RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 FRYQ5TBA9 3013 aa13.96□□□□□ -0.18
VPS9D1-204ENST00000565023 ZFYVE26Q68DK2 2539 aa13.95□□□□□ -0.18
VPS9D1-204ENST00000565023 IGLV3-10A0A075B6K4 115 aa13.95□□□□□ -0.18
VPS9D1-204ENST00000565023 TBC1D3DA0A087WVF3 549 aa13.95□□□□□ -0.18
VPS9D1-204ENST00000565023 TBC1D3IA0A087WXS9 549 aa13.95□□□□□ -0.18
VPS9D1-204ENST00000565023 TBC1D3EA0A087X179 549 aa13.95□□□□□ -0.18
VPS9D1-204ENST00000565023 TBC1D3KA0A087X1G2 549 aa13.95□□□□□ -0.18
VPS9D1-204ENST00000565023 SPAARA0A1B0GVQ0 90 aa13.95□□□□□ -0.18
VPS9D1-204ENST00000565023 TBC1D3FA6NER0 549 aaPredicted RBP13.95□□□□□ -0.18
VPS9D1-204ENST00000565023 LRRC72A6NJI9 287 aa13.95□□□□□ -0.18
VPS9D1-204ENST00000565023 SIGLEC16A6NMB1 481 aa13.95□□□□□ -0.18
VPS9D1-204ENST00000565023 TBC1D3LB9A6J9 549 aa13.95□□□□□ -0.18
VPS9D1-204ENST00000565023 FAM72CH0Y354 149 aa13.95□□□□□ -0.18
VPS9D1-204ENST00000565023 KCNK3O14649 394 aa13.95□□□□□ -0.18
VPS9D1-204ENST00000565023 SMAD6O43541 496 aaKnown RBP13.95□□□□□ -0.18
VPS9D1-204ENST00000565023 ATP9BO43861 1147 aa13.95□□□□□ -0.18
VPS9D1-204ENST00000565023 TBC1D3HP0C7X1 549 aa13.95□□□□□ -0.18
VPS9D1-204ENST00000565023 SKILP12757 684 aa13.95□□□□□ -0.18
VPS9D1-204ENST00000565023 CASP14P31944 242 aa13.95□□□□□ -0.18
VPS9D1-204ENST00000565023 DNA2P51530 1060 aa13.95□□□□□ -0.18
VPS9D1-204ENST00000565023 BNC1Q01954 994 aa13.95□□□□□ -0.18
VPS9D1-204ENST00000565023 GNA12Q03113 381 aa13.95□□□□□ -0.18
VPS9D1-204ENST00000565023 C1QBPQ07021 282 aaKnown RBP13.95□□□□□ -0.18
VPS9D1-204ENST00000565023 KLHL30Q0D2K2 578 aa13.95□□□□□ -0.18
VPS9D1-204ENST00000565023 TRIM14Q14142 442 aa13.95□□□□□ -0.18
VPS9D1-204ENST00000565023 FAM72AQ5TYM5 149 aa13.95□□□□□ -0.18
VPS9D1-204ENST00000565023 TBC1D3GQ6DHY5 549 aa13.95□□□□□ -0.18
VPS9D1-204ENST00000565023 TBC1D3CQ6IPX1 549 aa13.95□□□□□ -0.18
VPS9D1-204ENST00000565023 FAM72DQ6L9T8 149 aa13.95□□□□□ -0.18
VPS9D1-204ENST00000565023 LEKR1Q6ZMV7 388 aa13.95□□□□□ -0.18
VPS9D1-204ENST00000565023 ZNF571Q7Z3V5 609 aaPredicted RBP13.95□□□□□ -0.18
VPS9D1-204ENST00000565023 FAM72BQ86X60 149 aa13.95□□□□□ -0.18
VPS9D1-204ENST00000565023 ZNF354CQ86Y25 554 aa13.95□□□□□ -0.18
VPS9D1-204ENST00000565023 MCOLN2Q8IZK6 566 aa13.95□□□□□ -0.18
VPS9D1-204ENST00000565023 TBC1D3Q8IZP1 549 aaPredicted RBP13.95□□□□□ -0.18
VPS9D1-204ENST00000565023 PYROXD2Q8N2H3 581 aa13.95□□□□□ -0.18
VPS9D1-204ENST00000565023 DCAF4L2Q8NA75 395 aa13.95□□□□□ -0.18
VPS9D1-204ENST00000565023 PIP4K2CQ8TBX8 421 aa13.95□□□□□ -0.18
VPS9D1-204ENST00000565023 SLC6A18Q96N87 628 aa13.95□□□□□ -0.18
VPS9D1-204ENST00000565023 CAMK1GQ96NX5 476 aa13.95□□□□□ -0.18
VPS9D1-204ENST00000565023 PCED1AQ9H1Q7 454 aa13.95□□□□□ -0.18
VPS9D1-204ENST00000565023 GAREM1Q9H706 876 aa13.95□□□□□ -0.18
VPS9D1-204ENST00000565023 NDFIP2Q9NV92 336 aa13.95□□□□□ -0.18
VPS9D1-204ENST00000565023 BZW2Q9Y6E2 419 aaKnown RBP13.95□□□□□ -0.18
VPS9D1-204ENST00000565023 KNL1Q8NG31 2342 aa13.95□□□□□ -0.18
VPS9D1-204ENST00000565023 PCNX2A6NKB5 2137 aa13.94□□□□□ -0.18
VPS9D1-204ENST00000565023 C1QTNF3-AMACRE9PGA6 284 aa13.94□□□□□ -0.18
VPS9D1-204ENST00000565023 KPNA3O00505 521 aaPredicted RBP13.94□□□□□ -0.18
VPS9D1-204ENST00000565023 CREB3O43889 395 aa13.94□□□□□ -0.18
VPS9D1-204ENST00000565023 SH3BP5O60239 455 aa13.94□□□□□ -0.18
VPS9D1-204ENST00000565023 RTN2O75298 545 aa13.94□□□□□ -0.18
VPS9D1-204ENST00000565023 LRIG2O94898 1065 aa13.94□□□□□ -0.18
VPS9D1-204ENST00000565023 IGHV4-34P06331 123 aa13.94□□□□□ -0.18
VPS9D1-204ENST00000565023 PLEKP08567 350 aaPredicted RBP13.94□□□□□ -0.18
VPS9D1-204ENST00000565023 GOT1P17174 413 aa13.94□□□□□ -0.18
VPS9D1-204ENST00000565023 CSRP1P21291 193 aaKnown RBP13.94□□□□□ -0.18
VPS9D1-204ENST00000565023 CD27P26842 260 aa13.94□□□□□ -0.18
VPS9D1-204ENST00000565023 MAT2AP31153 395 aaKnown RBP13.94□□□□□ -0.18
VPS9D1-204ENST00000565023 HNRNPH3P31942 346 aaKnown RBP13.94□□□□□ -0.18
VPS9D1-204ENST00000565023 DRD3P35462 400 aa13.94□□□□□ -0.18
VPS9D1-204ENST00000565023 ACVRL1P37023 503 aa13.94□□□□□ -0.18
VPS9D1-204ENST00000565023 ADPRHP54922 357 aa13.94□□□□□ -0.18
VPS9D1-204ENST00000565023 GSCP56915 257 aaPredicted RBP13.94□□□□□ -0.18
VPS9D1-204ENST00000565023 SEMA3BQ13214 749 aa13.94□□□□□ -0.18
VPS9D1-204ENST00000565023 TEAD4Q15561 434 aa13.94□□□□□ -0.18
VPS9D1-204ENST00000565023 ST3GAL2Q16842 350 aa13.94□□□□□ -0.18
VPS9D1-204ENST00000565023 KIF19Q2TAC6 998 aa13.94□□□□□ -0.18
VPS9D1-204ENST00000565023 FAM46CQ5VWP2 391 aa13.94□□□□□ -0.18
VPS9D1-204ENST00000565023 C22orf39Q6P5X5 142 aa13.94□□□□□ -0.18
VPS9D1-204ENST00000565023 SLFN11Q7Z7L1 901 aa13.94□□□□□ -0.18
VPS9D1-204ENST00000565023 DSG4Q86SJ6 1040 aa13.94□□□□□ -0.18
VPS9D1-204ENST00000565023 CHST14Q8NCH0 376 aa13.94□□□□□ -0.18
VPS9D1-204ENST00000565023 OR2T34Q8NGX1 318 aa13.94□□□□□ -0.18
VPS9D1-204ENST00000565023 GRIN3AQ8TCU5 1115 aa13.94□□□□□ -0.18
VPS9D1-204ENST00000565023 TBC1D31Q96DN5 1066 aa13.94□□□□□ -0.18
VPS9D1-204ENST00000565023 TRIM5Q9C035 493 aa13.94□□□□□ -0.18
VPS9D1-204ENST00000565023 AASDHPPTQ9NRN7 309 aa13.94□□□□□ -0.18
VPS9D1-204ENST00000565023 TMEM51Q9NW97 253 aa13.94□□□□□ -0.18
VPS9D1-204ENST00000565023 FZD4Q9ULV1 537 aa13.94□□□□□ -0.18
VPS9D1-204ENST00000565023 FARP1Q9Y4F1 1045 aaPredicted RBP13.94□□□□□ -0.18
VPS9D1-204ENST00000565023 SNX11Q9Y5W9 270 aa13.94□□□□□ -0.18
VPS9D1-204ENST00000565023 SPEGQ15772 3267 aa13.93□□□□□ -0.18
VPS9D1-204ENST00000565023 ILVBLA1L0T0 632 aa13.93□□□□□ -0.18
VPS9D1-204ENST00000565023 DDX3XO00571 662 aaKnown RBP eCLIP13.93□□□□□ -0.18
VPS9D1-204ENST00000565023 CER1O95813 267 aa13.93□□□□□ -0.18
VPS9D1-204ENST00000565023 TOP3BO95985 862 aaKnown RBP13.93□□□□□ -0.18
VPS9D1-204ENST00000565023 SERPING1P05155 500 aa13.93□□□□□ -0.18
VPS9D1-204ENST00000565023 GZMAP12544 262 aa13.93□□□□□ -0.18
VPS9D1-204ENST00000565023 CEACAM1P13688 526 aa13.93□□□□□ -0.18
VPS9D1-204ENST00000565023 CD59P13987 128 aa13.93□□□□□ -0.18
VPS9D1-204ENST00000565023 SPINK2P20155 84 aa13.93□□□□□ -0.18
VPS9D1-204ENST00000565023 PSMA2P25787 234 aa13.93□□□□□ -0.18
VPS9D1-204ENST00000565023 CHRNA3P32297 505 aa13.93□□□□□ -0.18
VPS9D1-204ENST00000565023 RECQLP46063 649 aaPredicted RBP13.93□□□□□ -0.18
VPS9D1-204ENST00000565023 AFF3P51826 1226 aaKnown RBP13.93□□□□□ -0.18
VPS9D1-204ENST00000565023 PPP2CBP62714 309 aa13.93□□□□□ -0.18
VPS9D1-204ENST00000565023 PPP2CAP67775 309 aa13.93□□□□□ -0.18
VPS9D1-204ENST00000565023 SIM1P81133 766 aaPredicted RBP13.93□□□□□ -0.18
VPS9D1-204ENST00000565023 IL9RQ01113 521 aa13.93□□□□□ -0.18
VPS9D1-204ENST00000565023 OGDHQ02218 1023 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms