RNA–Protein interactions for RNA: ENST00000564845.5

CHD9-213, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD9, Length 11,504 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-213ENST00000564845 MROH9Q5TGP6 573 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 PDCD6IPQ8WUM4 868 aaKnown RBP3.41□□□□□ -1.86
CHD9-213ENST00000564845 DNAJC9Q8WXX5 260 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 SLC24A3Q9HC58 644 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 PCDH18Q9HCL0 1135 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 ARMCX1Q9P291 453 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 ZMYND8Q9ULU4 1186 aaPredicted RBP3.41□□□□□ -1.86
CHD9-213ENST00000564845 IFRD1O00458 451 aaPredicted RBP3.41□□□□□ -1.86
CHD9-213ENST00000564845 EXTL3O43909 919 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 CLASP2O75122 1294 aaKnown RBP3.41□□□□□ -1.86
CHD9-213ENST00000564845 CNOT3O75175 753 aaKnown RBP3.41□□□□□ -1.86
CHD9-213ENST00000564845 OXSR1O95747 527 aaPredicted RBP3.41□□□□□ -1.86
CHD9-213ENST00000564845 ZBED1O96006 694 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 MYOGP15173 224 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 KCNK10P57789 538 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 XRCC4Q13426 336 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 PTK6Q13882 451 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 ARHGEF7Q14155 803 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 BBS9Q3SYG4 887 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 TTC39BQ5VTQ0 682 aaPredicted RBP3.41□□□□□ -1.86
CHD9-213ENST00000564845 OTOP2Q7RTS6 562 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 TMIEQ8NEW7 156 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 TRPC4APQ8TEL6 797 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 NRDE2Q9H7Z3 1164 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 TMLHEQ9NVH6 421 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 DMAC2Q9NW81 257 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 ZNF711Q9Y462 761 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 ST14Q9Y5Y6 855 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 UBA6A0AVT1 1052 aaPredicted RBP3.41□□□□□ -1.86
CHD9-213ENST00000564845 SLC22A2O15244 555 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 PTGS2P35354 604 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 PMS2P54278 862 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 SESN3P58005 492 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 CDR2Q01850 454 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 PDIA2Q13087 525 aaKnown RBP3.41□□□□□ -1.86
CHD9-213ENST00000564845 VEPH1Q14D04 833 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 ARHGAP15Q53QZ3 475 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 TRMT10BQ6PF06 316 aaKnown RBP3.41□□□□□ -1.86
CHD9-213ENST00000564845 C16orf59Q7L2K0 433 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 RNF148Q8N7C7 305 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 ATAD1Q8NBU5 361 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 HIPK4Q8NE63 616 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 GLMNQ92990 594 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 FUBP1Q96AE4 644 aaKnown RBP3.41□□□□□ -1.86
CHD9-213ENST00000564845 PHF21AQ96BD5 680 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 RPL10LQ96L21 214 aaKnown RBP3.41□□□□□ -1.86
CHD9-213ENST00000564845 KLHL5Q96PQ7 755 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 BUD13Q9BRD0 619 aaKnown RBP eCLIP3.41□□□□□ -1.863e-6■■■□□ 19.2
CHD9-213ENST00000564845 ZNF556Q9HAH1 456 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 MOV10Q9HCE1 1003 aaKnown RBP3.41□□□□□ -1.86
CHD9-213ENST00000564845 TMEM8AQ9HCN3 771 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 POLE4Q9NR33 117 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 MKS1Q9NXB0 559 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 KLHL42Q9P2K6 505 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 ARHGAP28Q9P2N2 729 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 MRTO4Q9UKD2 239 aaKnown RBP3.41□□□□□ -1.86
CHD9-213ENST00000564845 L3MBTL1Q9Y468 752 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 PCDHGB3Q9Y5G1 929 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 CDY2AQ9Y6F7 541 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 CDY1Q9Y6F8 540 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 RFXAPO00287 272 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 RTN2O75298 545 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 APOEP02649 317 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 PDGFRAP16234 1089 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 ZNF24P17028 368 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 GCSHP23434 173 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 RPA3P35244 121 aaPredicted RBP3.41□□□□□ -1.86
CHD9-213ENST00000564845 NUP107P57740 925 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 TUBA4AP68366 448 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 ZNF844Q08AG5 666 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 STX3Q13277 289 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 SNAPC2Q13487 334 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 IRAK1BP1Q5VVH5 260 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 OSTM1Q86WC4 334 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 RIOX2Q8IUF8 465 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 PLD6Q8N2A8 252 aaKnown RBP3.41□□□□□ -1.86
CHD9-213ENST00000564845 PPP1R16AQ96I34 528 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 MBD2Q9UBB5 411 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 LRFN2Q9ULH4 789 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 SOBPA7XYQ1 873 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 H0Y626 953 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 SH3BGRLO75368 114 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 TRIM16O95361 564 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 CALB2P22676 271 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 ELF1P32519 619 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 LRRC36Q1X8D7 754 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 ARHGAP11AQ6P4F7 1023 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 ZDHHC24Q6UX98 284 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 ATG14Q6ZNE5 492 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 FAM71AQ8IYT1 594 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 ATP11CQ8NB49 1132 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 EXT2Q93063 718 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 TP53INP1Q96A56 240 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 SGF29Q96ES7 293 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 HBEGFQ99075 208 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 THG1LQ9NWX6 298 aaKnown RBP3.41□□□□□ -1.86
CHD9-213ENST00000564845 DNAJC28Q9NX36 388 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 SMPD4Q9NXE4 827 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 TLK1Q9UKI8 766 aa3.41□□□□□ -1.86
CHD9-213ENST00000564845 SESN1Q9Y6P5 492 aa3.41□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms