RNA–Protein interactions for RNA: ENST00000566029.5

CHD9-218, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 13,110 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-218ENST00000566029 GLMNQ92990 594 aa2.96□□□□□ -1.93
CHD9-218ENST00000566029 MYH6P13533 1939 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 LIASO43766 372 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 ZBTB14O43829 449 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 PRKCGP05129 697 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 PTPN7P35236 360 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 PSME3P61289 254 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 PRKCZQ05513 592 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 MSS51Q4VC12 460 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 GPR107Q5VW38 600 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 HELQQ8TDG4 1101 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 ALKBH8Q96BT7 664 aaKnown RBP2.96□□□□□ -1.94
CHD9-218ENST00000566029 THAP11Q96EK4 314 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 SIPA1Q96FS4 1042 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 MSANTD3Q96H12 275 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 CIB1Q99828 191 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 TMEM70Q9BUB7 260 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 PKD2L2Q9NZM6 624 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 MID2Q9UJV3 735 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 KIAA1024Q9UPX6 916 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 TBX22Q9Y458 520 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 RGPD3A6NKT7 1758 aaPredicted RBP2.96□□□□□ -1.94
CHD9-218ENST00000566029 RGPD4Q7Z3J3 1758 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 SLC37A4O43826 429 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 ASS1P00966 412 aaKnown RBP2.96□□□□□ -1.94
CHD9-218ENST00000566029 CLUP10909 449 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 BMP2P12643 396 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 FMO5P49326 533 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 GAD2Q05329 585 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 CEP55Q53EZ4 464 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 SLC10A5Q5PT55 438 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 KRT39Q6A163 491 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 LINC00299Q6ZSB3 139 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 KIAA0408Q6ZU52 694 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 C6orf120Q7Z4R8 191 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 PHTF2Q8N3S3 785 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 CPT1BQ92523 772 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 TUBGCP3Q96CW5 907 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 YME1L1Q96TA2 773 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 ATP13A3Q9H7F0 1226 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 ADPRHL2Q9NX46 363 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 LRP2BPQ9P2M1 347 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 DLGAP1O14490 977 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 PMM2O15305 246 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 MTSS1O43312 755 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 TMCC2O75069 709 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 PHKG2P15735 406 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 NUDT1P36639 197 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 TPTEP56180 551 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 ADAM17P78536 824 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 MAMLD1Q13495 774 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 IKBKEQ14164 716 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 KRT33BQ14525 404 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 NCLNQ969V3 563 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 VCPIP1Q96JH7 1222 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 UBXN10Q96LJ8 280 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 FERD3LQ96RJ6 166 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 PKP4Q99569 1192 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 SGIP1Q9BQI5 828 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 POLR1BQ9H9Y6 1135 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 C6orf50Q9HD87 102 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 XPNPEP1Q9NQW7 623 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 SLAIN2Q9P270 581 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 PSME2Q9UL46 239 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 ARHGAP26Q9UNA1 814 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 MAPRE3Q9UPY8 281 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 OR5K3A6NET4 321 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 GAS2O43903 313 aaKnown RBP2.96□□□□□ -1.94
CHD9-218ENST00000566029 SORBS2O94875 1100 aaKnown RBP2.96□□□□□ -1.94
CHD9-218ENST00000566029 CPNE6O95741 557 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 BPGMP07738 259 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 SNRPFP62306 86 aaKnown RBP2.96□□□□□ -1.94
CHD9-218ENST00000566029 DYNLL1P63167 89 aaKnown RBP2.96□□□□□ -1.94
CHD9-218ENST00000566029 CREMQ03060 361 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 MAPRE2Q15555 327 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 BRMS1LQ5PSV4 323 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 C1orf220Q5T0J3 134 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 STXBP5Q5T5C0 1151 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 SPOCD1Q6ZMY3 1216 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 PRPF39Q86UA1 669 aaKnown RBP2.96□□□□□ -1.94
CHD9-218ENST00000566029 DEPDC1BQ8WUY9 529 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 STON2Q8WXE9 905 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 HAS1Q92839 578 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 NOL6Q9H6R4 1146 aaKnown RBP2.96□□□□□ -1.94
CHD9-218ENST00000566029 FARSBQ9NSD9 589 aaKnown RBP2.96□□□□□ -1.94
CHD9-218ENST00000566029 STAU2Q9NUL3 570 aaKnown RBP eCLIP2.96□□□□□ -1.94
CHD9-218ENST00000566029 SNTG2Q9NY99 539 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 CYTH4Q9UIA0 394 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 EIF3LQ9Y262 564 aaKnown RBP2.96□□□□□ -1.94
CHD9-218ENST00000566029 TCHHQ07283 1943 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 PER2O15055 1255 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 ICMTO60725 284 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 SPNP16150 400 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 MYF6P23409 242 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 IDUAP35475 653 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 PSMD8P48556 350 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 RAB14P61106 215 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 ESRRGP62508 458 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 RUNX1T1Q06455 604 aa2.96□□□□□ -1.94
CHD9-218ENST00000566029 UBAP2LQ14157 1087 aaKnown RBP2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms