RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 NAPEPLDQ6IQ20 393 aa7.2□□□□□ -1.26
SMG1-215ENST00000568239 KLHDC10Q6PID8 442 aa7.2□□□□□ -1.26
SMG1-215ENST00000568239 ADGRD1Q6QNK2 874 aa7.2□□□□□ -1.26
SMG1-215ENST00000568239 TMEM150AQ86TG1 271 aa7.2□□□□□ -1.26
SMG1-215ENST00000568239 TDRPQ86YL5 185 aa7.2□□□□□ -1.26
SMG1-215ENST00000568239 HS6ST3Q8IZP7 471 aa7.2□□□□□ -1.26
SMG1-215ENST00000568239 ELMOD1Q8N336 334 aa7.2□□□□□ -1.26
SMG1-215ENST00000568239 ZSCAN18Q8TBC5 510 aaPredicted RBP7.2□□□□□ -1.26
SMG1-215ENST00000568239 SLC22A17Q8WUG5 538 aa7.2□□□□□ -1.26
SMG1-215ENST00000568239 MRPS31Q92665 395 aaKnown RBP7.2□□□□□ -1.26
SMG1-215ENST00000568239 DPF3Q92784 378 aa7.2□□□□□ -1.26
SMG1-215ENST00000568239 CLP1Q92989 425 aaKnown RBP7.2□□□□□ -1.26
SMG1-215ENST00000568239 WBP2Q969T9 261 aa7.2□□□□□ -1.26
SMG1-215ENST00000568239 TRMT2BQ96GJ1 504 aaKnown RBP7.2□□□□□ -1.26
SMG1-215ENST00000568239 CORO1BQ9BR76 489 aa7.2□□□□□ -1.26
SMG1-215ENST00000568239 C17orf80Q9BSJ5 609 aa7.2□□□□□ -1.26
SMG1-215ENST00000568239 LRRC40Q9H9A6 602 aa7.2□□□□□ -1.26
SMG1-215ENST00000568239 PPCSQ9HAB8 311 aa7.2□□□□□ -1.26
SMG1-215ENST00000568239 UGT1A7Q9HAW7 530 aa7.2□□□□□ -1.26
SMG1-215ENST00000568239 UGT1A10Q9HAW8 530 aa7.2□□□□□ -1.26
SMG1-215ENST00000568239 UGT1A8Q9HAW9 530 aa7.2□□□□□ -1.26
SMG1-215ENST00000568239 EURLQ9NYK6 297 aa7.2□□□□□ -1.26
SMG1-215ENST00000568239 AGO1Q9UL18 857 aaKnown RBP7.2□□□□□ -1.26
SMG1-215ENST00000568239 PCDHA11Q9Y5I1 949 aa7.2□□□□□ -1.26
SMG1-215ENST00000568239 IQANK1A0A1B0GTG1 560 aa7.2□□□□□ -1.26
SMG1-215ENST00000568239 A0A1W2PRU2 124 aa7.2□□□□□ -1.26
SMG1-215ENST00000568239 DRGXA6NNA5 263 aa7.2□□□□□ -1.26
SMG1-215ENST00000568239 ERI2A8K979 691 aaKnown RBP7.2□□□□□ -1.26
SMG1-215ENST00000568239 LPXNO60711 386 aa7.2□□□□□ -1.26
SMG1-215ENST00000568239 ANXA9O76027 345 aa7.2□□□□□ -1.26
SMG1-215ENST00000568239 OAS1P00973 400 aaKnown RBP7.2□□□□□ -1.26
SMG1-215ENST00000568239 MT-ND3P03897 115 aa7.2□□□□□ -1.26
SMG1-215ENST00000568239 POLBP06746 335 aa7.2□□□□□ -1.26
SMG1-215ENST00000568239 LINC00271P0C7V0 271 aa7.2□□□□□ -1.26
SMG1-215ENST00000568239 PGAM1P18669 254 aa7.2□□□□□ -1.26
SMG1-215ENST00000568239 BMPR1AP36894 532 aa7.2□□□□□ -1.26
SMG1-215ENST00000568239 PPP3CCP48454 512 aa7.2□□□□□ -1.26
SMG1-215ENST00000568239 MTA1Q13330 715 aa7.2□□□□□ -1.26
SMG1-215ENST00000568239 HNRNPDQ14103 355 aaKnown RBP7.2□□□□□ -1.26
SMG1-215ENST00000568239 SEPT7Q16181 437 aaKnown RBP7.2□□□□□ -1.26
SMG1-215ENST00000568239 ZSCAN26Q16670 478 aa7.2□□□□□ -1.26
SMG1-215ENST00000568239 AFMIDQ63HM1 303 aa7.2□□□□□ -1.26
SMG1-215ENST00000568239 CCDC149Q6ZUS6 474 aa7.2□□□□□ -1.26
SMG1-215ENST00000568239 UBE2Q1Q7Z7E8 422 aa7.2□□□□□ -1.26
SMG1-215ENST00000568239 SLC26A11Q86WA9 606 aa7.2□□□□□ -1.26
SMG1-215ENST00000568239 LRRC49Q8IUZ0 686 aa7.2□□□□□ -1.26
SMG1-215ENST00000568239 OR7D4Q8NG98 312 aa7.2□□□□□ -1.26
SMG1-215ENST00000568239 DCAKDQ8WVC6 231 aa7.2□□□□□ -1.26
SMG1-215ENST00000568239 ARNTL2Q8WYA1 636 aa7.2□□□□□ -1.26
SMG1-215ENST00000568239 CDKL2Q92772 493 aa7.2□□□□□ -1.26
