RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 SULF1Q8IWU6 871 aa17.77■□□□□ 0.43
SCARF1-205ENST00000571272 BEST2Q8NFU1 509 aa17.77■□□□□ 0.43
SCARF1-205ENST00000571272 ZFP28Q8NHY6 868 aa17.77■□□□□ 0.43
SCARF1-205ENST00000571272 FAM81AQ8TBF8 368 aa17.77■□□□□ 0.43
SCARF1-205ENST00000571272 KCTD4Q8WVF5 259 aa17.77■□□□□ 0.43
SCARF1-205ENST00000571272 EPB41L1Q9H4G0 881 aa17.77■□□□□ 0.43
SCARF1-205ENST00000571272 RUVBL2Q9Y230 463 aaKnown RBP17.77■□□□□ 0.43
SCARF1-205ENST00000571272 TIMM44O43615 452 aa17.76■□□□□ 0.43
SCARF1-205ENST00000571272 BEST1O76090 585 aa17.76■□□□□ 0.43
SCARF1-205ENST00000571272 ME2P23368 584 aa17.76■□□□□ 0.43
SCARF1-205ENST00000571272 ACADSBP45954 432 aa17.76■□□□□ 0.43
SCARF1-205ENST00000571272 USP10Q14694 798 aaKnown RBP17.76■□□□□ 0.43
SCARF1-205ENST00000571272 MYLK3Q32MK0 819 aa17.76■□□□□ 0.43
SCARF1-205ENST00000571272 PABPC1LQ4VXU2 614 aaKnown RBP17.76■□□□□ 0.43
SCARF1-205ENST00000571272 HFE2Q6ZVN8 426 aa17.76■□□□□ 0.43
SCARF1-205ENST00000571272 TMEM151AQ8N4L1 468 aa17.76■□□□□ 0.43
SCARF1-205ENST00000571272 RNF169Q8NCN4 708 aa17.76■□□□□ 0.43
SCARF1-205ENST00000571272 CAMKK2Q96RR4 588 aa17.76■□□□□ 0.43
SCARF1-205ENST00000571272 SNX25Q9H3E2 840 aa17.76■□□□□ 0.43
SCARF1-205ENST00000571272 SETD4Q9NVD3 440 aa17.76■□□□□ 0.43
SCARF1-205ENST00000571272 KLK14Q9P0G3 267 aa17.76■□□□□ 0.43
SCARF1-205ENST00000571272 CDYLQ9Y232 598 aa17.76■□□□□ 0.43
SCARF1-205ENST00000571272 A0A1B0GTW7 788 aa17.76■□□□□ 0.43
SCARF1-205ENST00000571272 CD68P34810 354 aaPredicted RBP17.76■□□□□ 0.43
SCARF1-205ENST00000571272 ARHGAP1Q07960 439 aa17.76■□□□□ 0.43
SCARF1-205ENST00000571272 DPYSQ14117 519 aa17.76■□□□□ 0.43
SCARF1-205ENST00000571272 PAFAH1B3Q15102 231 aaKnown RBP17.76■□□□□ 0.43
SCARF1-205ENST00000571272 PGAM4Q8N0Y7 254 aa17.76■□□□□ 0.43
SCARF1-205ENST00000571272 CCNYL1Q8N7R7 359 aa17.76■□□□□ 0.43
SCARF1-205ENST00000571272 OTUD5Q96G74 571 aa17.76■□□□□ 0.43
SCARF1-205ENST00000571272 OMDQ99983 421 aa17.76■□□□□ 0.43
SCARF1-205ENST00000571272 MLPHQ9BV36 600 aaPredicted RBP17.76■□□□□ 0.43
SCARF1-205ENST00000571272 GOLGA2P5Q9HBQ8 144 aa17.76■□□□□ 0.43
SCARF1-205ENST00000571272 CASS4Q9NQ75 786 aa17.76■□□□□ 0.43
SCARF1-205ENST00000571272 FIS1Q9Y3D6 152 aa17.76■□□□□ 0.43
SCARF1-205ENST00000571272 DCLK1O15075 740 aa17.75■□□□□ 0.43
SCARF1-205ENST00000571272 NRF1Q16656 503 aa17.75■□□□□ 0.43
SCARF1-205ENST00000571272 ZFP1Q6P2D0 407 aa17.75■□□□□ 0.43
SCARF1-205ENST00000571272 ZYG11AQ6WRX3 759 aa17.75■□□□□ 0.43
SCARF1-205ENST00000571272 B3GNT6Q6ZMB0 384 aa17.75■□□□□ 0.43
SCARF1-205ENST00000571272 SPNS2Q8IVW8 549 aa17.75■□□□□ 0.43
SCARF1-205ENST00000571272 PDCD6IPQ8WUM4 868 aaKnown RBP17.75■□□□□ 0.43
SCARF1-205ENST00000571272 SNX27Q96L92 541 aa17.75■□□□□ 0.43
SCARF1-205ENST00000571272 HSFY1Q96LI6 401 aa17.75■□□□□ 0.43
SCARF1-205ENST00000571272 ANLNQ9NQW6 1124 aa17.75■□□□□ 0.43
SCARF1-205ENST00000571272 IRAK4Q9NWZ3 460 aa17.75■□□□□ 0.43
SCARF1-205ENST00000571272 PTTG2Q9NZH5 202 aa17.75■□□□□ 0.43
SCARF1-205ENST00000571272 H2AFYO75367 372 aaKnown RBP17.75■□□□□ 0.43
SCARF1-205ENST00000571272 TNFAIP8O95379 198 aa17.75■□□□□ 0.43
SCARF1-205ENST00000571272 NFKB1P19838 968 aa17.75■□□□□ 0.43
SCARF1-205ENST00000571272 ZBTB17Q13105 803 aa17.75■□□□□ 0.43
SCARF1-205ENST00000571272 FBXO47Q5MNV8 452 aa17.75■□□□□ 0.43
SCARF1-205ENST00000571272 TICAM1Q8IUC6 712 aa17.75■□□□□ 0.43
SCARF1-205ENST00000571272 CRYBG2Q8N1P7 616 aa17.75■□□□□ 0.43
SCARF1-205ENST00000571272 NPWQ8N729 165 aa17.75■□□□□ 0.43
SCARF1-205ENST00000571272 ADCY4Q8NFM4 1077 aa17.75■□□□□ 0.43
SCARF1-205ENST00000571272 TSNARE1Q96NA8 513 aa17.75■□□□□ 0.43
SCARF1-205ENST00000571272 SEMA6AQ9H2E6 1030 aa17.75■□□□□ 0.43
SCARF1-205ENST00000571272 NXF3Q9H4D5 531 aaKnown RBP17.75■□□□□ 0.43
SCARF1-205ENST00000571272 SUDS3Q9H7L9 328 aaPredicted RBP17.75■□□□□ 0.43
SCARF1-205ENST00000571272 EFCAB1Q9HAE3 211 aa17.75■□□□□ 0.43
SCARF1-205ENST00000571272 ADA2Q9NZK5 511 aa17.75■□□□□ 0.43
SCARF1-205ENST00000571272 RNASEH2AO75792 299 aaKnown RBP17.74■□□□□ 0.43
SCARF1-205ENST00000571272 HOXA11P31270 313 aaPredicted RBP17.74■□□□□ 0.43
SCARF1-205ENST00000571272 SCNN1AP37088 669 aa17.74■□□□□ 0.43
SCARF1-205ENST00000571272 RPL34P49207 117 aaKnown RBP17.74■□□□□ 0.43
SCARF1-205ENST00000571272 PRKAA1Q13131 559 aa17.74■□□□□ 0.43
SCARF1-205ENST00000571272 ZBTB6Q15916 424 aa17.74■□□□□ 0.43
SCARF1-205ENST00000571272 ANO4Q32M45 955 aa17.74■□□□□ 0.43
SCARF1-205ENST00000571272 LSMEM2Q8N112 164 aa17.74■□□□□ 0.43
SCARF1-205ENST00000571272 FSTL5Q8N475 847 aaPredicted RBP17.74■□□□□ 0.43
SCARF1-205ENST00000571272 LRRC52Q8N7C0 313 aa17.74■□□□□ 0.43
SCARF1-205ENST00000571272 SLC7A14Q8TBB6 771 aa17.74■□□□□ 0.43
SCARF1-205ENST00000571272 SGF29Q96ES7 293 aa17.74■□□□□ 0.43
SCARF1-205ENST00000571272 RBPJLQ9UBG7 517 aa17.74■□□□□ 0.43
SCARF1-205ENST00000571272 COPG1Q9Y678 874 aaKnown RBP17.74■□□□□ 0.43
SCARF1-205ENST00000571272 A0A0G2JMZ2 1700 aa17.74■□□□□ 0.43
SCARF1-205ENST00000571272 LRRC37A2A6NM11 1700 aa17.74■□□□□ 0.43
SCARF1-205ENST00000571272 I6L893 689 aaPredicted RBP17.74■□□□□ 0.43
SCARF1-205ENST00000571272 HNRNPRO43390 633 aaKnown RBP17.74■□□□□ 0.43
SCARF1-205ENST00000571272 FAM58BPP0C7Q3 252 aa17.74■□□□□ 0.43
SCARF1-205ENST00000571272 AMIGO2Q86SJ2 522 aa17.74■□□□□ 0.43
SCARF1-205ENST00000571272 SLC41A1Q8IVJ1 513 aa17.74■□□□□ 0.43
SCARF1-205ENST00000571272 PCDH20Q8N6Y1 951 aaKnown RBP17.74■□□□□ 0.43
SCARF1-205ENST00000571272 NPY6RQ99463 290 aa17.74■□□□□ 0.43
SCARF1-205ENST00000571272 C1QTNF1Q9BXJ1 281 aa17.74■□□□□ 0.43
SCARF1-205ENST00000571272 MRPS26Q9BYN8 205 aaKnown RBP17.74■□□□□ 0.43
SCARF1-205ENST00000571272 FAM49AQ9H0Q0 323 aaPredicted RBP17.74■□□□□ 0.43
SCARF1-205ENST00000571272 ZBTB26Q9HCK0 441 aa17.74■□□□□ 0.43
SCARF1-205ENST00000571272 POLR2AP24928 1970 aaKnown RBP17.74■□□□□ 0.43
SCARF1-205ENST00000571272 DNAJC25-GNG10A0A024R161 153 aa17.73■□□□□ 0.43
SCARF1-205ENST00000571272 hCG_2014768A0A024R1R8 64 aa17.73■□□□□ 0.43
SCARF1-205ENST00000571272 ARSAP15289 507 aa17.73■□□□□ 0.43
SCARF1-205ENST00000571272 CYP2B6P20813 491 aa17.73■□□□□ 0.43
SCARF1-205ENST00000571272 NOS2P35228 1153 aa17.73■□□□□ 0.43
SCARF1-205ENST00000571272 SH3BGRP55822 239 aaPredicted RBP17.73■□□□□ 0.43
SCARF1-205ENST00000571272 USP46P62068 366 aa17.73■□□□□ 0.43
SCARF1-205ENST00000571272 CYTH1Q15438 398 aa17.73■□□□□ 0.43
SCARF1-205ENST00000571272 AHI1Q8N157 1196 aa17.73■□□□□ 0.43
SCARF1-205ENST00000571272 CPSF7Q8N684 471 aaKnown RBP17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms