RNA–Protein interactions for RNA: ENST00000568782.1

UBR1-207, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 615 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-207	ENST00000568782		Q6ZVU0	165 aa		10.61	□□□□□ -0.71
UBR1-207	ENST00000568782	TMC6	Q7Z403	805 aa		10.61	□□□□□ -0.71
UBR1-207	ENST00000568782	BNIPL	Q7Z465	357 aa		10.61	□□□□□ -0.71
UBR1-207	ENST00000568782	RYBP	Q8N488	228 aa	Predicted RBP	10.61	□□□□□ -0.71
UBR1-207	ENST00000568782	PIP4K2C	Q8TBX8	421 aa		10.61	□□□□□ -0.71
UBR1-207	ENST00000568782	BAP1	Q92560	729 aa		10.61	□□□□□ -0.71
UBR1-207	ENST00000568782	CENPI	Q92674	756 aa	Predicted RBP	10.61	□□□□□ -0.71
UBR1-207	ENST00000568782	ALG14	Q96F25	216 aa		10.61	□□□□□ -0.71
UBR1-207	ENST00000568782	NAP1L5	Q96NT1	182 aa	Predicted RBP	10.61	□□□□□ -0.71
UBR1-207	ENST00000568782	FAM129B	Q96TA1	746 aa		10.61	□□□□□ -0.71
UBR1-207	ENST00000568782	FUCA2	Q9BTY2	467 aa		10.61	□□□□□ -0.71
UBR1-207	ENST00000568782	ADAM33	Q9BZ11	813 aa		10.61	□□□□□ -0.71
UBR1-207	ENST00000568782	CEP44	Q9C0F1	390 aa		10.61	□□□□□ -0.71
UBR1-207	ENST00000568782	MAGEH1	Q9H213	219 aa		10.61	□□□□□ -0.71
UBR1-207	ENST00000568782	OSGEP	Q9NPF4	335 aa		10.61	□□□□□ -0.71
UBR1-207	ENST00000568782	AASDHPPT	Q9NRN7	309 aa		10.61	□□□□□ -0.71
UBR1-207	ENST00000568782	TMPRSS4	Q9NRS4	437 aa		10.61	□□□□□ -0.71
UBR1-207	ENST00000568782	DNAI1	Q9UI46	699 aa		10.61	□□□□□ -0.71
UBR1-207	ENST00000568782	VPS51	Q9UID3	782 aa		10.61	□□□□□ -0.71
UBR1-207	ENST00000568782	LUC7L2	Q9Y383	392 aa	Known RBP	10.61	□□□□□ -0.71
UBR1-207	ENST00000568782	UCHL5	Q9Y5K5	329 aa	Known RBP eCLIP	10.61	□□□□□ -0.71
UBR1-207	ENST00000568782	CACNA1E	Q15878	2313 aa		10.61	□□□□□ -0.71
UBR1-207	ENST00000568782	PCNX2	A6NKB5	2137 aa		10.6	□□□□□ -0.71
UBR1-207	ENST00000568782	TP53BP1	Q12888	1972 aa	Predicted RBP	10.6	□□□□□ -0.71
UBR1-207	ENST00000568782		A0A0D9SEW6	157 aa		10.6	□□□□□ -0.71
UBR1-207	ENST00000568782	CXorf51A	A0A1B0GTR3	108 aa		10.6	□□□□□ -0.71
UBR1-207	ENST00000568782		A0A1W2PPC4	97 aa		10.6	□□□□□ -0.71
UBR1-207	ENST00000568782		A0A1W2PQJ5	194 aa		10.6	□□□□□ -0.71
UBR1-207	ENST00000568782	EIF3CL	B5ME19	914 aa	Known RBP	10.6	□□□□□ -0.71
UBR1-207	ENST00000568782	CCP110	O43303	1012 aa		10.6	□□□□□ -0.71
UBR1-207	ENST00000568782	SNAP91	O60641	907 aa		10.6	□□□□□ -0.71
UBR1-207	ENST00000568782	RAMP2	O60895	175 aa		10.6	□□□□□ -0.71
UBR1-207	ENST00000568782	LRIG2	O94898	1065 aa		10.6	□□□□□ -0.71
UBR1-207	ENST00000568782	GJB6	O95452	261 aa		10.6	□□□□□ -0.71
UBR1-207	ENST00000568782	SRC	P12931	536 aa		10.6	□□□□□ -0.71
UBR1-207	ENST00000568782	RRM1	P23921	792 aa		10.6	□□□□□ -0.71
UBR1-207	ENST00000568782	L1CAM	P32004	1257 aa		10.6	□□□□□ -0.71
UBR1-207	ENST00000568782	CHRNA3	P32297	505 aa		10.6	□□□□□ -0.71
UBR1-207	ENST00000568782	HTR7	P34969	479 aa		10.6	□□□□□ -0.71
UBR1-207	ENST00000568782	PRKCI	P41743	596 aa		10.6	□□□□□ -0.71
UBR1-207	ENST00000568782	GRIA4	P48058	902 aa		10.6	□□□□□ -0.71
UBR1-207	ENST00000568782	CSNK1E	P49674	416 aa	Known RBP	10.6	□□□□□ -0.71
UBR1-207	ENST00000568782	CCR5	P51681	352 aa		10.6	□□□□□ -0.71
UBR1-207	ENST00000568782	HDAC4	P56524	1084 aa		10.6	□□□□□ -0.71
UBR1-207	ENST00000568782	RPL7A	P62424	266 aa	Known RBP	10.6	□□□□□ -0.71
UBR1-207	ENST00000568782	RACK1	P63244	317 aa	Known RBP	10.6	□□□□□ -0.71
UBR1-207	ENST00000568782	SCAP	Q12770	1279 aa		10.6	□□□□□ -0.71
UBR1-207	ENST00000568782	GRIK2	Q13002	908 aa		10.6	□□□□□ -0.71
UBR1-207	ENST00000568782	NFKBIB	Q15653	356 aa		10.6	□□□□□ -0.71
UBR1-207	ENST00000568782	INAVA	Q3KP66	663 aa		10.6	□□□□□ -0.71
UBR1-207	ENST00000568782	ZNF683	Q8IZ20	524 aa		10.6	□□□□□ -0.71
UBR1-207	ENST00000568782	PCDH20	Q8N6Y1	951 aa	Known RBP	10.6	□□□□□ -0.71
UBR1-207	ENST00000568782	TMIE	Q8NEW7	156 aa		10.6	□□□□□ -0.71
UBR1-207	ENST00000568782	OR7D4	Q8NG98	312 aa		10.6	□□□□□ -0.71
UBR1-207	ENST00000568782	SETD7	Q8WTS6	366 aa	Known RBP	10.6	□□□□□ -0.71
UBR1-207	ENST00000568782	FRS2	Q8WU20	508 aa		10.6	□□□□□ -0.71
UBR1-207	ENST00000568782	CPLX3	Q8WVH0	158 aa		10.6	□□□□□ -0.71
UBR1-207	ENST00000568782	SYN2	Q92777	582 aa	Predicted RBP	10.6	□□□□□ -0.71
UBR1-207	ENST00000568782	ZNF653	Q96CK0	615 aa		10.6	□□□□□ -0.71
UBR1-207	ENST00000568782	EIF3C	Q99613	913 aa	Known RBP	10.6	□□□□□ -0.71
UBR1-207	ENST00000568782	GAREM1	Q9H706	876 aa		10.6	□□□□□ -0.71
UBR1-207	ENST00000568782	FSCN3	Q9NQT6	498 aa		10.6	□□□□□ -0.71
UBR1-207	ENST00000568782	ANLN	Q9NQW6	1124 aa		10.6	□□□□□ -0.71
UBR1-207	ENST00000568782	DNAAF2	Q9NVR5	837 aa	Known RBP	10.6	□□□□□ -0.71
UBR1-207	ENST00000568782	TMEM248	Q9NWD8	314 aa		10.6	□□□□□ -0.71
UBR1-207	ENST00000568782	MYO1A	Q9UBC5	1043 aa		10.6	□□□□□ -0.71
UBR1-207	ENST00000568782	CNOT8	Q9UFF9	292 aa	Known RBP	10.6	□□□□□ -0.71
UBR1-207	ENST00000568782	IL36A	Q9UHA7	158 aa		10.6	□□□□□ -0.71
UBR1-207	ENST00000568782	OR51B4	Q9Y5P0	310 aa		10.6	□□□□□ -0.71
UBR1-207	ENST00000568782	TMEM131	Q92545	1883 aa		10.59	□□□□□ -0.71
UBR1-207	ENST00000568782		A0A1B0GVT2	93 aa		10.59	□□□□□ -0.71
UBR1-207	ENST00000568782	UPK3BL1	B0FP48	263 aa		10.59	□□□□□ -0.71
UBR1-207	ENST00000568782	UPK3BL2	E5RIL1	263 aa		10.59	□□□□□ -0.71
UBR1-207	ENST00000568782	FGF10	O15520	208 aa	Predicted RBP	10.59	□□□□□ -0.71
UBR1-207	ENST00000568782	PRPSAP2	O60256	369 aa		10.59	□□□□□ -0.71
UBR1-207	ENST00000568782	SERPING1	P05155	500 aa		10.59	□□□□□ -0.71
UBR1-207	ENST00000568782	SKIL	P12757	684 aa		10.59	□□□□□ -0.71
UBR1-207	ENST00000568782	VAV1	P15498	845 aa		10.59	□□□□□ -0.71
UBR1-207	ENST00000568782	SERPINH1	P50454	418 aa	Known RBP	10.59	□□□□□ -0.71
UBR1-207	ENST00000568782	ADPRH	P54922	357 aa		10.59	□□□□□ -0.71
UBR1-207	ENST00000568782	YBEY	P58557	167 aa	Predicted RBP	10.59	□□□□□ -0.71
UBR1-207	ENST00000568782	TPI1	P60174	286 aa		10.59	□□□□□ -0.71
UBR1-207	ENST00000568782	SNRPD1	P62314	119 aa	Known RBP	10.59	□□□□□ -0.71
UBR1-207	ENST00000568782	ZBED6	P86452	979 aa		10.59	□□□□□ -0.71
UBR1-207	ENST00000568782	ZNF252P-AS1	Q0IIN9	211 aa		10.59	□□□□□ -0.71
UBR1-207	ENST00000568782	SEMA3B	Q13214	749 aa		10.59	□□□□□ -0.71
UBR1-207	ENST00000568782	MAMLD1	Q13495	774 aa		10.59	□□□□□ -0.71
UBR1-207	ENST00000568782	STAT4	Q14765	748 aa		10.59	□□□□□ -0.71
UBR1-207	ENST00000568782	SETMAR	Q53H47	684 aa	Predicted RBP	10.59	□□□□□ -0.71
UBR1-207	ENST00000568782	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	10.59	□□□□□ -0.71
UBR1-207	ENST00000568782	C22orf39	Q6P5X5	142 aa		10.59	□□□□□ -0.71
UBR1-207	ENST00000568782	FBXL19	Q6PCT2	694 aa		10.59	□□□□□ -0.71
UBR1-207	ENST00000568782	LINGO4	Q6UY18	593 aa		10.59	□□□□□ -0.71
UBR1-207	ENST00000568782	CCDC185	Q8N715	623 aa		10.59	□□□□□ -0.71
UBR1-207	ENST00000568782	DEFB124	Q8NES8	71 aa		10.59	□□□□□ -0.71
UBR1-207	ENST00000568782	OR52K2	Q8NGK3	314 aa		10.59	□□□□□ -0.71
UBR1-207	ENST00000568782	SERAC1	Q96JX3	654 aa		10.59	□□□□□ -0.71
UBR1-207	ENST00000568782	PSMB7	Q99436	277 aa		10.59	□□□□□ -0.71
UBR1-207	ENST00000568782	HEPH	Q9BQS7	1158 aa		10.59	□□□□□ -0.71
UBR1-207	ENST00000568782	ANP32E	Q9BTT0	268 aa		10.59	□□□□□ -0.71

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