SMG1-215ENST00000568239 ZNF669Q96BR6 464 aaPredicted RBP7.2□□□□□ -1.26
SMG1-215ENST00000568239 PLD4Q96BZ4 506 aa7.2□□□□□ -1.26
SMG1-215ENST00000568239 IL12RB2Q99665 862 aa7.2□□□□□ -1.26
SMG1-215ENST00000568239 FICDQ9BVA6 458 aa7.2□□□□□ -1.26
SMG1-215ENST00000568239 EPN3Q9H201 632 aa7.2□□□□□ -1.26
SMG1-215ENST00000568239 MTIF3Q9H2K0 278 aaKnown RBP7.2□□□□□ -1.26
SMG1-215ENST00000568239 PLAC1Q9HBJ0 212 aa7.2□□□□□ -1.26
SMG1-215ENST00000568239 RXFP1Q9HBX9 757 aa7.2□□□□□ -1.26
SMG1-215ENST00000568239 SMYD2Q9NRG4 433 aa7.2□□□□□ -1.26
SMG1-215ENST00000568239 SLC17A6Q9P2U8 582 aa7.2□□□□□ -1.26
SMG1-215ENST00000568239 STK39Q9UEW8 545 aa7.2□□□□□ -1.26
SMG1-215ENST00000568239 CPQQ9Y646 472 aa7.2□□□□□ -1.26
SMG1-215ENST00000568239 PLXNA4Q9HCM2 1894 aa7.2□□□□□ -1.26
SMG1-215ENST00000568239 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP7.19□□□□□ -1.26
SMG1-215ENST00000568239 GRXCR1A8MXD5 290 aa7.19□□□□□ -1.26
SMG1-215ENST00000568239 F11P03951 625 aa7.19□□□□□ -1.26
SMG1-215ENST00000568239 ERVK-10P10266 1014 aa7.19□□□□□ -1.26
SMG1-215ENST00000568239 SGSHP51688 502 aa7.19□□□□□ -1.26
SMG1-215ENST00000568239 CDH17Q12864 832 aa7.19□□□□□ -1.26
SMG1-215ENST00000568239 ZNF177Q13360 481 aaPredicted RBP7.19□□□□□ -1.26
SMG1-215ENST00000568239 BMPR2Q13873 1038 aa7.19□□□□□ -1.26
SMG1-215ENST00000568239 MPP2Q14168 576 aa7.19□□□□□ -1.26
SMG1-215ENST00000568239 POU6F1Q14863 301 aa7.19□□□□□ -1.26
SMG1-215ENST00000568239 CRYMQ14894 314 aa7.19□□□□□ -1.26
SMG1-215ENST00000568239 ADGRF1Q5T601 910 aa7.19□□□□□ -1.26
SMG1-215ENST00000568239 ACBD5Q5T8D3 534 aaPredicted RBP7.19□□□□□ -1.26
SMG1-215ENST00000568239 MROH9Q5TGP6 573 aa7.19□□□□□ -1.26
SMG1-215ENST00000568239 KCTD11Q693B1 232 aa7.19□□□□□ -1.26
SMG1-215ENST00000568239 GAREM2Q75VX8 874 aa7.19□□□□□ -1.26
SMG1-215ENST00000568239 SLC25A41Q8N5S1 370 aa7.19□□□□□ -1.26
SMG1-215ENST00000568239 SLC44A1Q8WWI5 657 aa7.19□□□□□ -1.26
SMG1-215ENST00000568239 MFSD3Q96ES6 412 aa7.19□□□□□ -1.26
SMG1-215ENST00000568239 GCNAQ96QF7 691 aa7.19□□□□□ -1.26
SMG1-215ENST00000568239 FCRL5Q96RD9 977 aa7.19□□□□□ -1.26
SMG1-215ENST00000568239 KLF16Q9BXK1 252 aaPredicted RBP7.19□□□□□ -1.26
SMG1-215ENST00000568239 MUC3BQ9H195 1237 aa7.19□□□□□ -1.26
SMG1-215ENST00000568239 TLR9Q9NR96 1032 aa7.19□□□□□ -1.26
SMG1-215ENST00000568239 CHRAC1Q9NRG0 131 aa7.19□□□□□ -1.26
SMG1-215ENST00000568239 TXNDC16Q9P2K2 825 aa7.19□□□□□ -1.26
SMG1-215ENST00000568239 ACTL7AQ9Y615 435 aa7.19□□□□□ -1.26
SMG1-215ENST00000568239 FAM169AQ9Y6X4 670 aa7.19□□□□□ -1.26
SMG1-215ENST00000568239 C5orf42Q9H799 3197 aa7.19□□□□□ -1.26
SMG1-215ENST00000568239 ALPK3Q96L96 1907 aa7.19□□□□□ -1.26
SMG1-215ENST00000568239 GMNCA6NCL1 334 aa7.19□□□□□ -1.26
SMG1-215ENST00000568239 FAM47DPA6NHR8 397 aa7.19□□□□□ -1.26
SMG1-215ENST00000568239 GOLGA8TH3BQL2 631 aa7.19□□□□□ -1.26
SMG1-215ENST00000568239 CBX4O00257 560 aa7.19□□□□□ -1.26
SMG1-215ENST00000568239 RFPL2O75678 378 aa7.19□□□□□ -1.26
SMG1-215ENST00000568239 RHOCP08134 193 aa7.19□□□□□ -1.26
SMG1-215ENST00000568239 VIMP08670 466 aaKnown RBP7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms