RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 SHROOM3Q8TF72 1996 aa19.93■□□□□ 0.78
CLN6-205ENST00000564846 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.93■□□□□ 0.78
CLN6-205ENST00000564846 TRAV19A0A0A6YYK7 116 aa19.93■□□□□ 0.78
CLN6-205ENST00000564846 GRM6O15303 877 aa19.93■□□□□ 0.78
CLN6-205ENST00000564846 GREM1O60565 184 aa19.93■□□□□ 0.78
CLN6-205ENST00000564846 CKMP06732 381 aa19.93■□□□□ 0.78
CLN6-205ENST00000564846 MYOGP15173 224 aa19.93■□□□□ 0.78
CLN6-205ENST00000564846 PGAM1P18669 254 aa19.93■□□□□ 0.78
CLN6-205ENST00000564846 NPY2RP49146 381 aa19.93■□□□□ 0.78
CLN6-205ENST00000564846 GNA12Q03113 381 aa19.93■□□□□ 0.78
CLN6-205ENST00000564846 ZNF177Q13360 481 aaPredicted RBP19.93■□□□□ 0.78
CLN6-205ENST00000564846 CAMK1Q14012 370 aa19.93■□□□□ 0.78
CLN6-205ENST00000564846 EFTUD2Q15029 972 aaKnown RBP eCLIP19.93■□□□□ 0.78
CLN6-205ENST00000564846 KBTBD12Q3ZCT8 623 aa19.93■□□□□ 0.78
CLN6-205ENST00000564846 SETD3Q86TU7 594 aaPredicted RBP19.93■□□□□ 0.78
CLN6-205ENST00000564846 ADAMTS19Q8TE59 1207 aa19.93■□□□□ 0.78
CLN6-205ENST00000564846 SLC22A17Q8WUG5 538 aa19.93■□□□□ 0.78
CLN6-205ENST00000564846 SLC25A51Q9H1U9 297 aa19.93■□□□□ 0.78
CLN6-205ENST00000564846 UBP1Q9NZI7 540 aa19.93■□□□□ 0.78
CLN6-205ENST00000564846 ZKSCAN7Q9P0L1 754 aaPredicted RBP19.93■□□□□ 0.78
CLN6-205ENST00000564846 SENP1Q9P0U3 644 aa19.93■□□□□ 0.78
CLN6-205ENST00000564846 IKBKGQ9Y6K9 419 aa19.93■□□□□ 0.78
CLN6-205ENST00000564846 A0A1W2PRU2 124 aa19.92■□□□□ 0.78
CLN6-205ENST00000564846 ILVBLA1L0T0 632 aa19.92■□□□□ 0.78
CLN6-205ENST00000564846 CCL16O15467 120 aa19.92■□□□□ 0.78
CLN6-205ENST00000564846 PRAMEF11O60813 436 aa19.92■□□□□ 0.78
CLN6-205ENST00000564846 USP12O75317 370 aa19.92■□□□□ 0.78
CLN6-205ENST00000564846 ARHGEF15O94989 841 aa19.92■□□□□ 0.78
CLN6-205ENST00000564846 MYL4P12829 197 aa19.92■□□□□ 0.78
CLN6-205ENST00000564846 HOXA9P31269 272 aa19.92■□□□□ 0.78
CLN6-205ENST00000564846 IRS1P35568 1242 aa19.92■□□□□ 0.78
CLN6-205ENST00000564846 ACVRL1P37023 503 aa19.92■□□□□ 0.78
CLN6-205ENST00000564846 SLC10A7Q0GE19 358 aa19.92■□□□□ 0.78
CLN6-205ENST00000564846 CDH17Q12864 832 aa19.92■□□□□ 0.78
CLN6-205ENST00000564846 C9orf50Q5SZB4 431 aa19.92■□□□□ 0.78
CLN6-205ENST00000564846 Q6ZNB5 142 aa19.92■□□□□ 0.78
CLN6-205ENST00000564846 MAB21L3Q8N8X9 362 aa19.92■□□□□ 0.78
CLN6-205ENST00000564846 SPATA22Q8NHS9 363 aa19.92■□□□□ 0.78
CLN6-205ENST00000564846 SLC44A1Q8WWI5 657 aa19.92■□□□□ 0.78
CLN6-205ENST00000564846 ZNF599Q96NL3 588 aa19.92■□□□□ 0.78
CLN6-205ENST00000564846 SELENOSQ9BQE4 189 aa19.92■□□□□ 0.78
CLN6-205ENST00000564846 MAN1C1Q9NR34 630 aa19.92■□□□□ 0.78
CLN6-205ENST00000564846 SYBUQ9NX95 663 aa19.92■□□□□ 0.78
CLN6-205ENST00000564846 SAMD15Q9P1V8 674 aa19.92■□□□□ 0.78
CLN6-205ENST00000564846 LSM7Q9UK45 103 aaKnown RBP19.92■□□□□ 0.78
CLN6-205ENST00000564846 C1QAP02745 245 aa19.91■□□□□ 0.78
CLN6-205ENST00000564846 CA3P07451 260 aa19.91■□□□□ 0.78
CLN6-205ENST00000564846 EPHA5P54756 1037 aa19.91■□□□□ 0.78
CLN6-205ENST00000564846 SPRED2Q7Z698 418 aa19.91■□□□□ 0.78
CLN6-205ENST00000564846 LRRC6Q86X45 466 aa19.91■□□□□ 0.78
CLN6-205ENST00000564846 FAM217AQ8IXS0 508 aa19.91■□□□□ 0.78
CLN6-205ENST00000564846 MRRFQ96E11 262 aaKnown RBP19.91■□□□□ 0.78
CLN6-205ENST00000564846 TGS1Q96RS0 853 aaKnown RBP19.91■□□□□ 0.78
CLN6-205ENST00000564846 HAUS2Q9NVX0 235 aa19.91■□□□□ 0.78
CLN6-205ENST00000564846 PIH1D1Q9NWS0 290 aaKnown RBP19.91■□□□□ 0.78
CLN6-205ENST00000564846 ZNF510Q9Y2H8 683 aa19.91■□□□□ 0.78
CLN6-205ENST00000564846 TBC1D30Q9Y2I9 924 aa19.91■□□□□ 0.78
CLN6-205ENST00000564846 A0A0D9SEW6 157 aa19.9■□□□□ 0.78
CLN6-205ENST00000564846 MAGEB16A2A368 324 aa19.9■□□□□ 0.78
CLN6-205ENST00000564846 TYW5A2RUC4 315 aaKnown RBP19.9■□□□□ 0.78
CLN6-205ENST00000564846 GRXCR1A8MXD5 290 aa19.9■□□□□ 0.78
CLN6-205ENST00000564846 ALDH1A2O94788 518 aa19.9■□□□□ 0.78
CLN6-205ENST00000564846 POLBP06746 335 aa19.9■□□□□ 0.78
CLN6-205ENST00000564846 RHOCP08134 193 aa19.9■□□□□ 0.78
CLN6-205ENST00000564846 KRT15P19012 456 aa19.9■□□□□ 0.78
CLN6-205ENST00000564846 SGSHP51688 502 aa19.9■□□□□ 0.78
CLN6-205ENST00000564846 GNGT1P63211 74 aa19.9■□□□□ 0.78
CLN6-205ENST00000564846 CRADDP78560 199 aa19.9■□□□□ 0.78
CLN6-205ENST00000564846 ZXDBP98169 803 aa19.9■□□□□ 0.78
CLN6-205ENST00000564846 GUCY1A3Q02108 690 aa19.9■□□□□ 0.78
CLN6-205ENST00000564846 MPP3Q13368 585 aa19.9■□□□□ 0.78
CLN6-205ENST00000564846 OLIG2Q13516 323 aa19.9■□□□□ 0.78
CLN6-205ENST00000564846 LBRQ14739 615 aaKnown RBP19.9■□□□□ 0.78
CLN6-205ENST00000564846 TMCO4Q5TGY1 634 aa19.9■□□□□ 0.78
CLN6-205ENST00000564846 PRPF39Q86UA1 669 aaKnown RBP19.9■□□□□ 0.78
CLN6-205ENST00000564846 TRABD2AQ86V40 505 aa19.9■□□□□ 0.78
CLN6-205ENST00000564846 DCAKDQ8WVC6 231 aa19.9■□□□□ 0.78
CLN6-205ENST00000564846 TBL1YQ9BQ87 522 aa19.9■□□□□ 0.78
CLN6-205ENST00000564846 IL22Q9GZX6 179 aa19.9■□□□□ 0.78
CLN6-205ENST00000564846 PDFQ9HBH1 243 aa19.9■□□□□ 0.78
CLN6-205ENST00000564846 NT5MQ9NPB1 228 aa19.9■□□□□ 0.78
CLN6-205ENST00000564846 VPS45Q9NRW7 570 aa19.9■□□□□ 0.78
CLN6-205ENST00000564846 OBSL1O75147 1896 aa19.9■□□□□ 0.78
CLN6-205ENST00000564846 TSPAN3O60637 253 aa19.9■□□□□ 0.78
CLN6-205ENST00000564846 CLASP2O75122 1294 aaKnown RBP19.9■□□□□ 0.78
CLN6-205ENST00000564846 MT-CYBP00156 380 aaPredicted RBP19.9■□□□□ 0.78
CLN6-205ENST00000564846 INHBAP08476 426 aa19.9■□□□□ 0.78
CLN6-205ENST00000564846 HNRNPA1P09651 372 aaKnown RBP eCLIP19.9■□□□□ 0.78
CLN6-205ENST00000564846 PTPN2P17706 415 aa19.9■□□□□ 0.78
CLN6-205ENST00000564846 DDX6P26196 483 aaKnown RBP eCLIP19.9■□□□□ 0.78
CLN6-205ENST00000564846 ETFBP38117 255 aa19.9■□□□□ 0.78
CLN6-205ENST00000564846 ZNF783Q6ZMS7 281 aa19.9■□□□□ 0.78
CLN6-205ENST00000564846 HTR3DQ70Z44 454 aa19.9■□□□□ 0.78
CLN6-205ENST00000564846 SLC26A11Q86WA9 606 aa19.9■□□□□ 0.78
CLN6-205ENST00000564846 SRRM1Q8IYB3 904 aaKnown RBP19.9■□□□□ 0.78
CLN6-205ENST00000564846 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.9■□□□□ 0.78
CLN6-205ENST00000564846 HJURPQ8NCD3 748 aaPredicted RBP19.9■□□□□ 0.78
CLN6-205ENST00000564846 TTC17Q96AE7 1141 aa19.9■□□□□ 0.78
CLN6-205ENST00000564846 IMP4Q96G21 291 aaKnown RBP19.9■□□□□ 0.78
CLN6-205ENST00000564846 MOCS1Q9NZB8 636 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms