RNA–Protein interactions for RNA: ENST00000569924.1

CNOT1-221, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-221ENST00000569924 BPIFB1Q8TDL5 484 aa3.42□□□□□ -1.86
CNOT1-221ENST00000569924 SDR42E1Q8WUS8 393 aa3.42□□□□□ -1.86
CNOT1-221ENST00000569924 ATRIPQ8WXE1 791 aa3.42□□□□□ -1.86
CNOT1-221ENST00000569924 ZCCHC14Q8WYQ9 949 aaKnown RBP3.42□□□□□ -1.86
CNOT1-221ENST00000569924 PPP2R3CQ969Q6 453 aa3.42□□□□□ -1.86
CNOT1-221ENST00000569924 KIF1BPQ96EK5 621 aa3.42□□□□□ -1.86
CNOT1-221ENST00000569924 DYNLL2Q96FJ2 89 aa3.42□□□□□ -1.86
CNOT1-221ENST00000569924 LIN37Q96GY3 246 aaPredicted RBP3.42□□□□□ -1.86
CNOT1-221ENST00000569924 CDHR1Q96JP9 859 aa3.42□□□□□ -1.86
CNOT1-221ENST00000569924 GLT1D1Q96MS3 346 aa3.42□□□□□ -1.86
CNOT1-221ENST00000569924 PHF7Q9BWX1 381 aaPredicted RBP3.42□□□□□ -1.86
CNOT1-221ENST00000569924 MRPL9Q9BYD2 267 aaKnown RBP3.42□□□□□ -1.86
CNOT1-221ENST00000569924 TTYH3Q9C0H2 523 aa3.42□□□□□ -1.86
CNOT1-221ENST00000569924 ZCWPW1Q9H0M4 648 aa3.42□□□□□ -1.86
CNOT1-221ENST00000569924 RMI1Q9H9A7 625 aa3.42□□□□□ -1.86
CNOT1-221ENST00000569924 PLEKHA2Q9HB19 425 aa3.42□□□□□ -1.86
CNOT1-221ENST00000569924 IL1RAPL2Q9NP60 686 aa3.42□□□□□ -1.86
CNOT1-221ENST00000569924 ABCF3Q9NUQ8 709 aa3.42□□□□□ -1.86
CNOT1-221ENST00000569924 FBXO28Q9NVF7 368 aa3.42□□□□□ -1.86
CNOT1-221ENST00000569924 MRPS18AQ9NVS2 196 aaKnown RBP3.42□□□□□ -1.86
CNOT1-221ENST00000569924 PAG1Q9NWQ8 432 aa3.42□□□□□ -1.86
CNOT1-221ENST00000569924 HCFC1R1Q9NWW0 138 aa3.42□□□□□ -1.86
CNOT1-221ENST00000569924 NYAP2Q9P242 653 aa3.42□□□□□ -1.86
CNOT1-221ENST00000569924 ARPP21Q9UBL0 812 aaPredicted RBP3.42□□□□□ -1.86
CNOT1-221ENST00000569924 SLC25A10Q9UBX3 287 aaPredicted RBP3.42□□□□□ -1.86
CNOT1-221ENST00000569924 FBXO40Q9UH90 709 aa3.42□□□□□ -1.86
CNOT1-221ENST00000569924 VPS51Q9UID3 782 aa3.42□□□□□ -1.86
CNOT1-221ENST00000569924 USP22Q9UPT9 525 aa3.42□□□□□ -1.86
CNOT1-221ENST00000569924 SETXQ7Z333 2677 aaKnown RBP3.42□□□□□ -1.86
CNOT1-221ENST00000569924 KDM3AQ9Y4C1 1321 aa3.42□□□□□ -1.86
CNOT1-221ENST00000569924 EYSQ5T1H1 3165 aa3.41□□□□□ -1.86
CNOT1-221ENST00000569924 MYH7P12883 1935 aa3.41□□□□□ -1.86
CNOT1-221ENST00000569924 CACNA1BQ00975 2339 aa3.41□□□□□ -1.86
CNOT1-221ENST00000569924 CYP2D7A0A087X1C5 515 aa3.41□□□□□ -1.86
CNOT1-221ENST00000569924 IGKV6D-41A0A0C4DH26 115 aa3.41□□□□□ -1.86
CNOT1-221ENST00000569924 CDHR4A6H8M9 788 aa3.41□□□□□ -1.86
CNOT1-221ENST00000569924 MYADML2A6NDP7 307 aa3.41□□□□□ -1.86
CNOT1-221ENST00000569924 SMTNL1A8MU46 457 aa3.41□□□□□ -1.86
CNOT1-221ENST00000569924 B5MCH6 92 aa3.41□□□□□ -1.86
CNOT1-221ENST00000569924 HRKO00198 91 aa3.41□□□□□ -1.86
CNOT1-221ENST00000569924 PEX12O00623 359 aa3.41□□□□□ -1.86
CNOT1-221ENST00000569924 CTAGE5O15320 804 aa3.41□□□□□ -1.86
CNOT1-221ENST00000569924 CD3EAPO15446 510 aaKnown RBP3.41□□□□□ -1.86
CNOT1-221ENST00000569924 TBCAO75347 108 aaKnown RBP3.41□□□□□ -1.86
CNOT1-221ENST00000569924 VPS4BO75351 444 aa3.41□□□□□ -1.86
CNOT1-221ENST00000569924 CCNDBP1O95273 360 aa3.41□□□□□ -1.86
CNOT1-221ENST00000569924 TGFB1P01137 390 aa3.41□□□□□ -1.86
CNOT1-221ENST00000569924 ASGR1P07306 291 aa3.41□□□□□ -1.86
CNOT1-221ENST00000569924 ATF2P15336 505 aa3.41□□□□□ -1.86
CNOT1-221ENST00000569924 CSF2RAP15509 400 aa3.41□□□□□ -1.86
CNOT1-221ENST00000569924 HOXC13P31276 330 aa3.41□□□□□ -1.86
CNOT1-221ENST00000569924 PSMB10P40306 273 aa3.41□□□□□ -1.86
CNOT1-221ENST00000569924 HADHAP40939 763 aa3.41□□□□□ -1.86
CNOT1-221ENST00000569924 GPD2P43304 727 aa3.41□□□□□ -1.86
CNOT1-221ENST00000569924 HARS2P49590 506 aaKnown RBP3.41□□□□□ -1.86
CNOT1-221ENST00000569924 CLK1P49759 484 aaKnown RBP3.41□□□□□ -1.86
CNOT1-221ENST00000569924 TOB1P50616 345 aaPredicted RBP3.41□□□□□ -1.86
CNOT1-221ENST00000569924 AFF3P51826 1226 aaKnown RBP3.41□□□□□ -1.86
CNOT1-221ENST00000569924 OAZ1P54368 228 aa3.41□□□□□ -1.86
CNOT1-221ENST00000569924 SNX16P57768 344 aa3.41□□□□□ -1.86
CNOT1-221ENST00000569924 RAP2BP61225 183 aa3.41□□□□□ -1.86
CNOT1-221ENST00000569924 ADAM8P78325 824 aa3.41□□□□□ -1.86
CNOT1-221ENST00000569924 MRPS5P82675 430 aaKnown RBP3.41□□□□□ -1.86
CNOT1-221ENST00000569924 ATP2C1P98194 919 aaPredicted RBP3.41□□□□□ -1.86
CNOT1-221ENST00000569924 LRMPQ12912 555 aa3.41□□□□□ -1.86
CNOT1-221ENST00000569924 FHL3Q13643 280 aa3.41□□□□□ -1.86
CNOT1-221ENST00000569924 BOP1Q14137 746 aaKnown RBP3.41□□□□□ -1.86
CNOT1-221ENST00000569924 PUM1Q14671 1186 aaKnown RBP eCLIP3.41□□□□□ -1.86
CNOT1-221ENST00000569924 BMT2Q1RMZ1 405 aa3.41□□□□□ -1.86
CNOT1-221ENST00000569924 ZIK1Q3SY52 487 aaPredicted RBP3.41□□□□□ -1.86
CNOT1-221ENST00000569924 SBK1Q52WX2 424 aa3.41□□□□□ -1.86
CNOT1-221ENST00000569924 ZNF569Q5MCW4 686 aa3.41□□□□□ -1.86
CNOT1-221ENST00000569924 SNRNP48Q6IEG0 339 aaKnown RBP3.41□□□□□ -1.86
CNOT1-221ENST00000569924 DENND1BQ6P3S1 775 aa3.41□□□□□ -1.86
CNOT1-221ENST00000569924 CTR9Q6PD62 1173 aa3.41□□□□□ -1.86
CNOT1-221ENST00000569924 TRMT10BQ6PF06 316 aaKnown RBP3.41□□□□□ -1.86
CNOT1-221ENST00000569924 CYP20A1Q6UW02 462 aa3.41□□□□□ -1.86
CNOT1-221ENST00000569924 IKBIPQ70UQ0 350 aa3.41□□□□□ -1.86
CNOT1-221ENST00000569924 RHOT2Q8IXI1 618 aa3.41□□□□□ -1.86
CNOT1-221ENST00000569924 LRRC71Q8N4P6 559 aa3.41□□□□□ -1.86
CNOT1-221ENST00000569924 LINC00482Q8N8I6 264 aa3.41□□□□□ -1.86
CNOT1-221ENST00000569924 ANKRD53Q8N9V6 530 aa3.41□□□□□ -1.86
CNOT1-221ENST00000569924 LSM14AQ8ND56 463 aaKnown RBP3.41□□□□□ -1.86
CNOT1-221ENST00000569924 GMCL1P1Q8NEA9 526 aa3.41□□□□□ -1.86
CNOT1-221ENST00000569924 CHST13Q8NET6 341 aa3.41□□□□□ -1.86
CNOT1-221ENST00000569924 TOR1AIP2Q8NFQ8 470 aa3.41□□□□□ -1.86
CNOT1-221ENST00000569924 SUN3Q8TAQ9 357 aa3.41□□□□□ -1.86
CNOT1-221ENST00000569924 TBC1D15Q8TC07 691 aa3.41□□□□□ -1.86
CNOT1-221ENST00000569924 FNIP1Q8TF40 1166 aa3.41□□□□□ -1.86
CNOT1-221ENST00000569924 HIC2Q96JB3 615 aa3.41□□□□□ -1.86
CNOT1-221ENST00000569924 PPP1R10Q96QC0 940 aaKnown RBP3.41□□□□□ -1.86
CNOT1-221ENST00000569924 HIST1H2AAQ96QV6 131 aa3.41□□□□□ -1.86
CNOT1-221ENST00000569924 WDR24Q96S15 920 aa3.41□□□□□ -1.86
CNOT1-221ENST00000569924 MECRQ9BV79 373 aa3.41□□□□□ -1.86
CNOT1-221ENST00000569924 EDEM3Q9BZQ6 932 aa3.41□□□□□ -1.86
CNOT1-221ENST00000569924 SLC6A17Q9H1V8 727 aa3.41□□□□□ -1.86
CNOT1-221ENST00000569924 OR10A2Q9H208 303 aa3.41□□□□□ -1.86
CNOT1-221ENST00000569924 MTIF3Q9H2K0 278 aaKnown RBP3.41□□□□□ -1.86
CNOT1-221ENST00000569924 RANBP17Q9H2T7 1088 aaKnown RBP3.41□□□□□ -1.86
CNOT1-221ENST00000569924 SLC38A10Q9HBR0 1119 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms