSF1-202ENST00000578430 ZDHHC18Q9NUE0 388 aa13.69□□□□□ -0.22
SRSF1-202ENST00000578430 NYNRINQ9P2P1 1898 aaKnown RBP13.68□□□□□ -0.22
SRSF1-202ENST00000578430 KIF26AQ9ULI4 1882 aaPredicted RBP13.68□□□□□ -0.22
SRSF1-202ENST00000578430 GOLGA6CA6NDK9 693 aa13.68□□□□□ -0.22
SRSF1-202ENST00000578430 GOLGA6BA6NDN3 693 aa13.68□□□□□ -0.22
SRSF1-202ENST00000578430 ERI2A8K979 691 aaKnown RBP13.68□□□□□ -0.22
SRSF1-202ENST00000578430 NEDD8-MDP1E9PL57 170 aa13.68□□□□□ -0.22
SRSF1-202ENST00000578430 J3KR12 359 aa13.68□□□□□ -0.22
SRSF1-202ENST00000578430 PSMD3O43242 534 aa13.68□□□□□ -0.22
SRSF1-202ENST00000578430 CACNG3O60359 315 aa13.68□□□□□ -0.22
SRSF1-202ENST00000578430 CYP17A1P05093 508 aa13.68□□□□□ -0.22
SRSF1-202ENST00000578430 GOLGA6DP0CG33 693 aa13.68□□□□□ -0.22
SRSF1-202ENST00000578430 ADH5P11766 374 aa13.68□□□□□ -0.22
SRSF1-202ENST00000578430 H2AFXP16104 143 aaPredicted RBP13.68□□□□□ -0.22
SRSF1-202ENST00000578430 HSPA9P38646 679 aaKnown RBP13.68□□□□□ -0.22
SRSF1-202ENST00000578430 CSKP41240 450 aa13.68□□□□□ -0.22
SRSF1-202ENST00000578430 ITGA8P53708 1063 aa13.68□□□□□ -0.22
SRSF1-202ENST00000578430 PLTPP55058 493 aa13.68□□□□□ -0.22
SRSF1-202ENST00000578430 SLC20A2Q08357 652 aa13.68□□□□□ -0.22
SRSF1-202ENST00000578430 LMAN2Q12907 356 aa13.68□□□□□ -0.22
SRSF1-202ENST00000578430 ZBTB17Q13105 803 aa13.68□□□□□ -0.22
SRSF1-202ENST00000578430 SEMA5AQ13591 1074 aa13.68□□□□□ -0.22
SRSF1-202ENST00000578430 PRPSAP1Q14558 356 aa13.68□□□□□ -0.22
SRSF1-202ENST00000578430 LBRQ14739 615 aaKnown RBP13.68□□□□□ -0.22
SRSF1-202ENST00000578430 INO80DQ53TQ3 878 aaPredicted RBP13.68□□□□□ -0.22
SRSF1-202ENST00000578430 FSCBQ5H9T9 825 aa13.68□□□□□ -0.22
SRSF1-202ENST00000578430 RNASEH2BQ5TBB1 312 aaKnown RBP13.68□□□□□ -0.22
SRSF1-202ENST00000578430 RETSATQ6NUM9 610 aa13.68□□□□□ -0.22
SRSF1-202ENST00000578430 ZDHHC24Q6UX98 284 aa13.68□□□□□ -0.22
SRSF1-202ENST00000578430 PPP1R21Q6ZMI0 780 aa13.68□□□□□ -0.22
SRSF1-202ENST00000578430 PRUNE1Q86TP1 453 aa13.68□□□□□ -0.22
SRSF1-202ENST00000578430 PLCD3Q8N3E9 789 aa13.68□□□□□ -0.22
SRSF1-202ENST00000578430 CPA6Q8N4T0 437 aa13.68□□□□□ -0.22
SRSF1-202ENST00000578430 OR52K2Q8NGK3 314 aa13.68□□□□□ -0.22
SRSF1-202ENST00000578430 LRRN4Q8WUT4 740 aa13.68□□□□□ -0.22
SRSF1-202ENST00000578430 NXPE3Q969Y0 559 aa13.68□□□□□ -0.22
SRSF1-202ENST00000578430 LMLNQ96KR4 655 aa13.68□□□□□ -0.22
SRSF1-202ENST00000578430 FMO2Q99518 471 aa13.68□□□□□ -0.22
SRSF1-202ENST00000578430 HINFPQ9BQA5 517 aa13.68□□□□□ -0.22
SRSF1-202ENST00000578430 PHACTR1Q9C0D0 580 aa13.68□□□□□ -0.22
SRSF1-202ENST00000578430 GBA3Q9H227 469 aa13.68□□□□□ -0.22
SRSF1-202ENST00000578430 EIF2B3Q9NR50 452 aaKnown RBP13.68□□□□□ -0.22
SRSF1-202ENST00000578430 RBM22Q9NW64 420 aaKnown RBP eCLIP13.68□□□□□ -0.22
SRSF1-202ENST00000578430 GOLGA6AQ9NYA3 693 aa13.68□□□□□ -0.22
SRSF1-202ENST00000578430 PLK2Q9NYY3 685 aa13.68□□□□□ -0.22
SRSF1-202ENST00000578430 UBA2Q9UBT2 640 aaPredicted RBP13.68□□□□□ -0.22
SRSF1-202ENST00000578430 SEPT3Q9UH03 358 aa13.68□□□□□ -0.22
SRSF1-202ENST00000578430 VPS28Q9UK41 221 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms